RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 ARHGEF11O15085 1522 aa6.46□□□□□ -1.38
FNDC3A-202ENST00000398316 ARAP3Q8WWN8 1544 aa6.46□□□□□ -1.38
FNDC3A-202ENST00000398316 ZNF608Q9ULD9 1512 aaPredicted RBP6.46□□□□□ -1.38
FNDC3A-202ENST00000398316 GOLGA3Q08378 1498 aa6.45□□□□□ -1.38
FNDC3A-202ENST00000398316 BCORL1Q5H9F3 1711 aa6.45□□□□□ -1.38
FNDC3A-202ENST00000398316 RAD54L2Q9Y4B4 1467 aa6.45□□□□□ -1.38
FNDC3A-202ENST00000398316 DISP1Q96F81 1524 aa6.44□□□□□ -1.38
FNDC3A-202ENST00000398316 GLI2P10070 1586 aa6.44□□□□□ -1.38
FNDC3A-202ENST00000398316 SNAPC4Q5SXM2 1469 aa6.44□□□□□ -1.38
FNDC3A-202ENST00000398316 TNIKQ9UKE5 1360 aa6.42□□□□□ -1.38
FNDC3A-202ENST00000398316 MAPKBP1O60336 1514 aa6.41□□□□□ -1.38
FNDC3A-202ENST00000398316 CHIC1Q5VXU3 224 aa6.4□□□□□ -1.39
FNDC3A-202ENST00000398316 FYCO1Q9BQS8 1478 aa6.39□□□□□ -1.39
FNDC3A-202ENST00000398316 RAPGEF6Q8TEU7 1601 aa6.38□□□□□ -1.39
FNDC3A-202ENST00000398316 HECW1Q76N89 1606 aa6.38□□□□□ -1.39
FNDC3A-202ENST00000398316 MAP3K4Q9Y6R4 1608 aa6.37□□□□□ -1.39
FNDC3A-202ENST00000398316 CROCC2H7BZ55 1655 aa6.36□□□□□ -1.39
FNDC3A-202ENST00000398316 ARAP1Q96P48 1450 aa6.36□□□□□ -1.39
FNDC3A-202ENST00000398316 ABCA9Q8IUA7 1624 aa6.36□□□□□ -1.39
FNDC3A-202ENST00000398316 ABCC2Q92887 1545 aa6.35□□□□□ -1.39
FNDC3A-202ENST00000398316 RIMBP3CA6NJZ7 1639 aa6.35□□□□□ -1.39
FNDC3A-202ENST00000398316 RIMBP3BA6NNM3 1639 aa6.35□□□□□ -1.39
FNDC3A-202ENST00000398316 RIMBP3Q9UFD9 1639 aa6.35□□□□□ -1.39
FNDC3A-202ENST00000398316 PPRC1Q5VV67 1664 aaKnown RBP6.35□□□□□ -1.39
FNDC3A-202ENST00000398316 ARHGAP35Q9NRY4 1499 aa6.34□□□□□ -1.39
FNDC3A-202ENST00000398316 CFAP74Q9C0B2 1584 aa6.34□□□□□ -1.39
FNDC3A-202ENST00000398316 CCDC18Q5T9S5 1454 aa6.34□□□□□ -1.39
FNDC3A-202ENST00000398316 MAST1Q9Y2H9 1570 aa6.34□□□□□ -1.39
FNDC3A-202ENST00000398316 CARMIL1Q5VZK9 1371 aa6.34□□□□□ -1.4
FNDC3A-202ENST00000398316 ITSN2Q9NZM3 1697 aa6.33□□□□□ -1.4
FNDC3A-202ENST00000398316 REREQ9P2R6 1566 aa6.33□□□□□ -1.4
FNDC3A-202ENST00000398316 ZCCHC11Q5TAX3 1644 aaKnown RBP6.33□□□□□ -1.4
FNDC3A-202ENST00000398316 CASKIN1Q8WXD9 1431 aa6.32□□□□□ -1.4
FNDC3A-202ENST00000398316 FAM135AQ9P2D6 1515 aa6.32□□□□□ -1.4
FNDC3A-202ENST00000398316 KIF13AQ9H1H9 1805 aa6.32□□□□□ -1.4
FNDC3A-202ENST00000398316 WDR7Q9Y4E6 1490 aa6.32□□□□□ -1.4
FNDC3A-202ENST00000398316 TIAM1Q13009 1591 aa6.32□□□□□ -1.4
FNDC3A-202ENST00000398316 PREX2Q70Z35 1606 aa6.32□□□□□ -1.4
FNDC3A-202ENST00000398316 PCF11O94913 1555 aaKnown RBP6.31□□□□□ -1.4
FNDC3A-202ENST00000398316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.31□□□□□ -1.4
FNDC3A-202ENST00000398316 EHBP1L1Q8N3D4 1523 aa6.29□□□□□ -1.4
FNDC3A-202ENST00000398316 CDC42BPAQ5VT25 1732 aa6.29□□□□□ -1.4
FNDC3A-202ENST00000398316 TCOF1Q13428 1488 aaKnown RBP6.29□□□□□ -1.4
FNDC3A-202ENST00000398316 ARHGEF5Q12774 1597 aa6.29□□□□□ -1.4
FNDC3A-202ENST00000398316 ADGBQ8N7X0 1667 aa6.27□□□□□ -1.41
FNDC3A-202ENST00000398316 ZMYM4Q5VZL5 1548 aa6.27□□□□□ -1.41
FNDC3A-202ENST00000398316 FMN1Q68DA7 1419 aa6.27□□□□□ -1.41
FNDC3A-202ENST00000398316 MYO5CQ9NQX4 1742 aa6.27□□□□□ -1.41
FNDC3A-202ENST00000398316 SUPT6HQ7KZ85 1726 aaKnown RBP6.27□□□□□ -1.41
FNDC3A-202ENST00000398316 SUPT5HO00267 1087 aaKnown RBP6.26□□□□□ -1.41
FNDC3A-202ENST00000398316 CDC42BPBQ9Y5S2 1711 aa6.26□□□□□ -1.41
FNDC3A-202ENST00000398316 ABCC10Q5T3U5 1492 aa6.26□□□□□ -1.41
FNDC3A-202ENST00000398316 VPS8Q8N3P4 1428 aa6.26□□□□□ -1.41
FNDC3A-202ENST00000398316 PLXNC1O60486 1568 aa6.26□□□□□ -1.41
FNDC3A-202ENST00000398316 GCC2Q8IWJ2 1684 aa6.26□□□□□ -1.41
FNDC3A-202ENST00000398316 DIP2BQ9P265 1576 aa6.25□□□□□ -1.41
FNDC3A-202ENST00000398316 NUP153P49790 1475 aaKnown RBP6.25□□□□□ -1.41
FNDC3A-202ENST00000398316 ERCC6L2Q5T890 1561 aa6.25□□□□□ -1.41
FNDC3A-202ENST00000398316 NEURL4Q96JN8 1562 aa6.25□□□□□ -1.41
FNDC3A-202ENST00000398316 EIF2AK4Q9P2K8 1649 aaKnown RBP6.25□□□□□ -1.41
FNDC3A-202ENST00000398316 CSRNP3Q8WYN3 585 aa6.25□□□□□ -1.41
FNDC3A-202ENST00000398316 DEPDC5O75140 1603 aa6.25□□□□□ -1.41
FNDC3A-202ENST00000398316 KDM5CP41229 1560 aa6.24□□□□□ -1.41
FNDC3A-202ENST00000398316 AKNAQ7Z591 1439 aa6.24□□□□□ -1.41
FNDC3A-202ENST00000398316 CEP162Q5TB80 1403 aa6.23□□□□□ -1.41
FNDC3A-202ENST00000398316 RICTORQ6R327 1708 aa6.23□□□□□ -1.41
FNDC3A-202ENST00000398316 MAGI3Q5TCQ9 1506 aa6.23□□□□□ -1.41
FNDC3A-202ENST00000398316 TDRD9Q8NDG6 1382 aaKnown RBP6.23□□□□□ -1.41
FNDC3A-202ENST00000398316 SHANK2Q9UPX8 1470 aa6.23□□□□□ -1.41
FNDC3A-202ENST00000398316 INO80Q9ULG1 1556 aaPredicted RBP6.22□□□□□ -1.41
FNDC3A-202ENST00000398316 KDM5AP29375 1690 aaKnown RBP6.21□□□□□ -1.41
FNDC3A-202ENST00000398316 EPRSP07814 1512 aaKnown RBP6.21□□□□□ -1.41
FNDC3A-202ENST00000398316 CARMIL2Q6F5E8 1435 aa6.21□□□□□ -1.42
FNDC3A-202ENST00000398316 KIF14Q15058 1648 aa6.21□□□□□ -1.42
FNDC3A-202ENST00000398316 DNMT1P26358 1616 aaKnown RBP6.21□□□□□ -1.42
FNDC3A-202ENST00000398316 RNF17Q9BXT8 1623 aaKnown RBP6.21□□□□□ -1.42
FNDC3A-202ENST00000398316 KDM5DQ9BY66 1539 aa6.2□□□□□ -1.42
FNDC3A-202ENST00000398316 MAGI2Q86UL8 1455 aa6.2□□□□□ -1.42
FNDC3A-202ENST00000398316 FRMPD1Q5SYB0 1578 aa6.2□□□□□ -1.42
FNDC3A-202ENST00000398316 ADGRL2O95490 1459 aa6.19□□□□□ -1.42
FNDC3A-202ENST00000398316 ZC3H13Q5T200 1668 aaKnown RBP6.19□□□□□ -1.42
FNDC3A-202ENST00000398316 UACAQ9BZF9 1416 aa6.19□□□□□ -1.42
FNDC3A-202ENST00000398316 VWDEQ8N2E2 1590 aa6.19□□□□□ -1.42
FNDC3A-202ENST00000398316 MROH2AA6NES4 1674 aa6.18□□□□□ -1.42
FNDC3A-202ENST00000398316 RRBP1Q9P2E9 1410 aaKnown RBP6.18□□□□□ -1.42
FNDC3A-202ENST00000398316 PHLDB1Q86UU1 1377 aa6.18□□□□□ -1.42
FNDC3A-202ENST00000398316 CLIP1P30622 1438 aa6.18□□□□□ -1.42
FNDC3A-202ENST00000398316 MIA2Q96PC5 1412 aa6.18□□□□□ -1.42
FNDC3A-202ENST00000398316 UNC13BO14795 1591 aa6.17□□□□□ -1.42
FNDC3A-202ENST00000398316 ABCC1P33527 1531 aa6.17□□□□□ -1.42
FNDC3A-202ENST00000398316 LRRC9Q6ZRR7 1453 aa6.17□□□□□ -1.42
FNDC3A-202ENST00000398316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.17□□□□□ -1.42
FNDC3A-202ENST00000398316 PLB1Q6P1J6 1458 aa6.17□□□□□ -1.42
FNDC3A-202ENST00000398316 TRIM41Q8WV44 630 aa6.17□□□□□ -1.42
FNDC3A-202ENST00000398316 TTC37Q6PGP7 1564 aa6.16□□□□□ -1.42
FNDC3A-202ENST00000398316 ATP10BO94823 1461 aa6.16□□□□□ -1.42
FNDC3A-202ENST00000398316 NEO1Q92859 1461 aa6.16□□□□□ -1.42
FNDC3A-202ENST00000398316 PRG4Q92954 1404 aaPredicted RBP6.16□□□□□ -1.42
FNDC3A-202ENST00000398316 PTPN23Q9H3S7 1636 aa6.15□□□□□ -1.42
FNDC3A-202ENST00000398316 KIAA1107Q9UPP5 1409 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms