RNA–Protein interactions for RNA: ENST00000394805.7

MATR3-201, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-201ENST00000394805 CUX1P39880 1505 aa12.34□□□□□ -0.43
MATR3-201ENST00000394805 SETD5Q9C0A6 1442 aa12.34□□□□□ -0.43
MATR3-201ENST00000394805 ANP32EQ9BTT0 268 aa12.33□□□□□ -0.44
MATR3-201ENST00000394805 PHLDB1Q86UU1 1377 aa12.32□□□□□ -0.44
MATR3-201ENST00000394805 ARID3CA6NKF2 412 aa12.31□□□□□ -0.44
MATR3-201ENST00000394805 ERICH3Q5RHP9 1530 aa12.31□□□□□ -0.44
MATR3-201ENST00000394805 CARMIL1Q5VZK9 1371 aa12.31□□□□□ -0.44
MATR3-201ENST00000394805 IGF1RP08069 1367 aa12.29□□□□□ -0.44
MATR3-201ENST00000394805 HNRNPUQ00839 825 aaKnown RBP eCLIP12.29□□□□□ -0.44
MATR3-201ENST00000394805 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
MATR3-201ENST00000394805 TONSLQ96HA7 1378 aa12.29□□□□□ -0.44
MATR3-201ENST00000394805 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
MATR3-201ENST00000394805 PPP1R15AO75807 674 aaPredicted RBP12.27□□□□□ -0.44
MATR3-201ENST00000394805 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.45
MATR3-201ENST00000394805 MAPKBP1O60336 1514 aa12.25□□□□□ -0.45
MATR3-201ENST00000394805 FHOD3Q2V2M9 1422 aa12.25□□□□□ -0.45
MATR3-201ENST00000394805 BIVM-ERCC5R4GMW8 1640 aa12.24□□□□□ -0.45
MATR3-201ENST00000394805 RRP7BPQ9NSQ0 103 aa12.24□□□□□ -0.45
MATR3-201ENST00000394805 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
MATR3-201ENST00000394805 LRRC9Q6ZRR7 1453 aa12.22□□□□□ -0.45
MATR3-201ENST00000394805 POLR3GLQ9BT43 218 aa12.22□□□□□ -0.45
MATR3-201ENST00000394805 ERICH6Q7L0X2 663 aa12.21□□□□□ -0.45
MATR3-201ENST00000394805 FAM9BQ8IZU0 186 aa12.2□□□□□ -0.46
MATR3-201ENST00000394805 MTUS2Q5JR59 1369 aa12.2□□□□□ -0.46
MATR3-201ENST00000394805 TIAM1Q13009 1591 aa12.19□□□□□ -0.46
MATR3-201ENST00000394805 CFTRP13569 1480 aa12.18□□□□□ -0.46
MATR3-201ENST00000394805 FOXD1Q16676 465 aa12.18□□□□□ -0.46
MATR3-201ENST00000394805 NCAPD3P42695 1498 aa12.17□□□□□ -0.46
MATR3-201ENST00000394805 FGD5Q6ZNL6 1462 aa12.17□□□□□ -0.46
MATR3-201ENST00000394805 CCER2I3L3R5 266 aa12.17□□□□□ -0.46
MATR3-201ENST00000394805 FHAD1B1AJZ9 1412 aa12.16□□□□□ -0.46
MATR3-201ENST00000394805 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
MATR3-201ENST00000394805 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
MATR3-201ENST00000394805 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
MATR3-201ENST00000394805 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
MATR3-201ENST00000394805 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
MATR3-201ENST00000394805 ZNF326Q5BKZ1 582 aaKnown RBP12.12□□□□□ -0.47
MATR3-201ENST00000394805 BCL11AQ9H165 835 aa12.12□□□□□ -0.47
MATR3-201ENST00000394805 CCDC184Q52MB2 194 aa12.11□□□□□ -0.47
MATR3-201ENST00000394805 PCF11O94913 1555 aaKnown RBP12.1□□□□□ -0.47
MATR3-201ENST00000394805 B4GALNT3Q6L9W6 998 aa12.09□□□□□ -0.47
MATR3-201ENST00000394805 MRS2Q9HD23 443 aa12.09□□□□□ -0.47
MATR3-201ENST00000394805 CCDC18Q5T9S5 1454 aa12.09□□□□□ -0.47
MATR3-201ENST00000394805 TDRD9Q8NDG6 1382 aaKnown RBP12.08□□□□□ -0.48
MATR3-201ENST00000394805 MSH5O43196 834 aa12.08□□□□□ -0.48
MATR3-201ENST00000394805 EIF4G2P78344 907 aaKnown RBP eCLIP12.08□□□□□ -0.48
MATR3-201ENST00000394805 HMGXB3Q12766 1538 aa12.07□□□□□ -0.48
MATR3-201ENST00000394805 WASHC2AQ641Q2 1341 aa12.06□□□□□ -0.48
MATR3-201ENST00000394805 FGD6Q6ZV73 1430 aa12.06□□□□□ -0.48
MATR3-201ENST00000394805 PTPRKQ15262 1439 aa12.06□□□□□ -0.48
MATR3-201ENST00000394805 L3MBTL2Q969R5 705 aa12.04□□□□□ -0.48
MATR3-201ENST00000394805 FANCD2Q9BXW9 1451 aa12.03□□□□□ -0.48
MATR3-201ENST00000394805 C11orf95C9JLR9 678 aaPredicted RBP12.02□□□□□ -0.49
MATR3-201ENST00000394805 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.494e-7■■■■□ 22.7
MATR3-201ENST00000394805 CASKIN1Q8WXD9 1431 aa12.01□□□□□ -0.49
MATR3-201ENST00000394805 MPHOSPH9Q99550 1183 aa12□□□□□ -0.49
MATR3-201ENST00000394805 MAP3K1Q13233 1512 aa12□□□□□ -0.49
MATR3-201ENST00000394805 UACAQ9BZF9 1416 aa12□□□□□ -0.49
MATR3-201ENST00000394805 NESP48681 1621 aa12□□□□□ -0.49
MATR3-201ENST00000394805 NBR1Q14596 966 aa11.99□□□□□ -0.49
MATR3-201ENST00000394805 FMN1Q68DA7 1419 aa11.99□□□□□ -0.49
MATR3-201ENST00000394805 ZNF777Q9ULD5 760 aaPredicted RBP11.99□□□□□ -0.49
MATR3-201ENST00000394805 SALL2Q9Y467 1007 aaPredicted RBP11.98□□□□□ -0.49
MATR3-201ENST00000394805 FYCO1Q9BQS8 1478 aa11.98□□□□□ -0.49
MATR3-201ENST00000394805 SLC4A1APQ9BWU0 796 aaKnown RBP11.98□□□□□ -0.49
MATR3-201ENST00000394805 PPP4R2Q9NY27 417 aa11.98□□□□□ -0.49
MATR3-201ENST00000394805 NAIPQ13075 1403 aa11.98□□□□□ -0.49
MATR3-201ENST00000394805 NCOA2Q15596 1464 aa11.97□□□□□ -0.49
MATR3-201ENST00000394805 PRKRIP1Q9H875 184 aaPredicted RBP11.97□□□□□ -0.49
MATR3-201ENST00000394805 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
MATR3-201ENST00000394805 POLA1P09884 1462 aaPredicted RBP11.96□□□□□ -0.5
MATR3-201ENST00000394805 MYOM3Q5VTT5 1437 aa11.94□□□□□ -0.5
MATR3-201ENST00000394805 NBPF8Q3BBV2 869 aa11.94□□□□□ -0.5
MATR3-201ENST00000394805 ZNF644Q9H582 1327 aaPredicted RBP11.94□□□□□ -0.5
MATR3-201ENST00000394805 CFAP43Q8NDM7 1665 aa11.92□□□□□ -0.5
MATR3-201ENST00000394805 DNAJC5BQ9UF47 199 aa11.92□□□□□ -0.5
MATR3-201ENST00000394805 PTPN23Q9H3S7 1636 aa11.91□□□□□ -0.5
MATR3-201ENST00000394805 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
MATR3-201ENST00000394805 CCDC136Q96JN2 1154 aa11.91□□□□□ -0.5
MATR3-201ENST00000394805 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
MATR3-201ENST00000394805 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
MATR3-201ENST00000394805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.9□□□□□ -0.515e-19■■□□□ 13.5
MATR3-201ENST00000394805 CCDC7Q96M83 1385 aa11.89□□□□□ -0.51
MATR3-201ENST00000394805 KIF7Q2M1P5 1343 aa11.88□□□□□ -0.51
MATR3-201ENST00000394805 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
MATR3-201ENST00000394805 CNTLNQ9NXG0 1405 aa11.87□□□□□ -0.51
MATR3-201ENST00000394805 EFCAB5A4FU69 1503 aa11.87□□□□□ -0.51
MATR3-201ENST00000394805 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
MATR3-201ENST00000394805 FBLN2P98095 1184 aa11.87□□□□□ -0.51
MATR3-201ENST00000394805 TMC1Q8TDI8 760 aa11.87□□□□□ -0.51
MATR3-201ENST00000394805 SNAPC4Q5SXM2 1469 aa11.86□□□□□ -0.51
MATR3-201ENST00000394805 CC2D2AQ9P2K1 1620 aa11.85□□□□□ -0.51
MATR3-201ENST00000394805 AKNAQ7Z591 1439 aa11.85□□□□□ -0.51
MATR3-201ENST00000394805 GAPVD1Q14C86 1478 aa11.85□□□□□ -0.51
MATR3-201ENST00000394805 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
MATR3-201ENST00000394805 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
MATR3-201ENST00000394805 DEKP35659 375 aaKnown RBP11.84□□□□□ -0.51
MATR3-201ENST00000394805 DNMBPQ6XZF7 1577 aa11.83□□□□□ -0.52
MATR3-201ENST00000394805 NOP58Q9Y2X3 529 aaKnown RBP11.83□□□□□ -0.52
MATR3-201ENST00000394805 CDK13Q14004 1512 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms