RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ANP32CO43423 234 aa21.44■■□□□ 1.02
LSS-202ENST00000397728 KDM2AQ9Y2K7 1162 aa21.44■■□□□ 1.02
LSS-202ENST00000397728 SLC24A1O60721 1099 aa21.43■■□□□ 1.02
LSS-202ENST00000397728 ERICH6Q7L0X2 663 aa21.42■■□□□ 1.02
LSS-202ENST00000397728 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
LSS-202ENST00000397728 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
LSS-202ENST00000397728 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
LSS-202ENST00000397728 NEFMP07197 916 aa21.34■■□□□ 1.01
LSS-202ENST00000397728 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
LSS-202ENST00000397728 ZNF316A6NFI3 1004 aaPredicted RBP21.32■■□□□ 1
LSS-202ENST00000397728 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
LSS-202ENST00000397728 RGL3Q3MIN7 710 aa21.29■■□□□ 1
LSS-202ENST00000397728 NCAPD3P42695 1498 aa21.28■■□□□ 1
LSS-202ENST00000397728 MLECQ14165 292 aa21.28■■□□□ 1
LSS-202ENST00000397728 JPH4Q96JJ6 628 aa21.27■■□□□ 1
LSS-202ENST00000397728 C14orf37Q86TY3 774 aa21.23■□□□□ 0.99
LSS-202ENST00000397728 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
LSS-202ENST00000397728 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
LSS-202ENST00000397728 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
LSS-202ENST00000397728 PLEKHG5O94827 1062 aa21.16■□□□□ 0.98
LSS-202ENST00000397728 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.97
LSS-202ENST00000397728 CLSPNQ9HAW4 1339 aa21.12■□□□□ 0.97
LSS-202ENST00000397728 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
LSS-202ENST00000397728 GGT6Q6P531 493 aa21.11■□□□□ 0.97
LSS-202ENST00000397728 EFCAB2Q5VUJ9 269 aa21.1■□□□□ 0.97
LSS-202ENST00000397728 CC2D2AQ9P2K1 1620 aa21.09■□□□□ 0.97
LSS-202ENST00000397728 DDX10Q13206 875 aaKnown RBP21.09■□□□□ 0.97
LSS-202ENST00000397728 FMN1Q68DA7 1419 aa21.08■□□□□ 0.97
LSS-202ENST00000397728 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
LSS-202ENST00000397728 HIRIP3Q9BW71 556 aaPredicted RBP21.06■□□□□ 0.96
LSS-202ENST00000397728 FGD5Q6ZNL6 1462 aa21.06■□□□□ 0.96
LSS-202ENST00000397728 ACIN1Q9UKV3 1341 aaKnown RBP21.06■□□□□ 0.96
LSS-202ENST00000397728 DAXXQ9UER7 740 aaPredicted RBP21.06■□□□□ 0.96
LSS-202ENST00000397728 FHOD3Q2V2M9 1422 aa21.04■□□□□ 0.96
LSS-202ENST00000397728 NESP48681 1621 aa21.04■□□□□ 0.96
LSS-202ENST00000397728 CANXP27824 592 aaKnown RBP21.04■□□□□ 0.96
LSS-202ENST00000397728 KANK4Q5T7N3 995 aaPredicted RBP21.04■□□□□ 0.96
LSS-202ENST00000397728 BCL11AQ9H165 835 aa21.03■□□□□ 0.96
LSS-202ENST00000397728 VPS8Q8N3P4 1428 aa21.02■□□□□ 0.96
LSS-202ENST00000397728 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
LSS-202ENST00000397728 TMC1Q8TDI8 760 aa21■□□□□ 0.95
LSS-202ENST00000397728 AQRO60306 1485 aaKnown RBP eCLIP21■□□□□ 0.957e-7■■■■■ 40
LSS-202ENST00000397728 ZBTB7CA1YPR0 619 aa20.99■□□□□ 0.95
LSS-202ENST00000397728 PTPRGP23470 1445 aa20.99■□□□□ 0.95
LSS-202ENST00000397728 KANK1Q14678 1352 aa20.98■□□□□ 0.95
LSS-202ENST00000397728 EIF4G2P78344 907 aaKnown RBP eCLIP20.98■□□□□ 0.95
LSS-202ENST00000397728 ZBTB47Q9UFB7 747 aaPredicted RBP20.97■□□□□ 0.95
LSS-202ENST00000397728 RUSC2Q8N2Y8 1516 aa20.96■□□□□ 0.95
LSS-202ENST00000397728 ARHGAP35Q9NRY4 1499 aa20.93■□□□□ 0.94
LSS-202ENST00000397728 A0A0G2JS52 829 aa20.93■□□□□ 0.94
LSS-202ENST00000397728 HAP1P54257 671 aaPredicted RBP20.91■□□□□ 0.94
LSS-202ENST00000397728 SALL2Q9Y467 1007 aaPredicted RBP20.91■□□□□ 0.94
LSS-202ENST00000397728 HNRNPMP52272 730 aaKnown RBP eCLIP20.91■□□□□ 0.943e-7■■■■□ 23.6
LSS-202ENST00000397728 IGF1RP08069 1367 aa20.91■□□□□ 0.94
LSS-202ENST00000397728 FAM9BQ8IZU0 186 aa20.9■□□□□ 0.94
LSS-202ENST00000397728 POGKQ9P215 609 aa20.9■□□□□ 0.94
LSS-202ENST00000397728 SIN3AQ96ST3 1273 aa20.89■□□□□ 0.94
LSS-202ENST00000397728 CARD11Q9BXL7 1154 aa20.89■□□□□ 0.93
LSS-202ENST00000397728 CFTRP13569 1480 aa20.88■□□□□ 0.93
LSS-202ENST00000397728 KIF3BO15066 747 aa20.87■□□□□ 0.93
LSS-202ENST00000397728 LMOD2Q6P5Q4 547 aa20.86■□□□□ 0.93
LSS-202ENST00000397728 HDGFP51858 240 aaKnown RBP20.84■□□□□ 0.93
LSS-202ENST00000397728 SPAG9O60271 1321 aaKnown RBP20.84■□□□□ 0.93
LSS-202ENST00000397728 BICRAQ9NZM4 1560 aa20.83■□□□□ 0.92
LSS-202ENST00000397728 DCAF11Q8TEB1 546 aa20.82■□□□□ 0.92
LSS-202ENST00000397728 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
LSS-202ENST00000397728 WDR43Q15061 677 aaKnown RBP eCLIP20.82■□□□□ 0.925e-11■□□□□ 10.1
LSS-202ENST00000397728 PKD2Q13563 968 aa20.81■□□□□ 0.92
LSS-202ENST00000397728 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
LSS-202ENST00000397728 HNRNPUQ00839 825 aaKnown RBP eCLIP20.79■□□□□ 0.92
LSS-202ENST00000397728 CCDC18Q5T9S5 1454 aa20.78■□□□□ 0.92
LSS-202ENST00000397728 FAM69CQ0P6D2 419 aa20.78■□□□□ 0.92
LSS-202ENST00000397728 CDCA8Q53HL2 280 aa20.78■□□□□ 0.92
LSS-202ENST00000397728 FOXD1Q16676 465 aa20.77■□□□□ 0.92
LSS-202ENST00000397728 ANKRD30AQ9BXX3 1397 aa20.77■□□□□ 0.92
LSS-202ENST00000397728 MRS2Q9HD23 443 aa20.77■□□□□ 0.91
LSS-202ENST00000397728 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
LSS-202ENST00000397728 NUP155O75694 1391 aa20.75■□□□□ 0.91
LSS-202ENST00000397728 PPM1GO15355 546 aaPredicted RBP20.75■□□□□ 0.91
LSS-202ENST00000397728 RSPH4AQ5TD94 716 aa20.74■□□□□ 0.91
LSS-202ENST00000397728 SAFB2Q14151 953 aaKnown RBP eCLIP20.73■□□□□ 0.91
LSS-202ENST00000397728 WASHC2CQ9Y4E1 1318 aa20.73■□□□□ 0.91
LSS-202ENST00000397728 KNSTRNQ9Y448 316 aa20.7■□□□□ 0.9
LSS-202ENST00000397728 STK26Q9P289 416 aa20.69■□□□□ 0.9
LSS-202ENST00000397728 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
LSS-202ENST00000397728 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
LSS-202ENST00000397728 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
LSS-202ENST00000397728 NPM2Q86SE8 214 aaKnown RBP20.65■□□□□ 0.9
LSS-202ENST00000397728 MPHOSPH9Q99550 1183 aa20.64■□□□□ 0.89
LSS-202ENST00000397728 SRPK2P78362 688 aaKnown RBP20.63■□□□□ 0.89
LSS-202ENST00000397728 POLA1P09884 1462 aaPredicted RBP20.61■□□□□ 0.89
LSS-202ENST00000397728 CFAP53Q96M91 514 aa20.6■□□□□ 0.89
LSS-202ENST00000397728 TNNT2P45379 298 aaPredicted RBP20.6■□□□□ 0.89
LSS-202ENST00000397728 PRG4Q92954 1404 aaPredicted RBP20.59■□□□□ 0.89
LSS-202ENST00000397728 NUTM2DQ5VT03 806 aaPredicted RBP20.58■□□□□ 0.89
LSS-202ENST00000397728 SOX12O15370 315 aa20.57■□□□□ 0.88
LSS-202ENST00000397728 EID1Q9Y6B2 187 aa20.57■□□□□ 0.88
LSS-202ENST00000397728 RAB3GAP2Q9H2M9 1393 aa20.56■□□□□ 0.88
LSS-202ENST00000397728 GTF3C3Q9Y5Q9 886 aa20.55■□□□□ 0.88
LSS-202ENST00000397728 TMF1P82094 1093 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms