RNA–Protein interactions for RNA: ENST00000398888.6

USP19-202, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP19, Length 4,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-202ENST00000398888 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
USP19-202ENST00000398888 PELP1Q8IZL8 1130 aaKnown RBP22.38■■□□□ 1.17
USP19-202ENST00000398888 MYT1Q01538 1121 aa22.22■■□□□ 1.15
USP19-202ENST00000398888 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
USP19-202ENST00000398888 PCGF6Q9BYE7 350 aa20.88■□□□□ 0.93
USP19-202ENST00000398888 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
USP19-202ENST00000398888 DCAF8L2P0C7V8 631 aa20.75■□□□□ 0.91
USP19-202ENST00000398888 ERICH6Q7L0X2 663 aa20.71■□□□□ 0.91
USP19-202ENST00000398888 HRCP23327 699 aa20.59■□□□□ 0.89
USP19-202ENST00000398888 SHROOM4Q9ULL8 1493 aa20.58■□□□□ 0.89
USP19-202ENST00000398888 TTBK1Q5TCY1 1321 aaPredicted RBP20.5■□□□□ 0.87
USP19-202ENST00000398888 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
USP19-202ENST00000398888 CCER1Q8TC90 406 aaPredicted RBP20.38■□□□□ 0.85
USP19-202ENST00000398888 YTHDC1Q96MU7 727 aaKnown RBP20.19■□□□□ 0.82
USP19-202ENST00000398888 PPARGC1BQ86YN6 1023 aaKnown RBP20.15■□□□□ 0.82
USP19-202ENST00000398888 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
USP19-202ENST00000398888 NEFLP07196 543 aa19.9■□□□□ 0.78
USP19-202ENST00000398888 GTF3C3Q9Y5Q9 886 aa19.86■□□□□ 0.77
USP19-202ENST00000398888 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.74
USP19-202ENST00000398888 ACIN1Q9UKV3 1341 aaKnown RBP19.58■□□□□ 0.73
USP19-202ENST00000398888 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
USP19-202ENST00000398888 RTL5Q5HYW3 569 aaPredicted RBP19.52■□□□□ 0.72
USP19-202ENST00000398888 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
USP19-202ENST00000398888 DIEXFQ68CQ4 756 aaKnown RBP19.45■□□□□ 0.7
USP19-202ENST00000398888 FAM9AQ8IZU1 332 aaPredicted RBP19.4■□□□□ 0.7
USP19-202ENST00000398888 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
USP19-202ENST00000398888 BCL11AQ9H165 835 aa19.37■□□□□ 0.69
USP19-202ENST00000398888 EIF5BO60841 1220 aaKnown RBP19.34■□□□□ 0.69
USP19-202ENST00000398888 APLP2Q06481 763 aa19.29■□□□□ 0.68
USP19-202ENST00000398888 DAXXQ9UER7 740 aaPredicted RBP19.21■□□□□ 0.67
USP19-202ENST00000398888 LOC105371045A0A1W2PR82 267 aa19.18■□□□□ 0.66
USP19-202ENST00000398888 BCANQ96GW7 911 aa19.16■□□□□ 0.66
USP19-202ENST00000398888 NEUROD1Q13562 356 aa19.14■□□□□ 0.66
USP19-202ENST00000398888 GLIPR1L2Q4G1C9 344 aa19.14■□□□□ 0.65
USP19-202ENST00000398888 ANP32EQ9BTT0 268 aa19.08■□□□□ 0.65
USP19-202ENST00000398888 MYT1LQ9UL68 1186 aa19.02■□□□□ 0.63
USP19-202ENST00000398888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.96■□□□□ 0.63
USP19-202ENST00000398888 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
USP19-202ENST00000398888 DCAF1Q9Y4B6 1507 aa18.85■□□□□ 0.61
USP19-202ENST00000398888 ZNF316A6NFI3 1004 aaPredicted RBP18.84■□□□□ 0.61
USP19-202ENST00000398888 ZCCHC6Q5VYS8 1495 aaKnown RBP18.81■□□□□ 0.6
USP19-202ENST00000398888 CLSPNQ9HAW4 1339 aa18.79■□□□□ 0.6
USP19-202ENST00000398888 UBTFP17480 764 aaKnown RBP18.75■□□□□ 0.59
USP19-202ENST00000398888 NBR1Q14596 966 aa18.67■□□□□ 0.58
USP19-202ENST00000398888 ANP32AP39687 249 aaKnown RBP18.63■□□□□ 0.57
USP19-202ENST00000398888 PRKCSHP14314 528 aaPredicted RBP18.63■□□□□ 0.57
USP19-202ENST00000398888 MYO15BQ96JP2 1530 aa18.61■□□□□ 0.57
USP19-202ENST00000398888 FKBP8Q14318 412 aa18.58■□□□□ 0.57
USP19-202ENST00000398888 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
USP19-202ENST00000398888 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.55
USP19-202ENST00000398888 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
USP19-202ENST00000398888 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
USP19-202ENST00000398888 CCDC180Q9P1Z9 1646 aa18.47■□□□□ 0.55
USP19-202ENST00000398888 NPM2Q86SE8 214 aaKnown RBP18.38■□□□□ 0.53
USP19-202ENST00000398888 ABCC9O60706 1549 aa18.36■□□□□ 0.53
USP19-202ENST00000398888 ZBTB47Q9UFB7 747 aaPredicted RBP18.36■□□□□ 0.53
USP19-202ENST00000398888 DEKP35659 375 aaKnown RBP18.33■□□□□ 0.52
USP19-202ENST00000398888 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.29■□□□□ 0.52
USP19-202ENST00000398888 ITGAEP38570 1179 aa18.27■□□□□ 0.52
USP19-202ENST00000398888 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.51
USP19-202ENST00000398888 ANP32CO43423 234 aa18.25■□□□□ 0.51
USP19-202ENST00000398888 MIER1Q8N108 512 aa18.24■□□□□ 0.51
USP19-202ENST00000398888 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
USP19-202ENST00000398888 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
USP19-202ENST00000398888 ERICH6BQ5W0A0 696 aa18.17■□□□□ 0.5
USP19-202ENST00000398888 NEFMP07197 916 aa18.16■□□□□ 0.5
USP19-202ENST00000398888 SUPT16HQ9Y5B9 1047 aaKnown RBP18.15■□□□□ 0.5
USP19-202ENST00000398888 ANP32BQ92688 251 aaKnown RBP18.08■□□□□ 0.49
USP19-202ENST00000398888 ARXQ96QS3 562 aa18.08■□□□□ 0.49
USP19-202ENST00000398888 TNNT2P45379 298 aaPredicted RBP18.07■□□□□ 0.48
USP19-202ENST00000398888 NAP1L5Q96NT1 182 aaPredicted RBP18.07■□□□□ 0.48
USP19-202ENST00000398888 ATP1B4Q9UN42 357 aaPredicted RBP18.06■□□□□ 0.48
USP19-202ENST00000398888 RBM19Q9Y4C8 960 aaKnown RBP18.05■□□□□ 0.48
USP19-202ENST00000398888 TSHZ2Q9NRE2 1034 aa18.05■□□□□ 0.48
USP19-202ENST00000398888 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
USP19-202ENST00000398888 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.47
USP19-202ENST00000398888 SCRIBQ14160 1630 aa18■□□□□ 0.47
USP19-202ENST00000398888 NOP58Q9Y2X3 529 aaKnown RBP17.99■□□□□ 0.47
USP19-202ENST00000398888 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
USP19-202ENST00000398888 ANO8Q9HCE9 1232 aaPredicted RBP17.95■□□□□ 0.46
USP19-202ENST00000398888 IRX6P78412 446 aaPredicted RBP17.95■□□□□ 0.46
USP19-202ENST00000398888 HNRNPUQ00839 825 aaKnown RBP eCLIP17.94■□□□□ 0.46
USP19-202ENST00000398888 VSIG10Q8N0Z9 540 aa17.94■□□□□ 0.46
USP19-202ENST00000398888 CDK11BP21127 795 aaKnown RBP17.93■□□□□ 0.46
USP19-202ENST00000398888 PKNOX2Q96KN3 472 aa17.92■□□□□ 0.46
USP19-202ENST00000398888 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
USP19-202ENST00000398888 PODXL2Q9NZ53 605 aa17.91■□□□□ 0.46
USP19-202ENST00000398888 PPM1GO15355 546 aaPredicted RBP17.89■□□□□ 0.46
USP19-202ENST00000398888 TRIM44Q96DX7 344 aaPredicted RBP17.85■□□□□ 0.45
USP19-202ENST00000398888 LAS1LQ9Y4W2 734 aaKnown RBP17.85■□□□□ 0.45
USP19-202ENST00000398888 NCLP19338 710 aaKnown RBP17.81■□□□□ 0.44
USP19-202ENST00000398888 HSP90AA1P07900 732 aaKnown RBP17.81■□□□□ 0.44
USP19-202ENST00000398888 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
USP19-202ENST00000398888 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
USP19-202ENST00000398888 DDX10Q13206 875 aaKnown RBP17.79■□□□□ 0.44
USP19-202ENST00000398888 EEA1Q15075 1411 aa17.76■□□□□ 0.43
USP19-202ENST00000398888 A0A0U1RQG5 324 aaPredicted RBP17.74■□□□□ 0.43
USP19-202ENST00000398888 DDRGK1Q96HY6 314 aa17.74■□□□□ 0.43
USP19-202ENST00000398888 CEP162Q5TB80 1403 aa17.73■□□□□ 0.43
USP19-202ENST00000398888 ARID4BQ4LE39 1312 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms