RNA–Protein interactions for RNA: ENST00000397171.6

SCMH1-208, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 5 BASIC

Gene SCMH1, Length 3,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-208ENST00000397171 LAMC3Q9Y6N6 1575 aa13.93□□□□□ -0.18
SCMH1-208ENST00000397171 PDS5BQ9NTI5 1447 aa13.92□□□□□ -0.18
SCMH1-208ENST00000397171 CUX2O14529 1486 aa13.91□□□□□ -0.18
SCMH1-208ENST00000397171 ERICH6Q7L0X2 663 aa13.89□□□□□ -0.19
SCMH1-208ENST00000397171 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
SCMH1-208ENST00000397171 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
SCMH1-208ENST00000397171 FANCD2Q9BXW9 1451 aa13.88□□□□□ -0.19
SCMH1-208ENST00000397171 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
SCMH1-208ENST00000397171 DDX10Q13206 875 aaKnown RBP13.86□□□□□ -0.19
SCMH1-208ENST00000397171 IGF1RP08069 1367 aa13.86□□□□□ -0.19
SCMH1-208ENST00000397171 MYT1LQ9UL68 1186 aa13.85□□□□□ -0.19
SCMH1-208ENST00000397171 TRIM52Q96A61 297 aa13.85□□□□□ -0.19
SCMH1-208ENST00000397171 ATP1B4Q9UN42 357 aaPredicted RBP13.85□□□□□ -0.19
SCMH1-208ENST00000397171 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
SCMH1-208ENST00000397171 DEKP35659 375 aaKnown RBP13.84□□□□□ -0.19
SCMH1-208ENST00000397171 FGD5Q6ZNL6 1462 aa13.84□□□□□ -0.19
SCMH1-208ENST00000397171 RRBP1Q9P2E9 1410 aaKnown RBP13.83□□□□□ -0.2
SCMH1-208ENST00000397171 MAPKBP1O60336 1514 aa13.82□□□□□ -0.2
SCMH1-208ENST00000397171 CARMIL1Q5VZK9 1371 aa13.81□□□□□ -0.2
SCMH1-208ENST00000397171 PPP1R15AO75807 674 aaPredicted RBP13.81□□□□□ -0.2
SCMH1-208ENST00000397171 CDK11AQ9UQ88 783 aaPredicted RBP13.81□□□□□ -0.2
SCMH1-208ENST00000397171 CCER2I3L3R5 266 aa13.8□□□□□ -0.2
SCMH1-208ENST00000397171 ARHGAP35Q9NRY4 1499 aa13.8□□□□□ -0.2
SCMH1-208ENST00000397171 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
SCMH1-208ENST00000397171 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
SCMH1-208ENST00000397171 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
SCMH1-208ENST00000397171 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
SCMH1-208ENST00000397171 ANP32CO43423 234 aa13.73□□□□□ -0.21
SCMH1-208ENST00000397171 CCNB3Q8WWL7 1395 aa13.73□□□□□ -0.21
SCMH1-208ENST00000397171 RAB3GAP2Q9H2M9 1393 aa13.73□□□□□ -0.21
SCMH1-208ENST00000397171 IRX6P78412 446 aaPredicted RBP13.72□□□□□ -0.21
SCMH1-208ENST00000397171 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
SCMH1-208ENST00000397171 URB2Q14146 1524 aaKnown RBP13.72□□□□□ -0.21
SCMH1-208ENST00000397171 PRDM2Q13029 1718 aa13.71□□□□□ -0.21
SCMH1-208ENST00000397171 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
SCMH1-208ENST00000397171 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
SCMH1-208ENST00000397171 FAM50AQ14320 339 aaKnown RBP13.67□□□□□ -0.22
SCMH1-208ENST00000397171 HIRIP3Q9BW71 556 aaPredicted RBP13.67□□□□□ -0.22
SCMH1-208ENST00000397171 TOPBP1Q92547 1522 aa13.67□□□□□ -0.22
SCMH1-208ENST00000397171 SIN3AQ96ST3 1273 aa13.66□□□□□ -0.22
SCMH1-208ENST00000397171 FHOD3Q2V2M9 1422 aa13.65□□□□□ -0.22
SCMH1-208ENST00000397171 WDR62O43379 1518 aa13.63□□□□□ -0.23
SCMH1-208ENST00000397171 NBR1Q14596 966 aa13.63□□□□□ -0.23
SCMH1-208ENST00000397171 NOP58Q9Y2X3 529 aaKnown RBP13.63□□□□□ -0.23
SCMH1-208ENST00000397171 ERICH6BQ5W0A0 696 aa13.63□□□□□ -0.23
SCMH1-208ENST00000397171 PPP4R2Q9NY27 417 aa13.63□□□□□ -0.23
SCMH1-208ENST00000397171 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
SCMH1-208ENST00000397171 HNRNPUQ00839 825 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCMH1-208ENST00000397171 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
SCMH1-208ENST00000397171 SETD5Q9C0A6 1442 aa13.62□□□□□ -0.23
SCMH1-208ENST00000397171 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
SCMH1-208ENST00000397171 PHLDB1Q86UU1 1377 aa13.6□□□□□ -0.23
SCMH1-208ENST00000397171 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
SCMH1-208ENST00000397171 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
SCMH1-208ENST00000397171 TIAM1Q13009 1591 aa13.57□□□□□ -0.24
SCMH1-208ENST00000397171 LRRC9Q6ZRR7 1453 aa13.56□□□□□ -0.24
SCMH1-208ENST00000397171 ARID3CA6NKF2 412 aa13.55□□□□□ -0.24
SCMH1-208ENST00000397171 B4GALNT3Q6L9W6 998 aa13.55□□□□□ -0.24
SCMH1-208ENST00000397171 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
SCMH1-208ENST00000397171 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
SCMH1-208ENST00000397171 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
SCMH1-208ENST00000397171 IL27Q8NEV9 243 aa13.52□□□□□ -0.25
SCMH1-208ENST00000397171 CCDC136Q96JN2 1154 aa13.51□□□□□ -0.25
SCMH1-208ENST00000397171 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.253e-6■■■■□ 21.2
SCMH1-208ENST00000397171 GAPVD1Q14C86 1478 aa13.5□□□□□ -0.25
SCMH1-208ENST00000397171 FBLN2P98095 1184 aa13.5□□□□□ -0.25
SCMH1-208ENST00000397171 RTL5Q5HYW3 569 aaPredicted RBP13.48□□□□□ -0.25
SCMH1-208ENST00000397171 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
SCMH1-208ENST00000397171 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.26
SCMH1-208ENST00000397171 IPO9Q96P70 1041 aaKnown RBP13.46□□□□□ -0.26
SCMH1-208ENST00000397171 MAP3K1Q13233 1512 aa13.46□□□□□ -0.26
SCMH1-208ENST00000397171 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
SCMH1-208ENST00000397171 CASKIN1Q8WXD9 1431 aa13.44□□□□□ -0.26
SCMH1-208ENST00000397171 TONSLQ96HA7 1378 aa13.44□□□□□ -0.26
SCMH1-208ENST00000397171 ANP32AP39687 249 aaKnown RBP13.43□□□□□ -0.26
SCMH1-208ENST00000397171 CUL7Q14999 1698 aa13.43□□□□□ -0.26
SCMH1-208ENST00000397171 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
SCMH1-208ENST00000397171 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.42□□□□□ -0.26
SCMH1-208ENST00000397171 CCDC184Q52MB2 194 aa13.42□□□□□ -0.26
SCMH1-208ENST00000397171 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
SCMH1-208ENST00000397171 FYCO1Q9BQS8 1478 aa13.42□□□□□ -0.26
SCMH1-208ENST00000397171 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
SCMH1-208ENST00000397171 UBE2Q2Q8WVN8 375 aa13.41□□□□□ -0.26
SCMH1-208ENST00000397171 WASHC2AQ641Q2 1341 aa13.4□□□□□ -0.26
SCMH1-208ENST00000397171 CTTNBP2Q8WZ74 1663 aa13.4□□□□□ -0.26
SCMH1-208ENST00000397171 CHIC2Q9UKJ5 165 aa13.4□□□□□ -0.26
SCMH1-208ENST00000397171 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
SCMH1-208ENST00000397171 ABCA5Q8WWZ7 1642 aa13.39□□□□□ -0.27
SCMH1-208ENST00000397171 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
SCMH1-208ENST00000397171 ZBED9Q6R2W3 1325 aa13.39□□□□□ -0.27
SCMH1-208ENST00000397171 CFAP43Q8NDM7 1665 aa13.39□□□□□ -0.27
SCMH1-208ENST00000397171 SNAPC4Q5SXM2 1469 aa13.37□□□□□ -0.27
SCMH1-208ENST00000397171 KDM5BQ9UGL1 1544 aa13.37□□□□□ -0.27
SCMH1-208ENST00000397171 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
SCMH1-208ENST00000397171 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
SCMH1-208ENST00000397171 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
SCMH1-208ENST00000397171 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
SCMH1-208ENST00000397171 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
SCMH1-208ENST00000397171 PTPRKQ15262 1439 aa13.35□□□□□ -0.27
SCMH1-208ENST00000397171 CNTLNQ9NXG0 1405 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms