RNA–Protein interactions for RNA: ENST00000398888.6

USP19-202, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP19, Length 4,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-202ENST00000398888 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
USP19-202ENST00000398888 HSP90AA2PQ14568 343 aaPredicted RBP17.69■□□□□ 0.42
USP19-202ENST00000398888 SALL2Q9Y467 1007 aaPredicted RBP17.68■□□□□ 0.42
USP19-202ENST00000398888 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
USP19-202ENST00000398888 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
USP19-202ENST00000398888 UPF2Q9HAU5 1272 aaKnown RBP17.67■□□□□ 0.42
USP19-202ENST00000398888 TIMELESSQ9UNS1 1208 aa17.66■□□□□ 0.42
USP19-202ENST00000398888 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
USP19-202ENST00000398888 FAM9BQ8IZU0 186 aa17.63■□□□□ 0.41
USP19-202ENST00000398888 GOLGA3Q08378 1498 aa17.62■□□□□ 0.41
USP19-202ENST00000398888 PPP4R2Q9NY27 417 aa17.6■□□□□ 0.41
USP19-202ENST00000398888 CLIP1P30622 1438 aa17.6■□□□□ 0.41
USP19-202ENST00000398888 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
USP19-202ENST00000398888 NACADO15069 1562 aa17.52■□□□□ 0.4
USP19-202ENST00000398888 BECN1Q14457 450 aa17.5■□□□□ 0.39
USP19-202ENST00000398888 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
USP19-202ENST00000398888 DNTTIP2Q5QJE6 756 aaKnown RBP17.5■□□□□ 0.39
USP19-202ENST00000398888 B4GALNT3Q6L9W6 998 aa17.5■□□□□ 0.39
USP19-202ENST00000398888 UBE2Q2Q8WVN8 375 aa17.49■□□□□ 0.39
USP19-202ENST00000398888 CECR2Q9BXF3 1484 aa17.46■□□□□ 0.39
USP19-202ENST00000398888 ARID3AQ99856 593 aa17.46■□□□□ 0.39
USP19-202ENST00000398888 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
USP19-202ENST00000398888 BAZ1AQ9NRL2 1556 aaPredicted RBP17.43■□□□□ 0.38
USP19-202ENST00000398888 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
USP19-202ENST00000398888 MRS2Q9HD23 443 aa17.41■□□□□ 0.38
USP19-202ENST00000398888 FANCIQ9NVI1 1328 aa17.4■□□□□ 0.38
USP19-202ENST00000398888 PTMAP06454 111 aaKnown RBP17.39■□□□□ 0.37
USP19-202ENST00000398888 IPO9Q96P70 1041 aaKnown RBP17.39■□□□□ 0.37
USP19-202ENST00000398888 IL27Q8NEV9 243 aa17.37■□□□□ 0.37
USP19-202ENST00000398888 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
USP19-202ENST00000398888 USP35Q9P2H5 1018 aa17.35■□□□□ 0.37
USP19-202ENST00000398888 TONSLQ96HA7 1378 aa17.35■□□□□ 0.37
USP19-202ENST00000398888 MSNP26038 577 aaKnown RBP17.35■□□□□ 0.37
USP19-202ENST00000398888 SOGA1O94964 1423 aa17.34■□□□□ 0.37
USP19-202ENST00000398888 GOLGA6L22H0YM25 854 aa17.33■□□□□ 0.36
USP19-202ENST00000398888 ZNF326Q5BKZ1 582 aaKnown RBP17.33■□□□□ 0.36
USP19-202ENST00000398888 TNNT3P45378 269 aaPredicted RBP17.31■□□□□ 0.36
USP19-202ENST00000398888 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.31■□□□□ 0.36
USP19-202ENST00000398888 HIRIP3Q9BW71 556 aaPredicted RBP17.29■□□□□ 0.36
USP19-202ENST00000398888 GSE1Q14687 1217 aa17.28■□□□□ 0.36
USP19-202ENST00000398888 VPS8Q8N3P4 1428 aa17.27■□□□□ 0.35
USP19-202ENST00000398888 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
USP19-202ENST00000398888 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
USP19-202ENST00000398888 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
USP19-202ENST00000398888 TMC1Q8TDI8 760 aa17.24■□□□□ 0.35
USP19-202ENST00000398888 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
USP19-202ENST00000398888 PDE4CQ08493 712 aa17.2■□□□□ 0.34
USP19-202ENST00000398888 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
USP19-202ENST00000398888 GZF1Q9H116 711 aaPredicted RBP17.16■□□□□ 0.34
USP19-202ENST00000398888 WIZO95785 1651 aa17.16■□□□□ 0.34
USP19-202ENST00000398888 CHAF1AQ13111 956 aaPredicted RBP17.14■□□□□ 0.33
USP19-202ENST00000398888 CCNB3Q8WWL7 1395 aa17.14■□□□□ 0.33
USP19-202ENST00000398888 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
USP19-202ENST00000398888 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
USP19-202ENST00000398888 MYH16Q9H6N6 1097 aa17.12■□□□□ 0.33
USP19-202ENST00000398888 RGS3P49796 1198 aa17.11■□□□□ 0.33
USP19-202ENST00000398888 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
USP19-202ENST00000398888 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
USP19-202ENST00000398888 SENP3-EIF4A1A0A087X0R7 540 aa17.08■□□□□ 0.33
USP19-202ENST00000398888 PTMSP20962 102 aa17.07■□□□□ 0.32
USP19-202ENST00000398888 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
USP19-202ENST00000398888 CCER2I3L3R5 266 aa17.07■□□□□ 0.32
USP19-202ENST00000398888 FAM13BQ9NYF5 915 aa17.06■□□□□ 0.32
USP19-202ENST00000398888 ZBTB7CA1YPR0 619 aa17.05■□□□□ 0.32
USP19-202ENST00000398888 TCERG1O14776 1098 aaKnown RBP17.05■□□□□ 0.32
USP19-202ENST00000398888 PLCB2Q00722 1185 aa17.04■□□□□ 0.32
USP19-202ENST00000398888 SLKQ9H2G2 1235 aaPredicted RBP17.04■□□□□ 0.32
USP19-202ENST00000398888 APPP05067 770 aa17.04■□□□□ 0.32
USP19-202ENST00000398888 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
USP19-202ENST00000398888 EIF4G2P78344 907 aaKnown RBP eCLIP17.03■□□□□ 0.32
USP19-202ENST00000398888 MTUS2Q5JR59 1369 aa17.02■□□□□ 0.32
USP19-202ENST00000398888 RRP9O43818 475 aaKnown RBP17.02■□□□□ 0.32
USP19-202ENST00000398888 SIN3AQ96ST3 1273 aa17■□□□□ 0.31
USP19-202ENST00000398888 FAM43AQ8N2R8 423 aa16.99■□□□□ 0.31
USP19-202ENST00000398888 SPRYD3Q8NCJ5 442 aa16.98■□□□□ 0.31
USP19-202ENST00000398888 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
USP19-202ENST00000398888 KANK4Q5T7N3 995 aaPredicted RBP16.96■□□□□ 0.31
USP19-202ENST00000398888 ZNF771Q7L3S4 317 aaPredicted RBP16.96■□□□□ 0.31
USP19-202ENST00000398888 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.31
USP19-202ENST00000398888 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.3
USP19-202ENST00000398888 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
USP19-202ENST00000398888 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
USP19-202ENST00000398888 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
USP19-202ENST00000398888 RUSC2Q8N2Y8 1516 aa16.92■□□□□ 0.3
USP19-202ENST00000398888 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
USP19-202ENST00000398888 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
USP19-202ENST00000398888 CHIC2Q9UKJ5 165 aa16.91■□□□□ 0.3
USP19-202ENST00000398888 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
USP19-202ENST00000398888 MSH5O43196 834 aa16.89■□□□□ 0.3
USP19-202ENST00000398888 PAK3O75914 559 aaPredicted RBP16.89■□□□□ 0.3
USP19-202ENST00000398888 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.3
USP19-202ENST00000398888 HSCBQ8IWL3 235 aa16.89■□□□□ 0.29
USP19-202ENST00000398888 TPRNQ4KMQ1 711 aa16.89■□□□□ 0.29
USP19-202ENST00000398888 RAPGEF2Q9Y4G8 1499 aa16.87■□□□□ 0.29
USP19-202ENST00000398888 GBP4Q96PP9 640 aa16.87■□□□□ 0.29
USP19-202ENST00000398888 KCNH8Q96L42 1107 aa16.86■□□□□ 0.29
USP19-202ENST00000398888 TPM2P07951 284 aa16.86■□□□□ 0.29
USP19-202ENST00000398888 NFKBIBQ15653 356 aa16.86■□□□□ 0.29
USP19-202ENST00000398888 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
USP19-202ENST00000398888 PDE4AP27815 886 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms