RNA–Protein interactions for RNA: ENST00000394593.7

LRRC8D-202, Transcript of leucine rich repeat containing 8 VRAC subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC8D, Length 3,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8D-202ENST00000394593 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
LRRC8D-202ENST00000394593 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
LRRC8D-202ENST00000394593 P3H3Q8IVL6 736 aa13.85□□□□□ -0.19
LRRC8D-202ENST00000394593 MAPKBP1O60336 1514 aa13.84□□□□□ -0.19
LRRC8D-202ENST00000394593 URB2Q14146 1524 aaKnown RBP13.84□□□□□ -0.19
LRRC8D-202ENST00000394593 WDR62O43379 1518 aa13.83□□□□□ -0.19
LRRC8D-202ENST00000394593 ABCA10Q8WWZ4 1543 aa13.83□□□□□ -0.2
LRRC8D-202ENST00000394593 CARMIL1Q5VZK9 1371 aa13.82□□□□□ -0.2
LRRC8D-202ENST00000394593 SUPT16HQ9Y5B9 1047 aaKnown RBP13.82□□□□□ -0.2
LRRC8D-202ENST00000394593 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
LRRC8D-202ENST00000394593 TIAM1Q13009 1591 aa13.82□□□□□ -0.2
LRRC8D-202ENST00000394593 TARBP1Q13395 1621 aaKnown RBP13.81□□□□□ -0.2
LRRC8D-202ENST00000394593 SIN3AQ96ST3 1273 aa13.81□□□□□ -0.2
LRRC8D-202ENST00000394593 ABCA5Q8WWZ7 1642 aa13.81□□□□□ -0.2
LRRC8D-202ENST00000394593 FGD5Q6ZNL6 1462 aa13.81□□□□□ -0.2
LRRC8D-202ENST00000394593 THOC2Q8NI27 1593 aaKnown RBP13.81□□□□□ -0.2
LRRC8D-202ENST00000394593 FAM50AQ14320 339 aaKnown RBP13.8□□□□□ -0.2
LRRC8D-202ENST00000394593 ATP1B4Q9UN42 357 aaPredicted RBP13.8□□□□□ -0.2
LRRC8D-202ENST00000394593 LRRC9Q6ZRR7 1453 aa13.78□□□□□ -0.2
LRRC8D-202ENST00000394593 POLA1P09884 1462 aaPredicted RBP13.78□□□□□ -0.2
LRRC8D-202ENST00000394593 DNAJC5BQ9UF47 199 aa13.77□□□□□ -0.21
LRRC8D-202ENST00000394593 MRC2Q9UBG0 1479 aa13.77□□□□□ -0.21
LRRC8D-202ENST00000394593 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
LRRC8D-202ENST00000394593 CUL7Q14999 1698 aa13.76□□□□□ -0.21
LRRC8D-202ENST00000394593 HIRIP3Q9BW71 556 aaPredicted RBP13.75□□□□□ -0.21
LRRC8D-202ENST00000394593 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
LRRC8D-202ENST00000394593 PCF11O94913 1555 aaKnown RBP13.73□□□□□ -0.21
LRRC8D-202ENST00000394593 FHOD3Q2V2M9 1422 aa13.72□□□□□ -0.21
LRRC8D-202ENST00000394593 MAP3K1Q13233 1512 aa13.72□□□□□ -0.21
LRRC8D-202ENST00000394593 RAD54L2Q9Y4B4 1467 aa13.71□□□□□ -0.21
LRRC8D-202ENST00000394593 PBRM1Q86U86 1689 aa13.68□□□□□ -0.22
LRRC8D-202ENST00000394593 FHAD1B1AJZ9 1412 aa13.67□□□□□ -0.22
LRRC8D-202ENST00000394593 CFAP43Q8NDM7 1665 aa13.67□□□□□ -0.22
LRRC8D-202ENST00000394593 BCANQ96GW7 911 aa13.65□□□□□ -0.22
LRRC8D-202ENST00000394593 PPP1R15AO75807 674 aaPredicted RBP13.64□□□□□ -0.23
LRRC8D-202ENST00000394593 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
LRRC8D-202ENST00000394593 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
LRRC8D-202ENST00000394593 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
LRRC8D-202ENST00000394593 MYT1Q01538 1121 aa13.59□□□□□ -0.23
LRRC8D-202ENST00000394593 FYCO1Q9BQS8 1478 aa13.59□□□□□ -0.23
LRRC8D-202ENST00000394593 PTPRKQ15262 1439 aa13.59□□□□□ -0.23
LRRC8D-202ENST00000394593 CASKIN1Q8WXD9 1431 aa13.59□□□□□ -0.23
LRRC8D-202ENST00000394593 TRIM52Q96A61 297 aa13.57□□□□□ -0.24
LRRC8D-202ENST00000394593 FKBP8Q14318 412 aa13.57□□□□□ -0.24
LRRC8D-202ENST00000394593 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
LRRC8D-202ENST00000394593 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
LRRC8D-202ENST00000394593 SNAPC4Q5SXM2 1469 aa13.54□□□□□ -0.24
LRRC8D-202ENST00000394593 EFCAB5A4FU69 1503 aa13.53□□□□□ -0.24
LRRC8D-202ENST00000394593 GAPVD1Q14C86 1478 aa13.53□□□□□ -0.24
LRRC8D-202ENST00000394593 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
LRRC8D-202ENST00000394593 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
LRRC8D-202ENST00000394593 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
LRRC8D-202ENST00000394593 CCDC18Q5T9S5 1454 aa13.52□□□□□ -0.24
LRRC8D-202ENST00000394593 MTUS2Q5JR59 1369 aa13.52□□□□□ -0.24
LRRC8D-202ENST00000394593 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.24
LRRC8D-202ENST00000394593 AQRO60306 1485 aaKnown RBP eCLIP13.52□□□□□ -0.256e-6■■■■□ 23.2
LRRC8D-202ENST00000394593 TONSLQ96HA7 1378 aa13.51□□□□□ -0.25
LRRC8D-202ENST00000394593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
LRRC8D-202ENST00000394593 ANP32CO43423 234 aa13.49□□□□□ -0.25
LRRC8D-202ENST00000394593 FMN1Q68DA7 1419 aa13.49□□□□□ -0.25
LRRC8D-202ENST00000394593 SAMD9Q5K651 1589 aa13.48□□□□□ -0.25
LRRC8D-202ENST00000394593 HFM1A2PYH4 1435 aa13.48□□□□□ -0.25
LRRC8D-202ENST00000394593 PTPN23Q9H3S7 1636 aa13.48□□□□□ -0.25
LRRC8D-202ENST00000394593 NAIPQ13075 1403 aa13.47□□□□□ -0.25
LRRC8D-202ENST00000394593 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
LRRC8D-202ENST00000394593 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
LRRC8D-202ENST00000394593 CHIC2Q9UKJ5 165 aa13.47□□□□□ -0.25
LRRC8D-202ENST00000394593 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
LRRC8D-202ENST00000394593 CCER2I3L3R5 266 aa13.46□□□□□ -0.25
LRRC8D-202ENST00000394593 RRP7BPQ9NSQ0 103 aa13.46□□□□□ -0.25
LRRC8D-202ENST00000394593 ERCC6Q03468 1493 aa13.45□□□□□ -0.26
LRRC8D-202ENST00000394593 KDM5BQ9UGL1 1544 aa13.44□□□□□ -0.26
LRRC8D-202ENST00000394593 MYOM3Q5VTT5 1437 aa13.44□□□□□ -0.26
LRRC8D-202ENST00000394593 MAGI1Q96QZ7 1491 aaPredicted RBP13.44□□□□□ -0.26
LRRC8D-202ENST00000394593 MAGI3Q5TCQ9 1506 aa13.43□□□□□ -0.26
LRRC8D-202ENST00000394593 ARID3CA6NKF2 412 aa13.43□□□□□ -0.26
LRRC8D-202ENST00000394593 DENND4BO75064 1496 aaPredicted RBP13.4□□□□□ -0.26
LRRC8D-202ENST00000394593 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
LRRC8D-202ENST00000394593 FOXD1Q16676 465 aa13.39□□□□□ -0.27
LRRC8D-202ENST00000394593 NEFLP07196 543 aa13.39□□□□□ -0.27
LRRC8D-202ENST00000394593 KDM6BO15054 1643 aa13.39□□□□□ -0.27
LRRC8D-202ENST00000394593 SUPT6HQ7KZ85 1726 aaKnown RBP13.38□□□□□ -0.27
LRRC8D-202ENST00000394593 WASHC2AQ641Q2 1341 aa13.38□□□□□ -0.27
LRRC8D-202ENST00000394593 HSPA5P11021 654 aaKnown RBP13.38□□□□□ -0.27
LRRC8D-202ENST00000394593 IRX6P78412 446 aaPredicted RBP13.37□□□□□ -0.27
LRRC8D-202ENST00000394593 UGGT2Q9NYU1 1516 aa13.37□□□□□ -0.27
LRRC8D-202ENST00000394593 HNRNPUQ00839 825 aaKnown RBP eCLIP13.36□□□□□ -0.27
LRRC8D-202ENST00000394593 ANP32EQ9BTT0 268 aa13.36□□□□□ -0.27
LRRC8D-202ENST00000394593 EHBP1L1Q8N3D4 1523 aa13.35□□□□□ -0.27
LRRC8D-202ENST00000394593 CCDC184Q52MB2 194 aa13.35□□□□□ -0.27
LRRC8D-202ENST00000394593 RBM19Q9Y4C8 960 aaKnown RBP13.35□□□□□ -0.27
LRRC8D-202ENST00000394593 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
LRRC8D-202ENST00000394593 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.28
LRRC8D-202ENST00000394593 IQGAP2Q13576 1575 aa13.33□□□□□ -0.28
LRRC8D-202ENST00000394593 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
LRRC8D-202ENST00000394593 CDK13Q14004 1512 aaKnown RBP13.32□□□□□ -0.28
LRRC8D-202ENST00000394593 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
LRRC8D-202ENST00000394593 L3MBTL2Q969R5 705 aa13.31□□□□□ -0.28
LRRC8D-202ENST00000394593 MPHOSPH9Q99550 1183 aa13.31□□□□□ -0.28
LRRC8D-202ENST00000394593 NUP160Q12769 1436 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms