RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 FHOD3Q2V2M9 1422 aa20.6■□□□□ 0.89
SREBF1-205ENST00000395757 KCNH8Q96L42 1107 aa20.59■□□□□ 0.89
SREBF1-205ENST00000395757 DHX57Q6P158 1386 aaKnown RBP20.59■□□□□ 0.89
SREBF1-205ENST00000395757 NESP48681 1621 aa20.57■□□□□ 0.88
SREBF1-205ENST00000395757 MTUS2Q5JR59 1369 aa20.57■□□□□ 0.88
SREBF1-205ENST00000395757 RAB3GAP2Q9H2M9 1393 aa20.55■□□□□ 0.88
SREBF1-205ENST00000395757 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
SREBF1-205ENST00000395757 ZNF777Q9ULD5 760 aaPredicted RBP20.55■□□□□ 0.88
SREBF1-205ENST00000395757 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
SREBF1-205ENST00000395757 ZNF326Q5BKZ1 582 aaKnown RBP20.55■□□□□ 0.88
SREBF1-205ENST00000395757 PEG3Q9GZU2 1588 aa20.54■□□□□ 0.88
SREBF1-205ENST00000395757 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
SREBF1-205ENST00000395757 CFTRP13569 1480 aa20.51■□□□□ 0.87
SREBF1-205ENST00000395757 ARHGAP35Q9NRY4 1499 aa20.49■□□□□ 0.87
SREBF1-205ENST00000395757 ERICH6Q7L0X2 663 aa20.48■□□□□ 0.87
SREBF1-205ENST00000395757 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
SREBF1-205ENST00000395757 SENP3-EIF4A1A0A087X0R7 540 aa20.46■□□□□ 0.87
SREBF1-205ENST00000395757 FOXD1Q16676 465 aa20.44■□□□□ 0.86
SREBF1-205ENST00000395757 PHLDB1Q86UU1 1377 aa20.43■□□□□ 0.86
SREBF1-205ENST00000395757 TONSLQ96HA7 1378 aa20.42■□□□□ 0.86
SREBF1-205ENST00000395757 ANP32CO43423 234 aa20.39■□□□□ 0.85
SREBF1-205ENST00000395757 NEFLP07196 543 aa20.38■□□□□ 0.85
SREBF1-205ENST00000395757 SETD5Q9C0A6 1442 aa20.35■□□□□ 0.85
SREBF1-205ENST00000395757 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
SREBF1-205ENST00000395757 HMGXB3Q12766 1538 aa20.33■□□□□ 0.85
SREBF1-205ENST00000395757 FKBP8Q14318 412 aa20.32■□□□□ 0.84
SREBF1-205ENST00000395757 FHAD1B1AJZ9 1412 aa20.31■□□□□ 0.84
SREBF1-205ENST00000395757 IRX6P78412 446 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-205ENST00000395757 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
SREBF1-205ENST00000395757 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.84
SREBF1-205ENST00000395757 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
SREBF1-205ENST00000395757 BIVM-ERCC5R4GMW8 1640 aa20.21■□□□□ 0.83
SREBF1-205ENST00000395757 POLA1P09884 1462 aaPredicted RBP20.21■□□□□ 0.83
SREBF1-205ENST00000395757 HNRNPUQ00839 825 aaKnown RBP eCLIP20.21■□□□□ 0.83
SREBF1-205ENST00000395757 LRRC9Q6ZRR7 1453 aa20.2■□□□□ 0.82
SREBF1-205ENST00000395757 RRBP1Q9P2E9 1410 aaKnown RBP20.2■□□□□ 0.82
SREBF1-205ENST00000395757 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
SREBF1-205ENST00000395757 SUPT16HQ9Y5B9 1047 aaKnown RBP20.18■□□□□ 0.82
SREBF1-205ENST00000395757 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.822e-8■■■■■ 31.9
SREBF1-205ENST00000395757 PPP1R15AO75807 674 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-205ENST00000395757 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
SREBF1-205ENST00000395757 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
SREBF1-205ENST00000395757 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
SREBF1-205ENST00000395757 KDM2AQ9Y2K7 1162 aa20.15■□□□□ 0.82
SREBF1-205ENST00000395757 ZNF644Q9H582 1327 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-205ENST00000395757 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
SREBF1-205ENST00000395757 GAPVD1Q14C86 1478 aa20.1■□□□□ 0.81
SREBF1-205ENST00000395757 FMN1Q68DA7 1419 aa20.08■□□□□ 0.81
SREBF1-205ENST00000395757 CDK11AQ9UQ88 783 aaPredicted RBP20.08■□□□□ 0.81
SREBF1-205ENST00000395757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.88e-9■■□□□ 11.8
SREBF1-205ENST00000395757 TIAM1Q13009 1591 aa20.07■□□□□ 0.8
SREBF1-205ENST00000395757 CFDP1Q9UEE9 299 aaPredicted RBP20.06■□□□□ 0.8
SREBF1-205ENST00000395757 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-205ENST00000395757 HSPA5P11021 654 aaKnown RBP20.04■□□□□ 0.8
SREBF1-205ENST00000395757 PCF11O94913 1555 aaKnown RBP20.03■□□□□ 0.8
SREBF1-205ENST00000395757 EIF4G2P78344 907 aaKnown RBP eCLIP20.02■□□□□ 0.86e-6■■■■□ 25.1
SREBF1-205ENST00000395757 FGD6Q6ZV73 1430 aa20.01■□□□□ 0.79
SREBF1-205ENST00000395757 MPHOSPH9Q99550 1183 aa20.01■□□□□ 0.79
SREBF1-205ENST00000395757 L3MBTL2Q969R5 705 aa20.01■□□□□ 0.79
SREBF1-205ENST00000395757 SLC24A1O60721 1099 aa20■□□□□ 0.79
SREBF1-205ENST00000395757 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
SREBF1-205ENST00000395757 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
SREBF1-205ENST00000395757 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
SREBF1-205ENST00000395757 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
SREBF1-205ENST00000395757 MRS2Q9HD23 443 aa19.98■□□□□ 0.79
SREBF1-205ENST00000395757 CCDC18Q5T9S5 1454 aa19.97■□□□□ 0.79
SREBF1-205ENST00000395757 CASKIN1Q8WXD9 1431 aa19.95■□□□□ 0.78
SREBF1-205ENST00000395757 DNMBPQ6XZF7 1577 aa19.93■□□□□ 0.78
SREBF1-205ENST00000395757 NCOA2Q15596 1464 aa19.93■□□□□ 0.78
SREBF1-205ENST00000395757 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
SREBF1-205ENST00000395757 PLEKHD1A6NEE1 506 aa19.91■□□□□ 0.78
SREBF1-205ENST00000395757 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-205ENST00000395757 PTPRKQ15262 1439 aa19.9■□□□□ 0.78
SREBF1-205ENST00000395757 TSPY4P0CV99 314 aa19.88■□□□□ 0.77
SREBF1-205ENST00000395757 TSPY10P0CW01 314 aa19.88■□□□□ 0.77
SREBF1-205ENST00000395757 MAPKBP1O60336 1514 aa19.87■□□□□ 0.77
SREBF1-205ENST00000395757 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
SREBF1-205ENST00000395757 PKD2Q13563 968 aa19.86■□□□□ 0.77
SREBF1-205ENST00000395757 FYCO1Q9BQS8 1478 aa19.85■□□□□ 0.77
SREBF1-205ENST00000395757 CDK13Q14004 1512 aaKnown RBP19.85■□□□□ 0.77
SREBF1-205ENST00000395757 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
SREBF1-205ENST00000395757 HNRNPMP52272 730 aaKnown RBP eCLIP19.83■□□□□ 0.778e-8■■□□□ 12.4
SREBF1-205ENST00000395757 CCDC184Q52MB2 194 aa19.81■□□□□ 0.76
SREBF1-205ENST00000395757 TIMELESSQ9UNS1 1208 aa19.81■□□□□ 0.76
SREBF1-205ENST00000395757 ZNF608Q9ULD9 1512 aaPredicted RBP19.8■□□□□ 0.76
SREBF1-205ENST00000395757 TSHZ2Q9NRE2 1034 aa19.77■□□□□ 0.76
SREBF1-205ENST00000395757 DCAF11Q8TEB1 546 aa19.77■□□□□ 0.75
SREBF1-205ENST00000395757 NAIPQ13075 1403 aa19.76■□□□□ 0.75
SREBF1-205ENST00000395757 WASHC2AQ641Q2 1341 aa19.76■□□□□ 0.75
SREBF1-205ENST00000395757 NBPF8Q3BBV2 869 aa19.76■□□□□ 0.75
SREBF1-205ENST00000395757 UACAQ9BZF9 1416 aa19.76■□□□□ 0.75
SREBF1-205ENST00000395757 CARD11Q9BXL7 1154 aa19.74■□□□□ 0.75
SREBF1-205ENST00000395757 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
SREBF1-205ENST00000395757 C11orf95C9JLR9 678 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-205ENST00000395757 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
SREBF1-205ENST00000395757 PRG4Q92954 1404 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-205ENST00000395757 CCER2I3L3R5 266 aa19.7■□□□□ 0.74
SREBF1-205ENST00000395757 EFCAB5A4FU69 1503 aa19.7■□□□□ 0.74
SREBF1-205ENST00000395757 B4GALNT3Q6L9W6 998 aa19.7■□□□□ 0.74
SREBF1-205ENST00000395757 HFM1A2PYH4 1435 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms