RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
RPRD1A-202ENST00000399022 RRP7BPQ9NSQ0 103 aa19.97■□□□□ 0.79
RPRD1A-202ENST00000399022 ZBTB47Q9UFB7 747 aaPredicted RBP19.96■□□□□ 0.79
RPRD1A-202ENST00000399022 SIN3AQ96ST3 1273 aa19.96■□□□□ 0.79
RPRD1A-202ENST00000399022 CUX2O14529 1486 aa19.94■□□□□ 0.78
RPRD1A-202ENST00000399022 FAM9BQ8IZU0 186 aa19.91■□□□□ 0.78
RPRD1A-202ENST00000399022 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
RPRD1A-202ENST00000399022 CARMIL1Q5VZK9 1371 aa19.89■□□□□ 0.78
RPRD1A-202ENST00000399022 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.77
RPRD1A-202ENST00000399022 RAPGEF2Q9Y4G8 1499 aa19.89■□□□□ 0.77
RPRD1A-202ENST00000399022 CCNB3Q8WWL7 1395 aa19.88■□□□□ 0.77
RPRD1A-202ENST00000399022 SMARCA2P51531 1590 aa19.88■□□□□ 0.77
RPRD1A-202ENST00000399022 RTN4Q9NQC3 1192 aaKnown RBP19.86■□□□□ 0.77
RPRD1A-202ENST00000399022 DEKP35659 375 aaKnown RBP19.85■□□□□ 0.77
RPRD1A-202ENST00000399022 CCDC136Q96JN2 1154 aa19.85■□□□□ 0.77
RPRD1A-202ENST00000399022 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
RPRD1A-202ENST00000399022 KDM2AQ9Y2K7 1162 aa19.72■□□□□ 0.75
RPRD1A-202ENST00000399022 NOP58Q9Y2X3 529 aaKnown RBP19.71■□□□□ 0.75
RPRD1A-202ENST00000399022 MRS2Q9HD23 443 aa19.7■□□□□ 0.74
RPRD1A-202ENST00000399022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.742e-7■■■□□ 16.7
RPRD1A-202ENST00000399022 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
RPRD1A-202ENST00000399022 EIF4G2P78344 907 aaKnown RBP eCLIP19.68■□□□□ 0.743e-10■■■■■ 43
RPRD1A-202ENST00000399022 SALL2Q9Y467 1007 aaPredicted RBP19.67■□□□□ 0.74
RPRD1A-202ENST00000399022 TDRD9Q8NDG6 1382 aaKnown RBP19.66■□□□□ 0.74
RPRD1A-202ENST00000399022 SENP3-EIF4A1A0A087X0R7 540 aa19.65■□□□□ 0.74
RPRD1A-202ENST00000399022 TSPY4P0CV99 314 aa19.65■□□□□ 0.74
RPRD1A-202ENST00000399022 TSPY10P0CW01 314 aa19.65■□□□□ 0.74
RPRD1A-202ENST00000399022 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
RPRD1A-202ENST00000399022 PPP4R2Q9NY27 417 aa19.65■□□□□ 0.74
RPRD1A-202ENST00000399022 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
RPRD1A-202ENST00000399022 GLIPR1L2Q4G1C9 344 aa19.64■□□□□ 0.73
RPRD1A-202ENST00000399022 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
RPRD1A-202ENST00000399022 KCNH8Q96L42 1107 aa19.62■□□□□ 0.73
RPRD1A-202ENST00000399022 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
RPRD1A-202ENST00000399022 CFDP1Q9UEE9 299 aaPredicted RBP19.58■□□□□ 0.73
RPRD1A-202ENST00000399022 LAS1LQ9Y4W2 734 aaKnown RBP19.58■□□□□ 0.73
RPRD1A-202ENST00000399022 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
RPRD1A-202ENST00000399022 FHOD3Q2V2M9 1422 aa19.56■□□□□ 0.72
RPRD1A-202ENST00000399022 TMC1Q8TDI8 760 aa19.56■□□□□ 0.72
RPRD1A-202ENST00000399022 NEFMP07197 916 aa19.55■□□□□ 0.72
RPRD1A-202ENST00000399022 ARXQ96QS3 562 aa19.55■□□□□ 0.72
RPRD1A-202ENST00000399022 PLEKHD1A6NEE1 506 aa19.54■□□□□ 0.72
RPRD1A-202ENST00000399022 DHX57Q6P158 1386 aaKnown RBP19.54■□□□□ 0.72
RPRD1A-202ENST00000399022 FOXD1Q16676 465 aa19.52■□□□□ 0.72
RPRD1A-202ENST00000399022 ARHGAP35Q9NRY4 1499 aa19.51■□□□□ 0.71
RPRD1A-202ENST00000399022 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.51■□□□□ 0.71
RPRD1A-202ENST00000399022 RGL3Q3MIN7 710 aa19.51■□□□□ 0.71
RPRD1A-202ENST00000399022 CHGAP10645 457 aaKnown RBP19.49■□□□□ 0.71
RPRD1A-202ENST00000399022 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
RPRD1A-202ENST00000399022 CCER2I3L3R5 266 aa19.46■□□□□ 0.71
RPRD1A-202ENST00000399022 IGF1RP08069 1367 aa19.45■□□□□ 0.7
RPRD1A-202ENST00000399022 PPM1GO15355 546 aaPredicted RBP19.43■□□□□ 0.7
RPRD1A-202ENST00000399022 KIF21BO75037 1637 aa19.43■□□□□ 0.7
RPRD1A-202ENST00000399022 TIMELESSQ9UNS1 1208 aa19.41■□□□□ 0.7
RPRD1A-202ENST00000399022 PPP1R15AO75807 674 aaPredicted RBP19.41■□□□□ 0.7
RPRD1A-202ENST00000399022 FMN1Q68DA7 1419 aa19.39■□□□□ 0.7
RPRD1A-202ENST00000399022 CANXP27824 592 aaKnown RBP19.38■□□□□ 0.69
RPRD1A-202ENST00000399022 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
RPRD1A-202ENST00000399022 HSPA5P11021 654 aaKnown RBP19.37■□□□□ 0.69
RPRD1A-202ENST00000399022 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
RPRD1A-202ENST00000399022 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
RPRD1A-202ENST00000399022 DDRGK1Q96HY6 314 aa19.35■□□□□ 0.69
RPRD1A-202ENST00000399022 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
RPRD1A-202ENST00000399022 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
RPRD1A-202ENST00000399022 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
RPRD1A-202ENST00000399022 FANCIQ9NVI1 1328 aa19.34■□□□□ 0.69
RPRD1A-202ENST00000399022 ARAP1Q96P48 1450 aa19.33■□□□□ 0.68
RPRD1A-202ENST00000399022 RAD54L2Q9Y4B4 1467 aa19.33■□□□□ 0.68
RPRD1A-202ENST00000399022 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.68
RPRD1A-202ENST00000399022 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
RPRD1A-202ENST00000399022 MPHOSPH9Q99550 1183 aa19.32■□□□□ 0.68
RPRD1A-202ENST00000399022 PRKCSHP14314 528 aaPredicted RBP19.3■□□□□ 0.68
RPRD1A-202ENST00000399022 NPM1P06748 294 aaKnown RBP eCLIP19.26■□□□□ 0.67
RPRD1A-202ENST00000399022 PHLDB1Q86UU1 1377 aa19.26■□□□□ 0.67
RPRD1A-202ENST00000399022 L3MBTL2Q969R5 705 aa19.26■□□□□ 0.67
RPRD1A-202ENST00000399022 UPF2Q9HAU5 1272 aaKnown RBP19.26■□□□□ 0.67
RPRD1A-202ENST00000399022 PKD2Q13563 968 aa19.25■□□□□ 0.67
RPRD1A-202ENST00000399022 DCAF11Q8TEB1 546 aa19.25■□□□□ 0.67
RPRD1A-202ENST00000399022 IPO9Q96P70 1041 aaKnown RBP19.25■□□□□ 0.67
RPRD1A-202ENST00000399022 ANO8Q9HCE9 1232 aaPredicted RBP19.23■□□□□ 0.67
RPRD1A-202ENST00000399022 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
RPRD1A-202ENST00000399022 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.67
RPRD1A-202ENST00000399022 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
RPRD1A-202ENST00000399022 ANP32BQ92688 251 aaKnown RBP19.21■□□□□ 0.67
RPRD1A-202ENST00000399022 NAP1L5Q96NT1 182 aaPredicted RBP19.21■□□□□ 0.67
RPRD1A-202ENST00000399022 CFTRP13569 1480 aa19.2■□□□□ 0.66
RPRD1A-202ENST00000399022 CUX1P39880 1505 aa19.18■□□□□ 0.66
RPRD1A-202ENST00000399022 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
RPRD1A-202ENST00000399022 HSP90AA1P07900 732 aaKnown RBP19.16■□□□□ 0.66
RPRD1A-202ENST00000399022 ERICH3Q5RHP9 1530 aa19.14■□□□□ 0.65
RPRD1A-202ENST00000399022 LRRC9Q6ZRR7 1453 aa19.14■□□□□ 0.65
RPRD1A-202ENST00000399022 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.14■□□□□ 0.65
RPRD1A-202ENST00000399022 STAG3Q9UJ98 1225 aa19.13■□□□□ 0.65
RPRD1A-202ENST00000399022 CC2D1BQ5T0F9 858 aaKnown RBP19.13■□□□□ 0.65
RPRD1A-202ENST00000399022 NUP155O75694 1391 aa19.1■□□□□ 0.65
RPRD1A-202ENST00000399022 NESP48681 1621 aa19.1■□□□□ 0.65
RPRD1A-202ENST00000399022 CCDC18Q5T9S5 1454 aa19.1■□□□□ 0.65
RPRD1A-202ENST00000399022 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
RPRD1A-202ENST00000399022 RGS3P49796 1198 aa19.09■□□□□ 0.65
RPRD1A-202ENST00000399022 BECN1Q14457 450 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms