RNA–Protein interactions for RNA: ENST00000393955.6

PC-201, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-201ENST00000393955 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
PC-201ENST00000393955 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
PC-201ENST00000393955 CARMIL1Q5VZK9 1371 aa14.13□□□□□ -0.15
PC-201ENST00000393955 RRBP1Q9P2E9 1410 aaKnown RBP14.12□□□□□ -0.15
PC-201ENST00000393955 ZNF777Q9ULD5 760 aaPredicted RBP14.11□□□□□ -0.15
PC-201ENST00000393955 FANCD2Q9BXW9 1451 aa14.11□□□□□ -0.15
PC-201ENST00000393955 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
PC-201ENST00000393955 PHLDB1Q86UU1 1377 aa14.06□□□□□ -0.16
PC-201ENST00000393955 CHIC2Q9UKJ5 165 aa14.05□□□□□ -0.16
PC-201ENST00000393955 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
PC-201ENST00000393955 TIAM1Q13009 1591 aa14.04□□□□□ -0.16
PC-201ENST00000393955 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
PC-201ENST00000393955 FHOD3Q2V2M9 1422 aa14.03□□□□□ -0.16
PC-201ENST00000393955 ZNF326Q5BKZ1 582 aaKnown RBP14.03□□□□□ -0.16
PC-201ENST00000393955 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
PC-201ENST00000393955 PCF11O94913 1555 aaKnown RBP14.02□□□□□ -0.16
PC-201ENST00000393955 RAB3GAP2Q9H2M9 1393 aa14□□□□□ -0.17
PC-201ENST00000393955 LRRC9Q6ZRR7 1453 aa14□□□□□ -0.17
PC-201ENST00000393955 MAPKBP1O60336 1514 aa14□□□□□ -0.17
PC-201ENST00000393955 URB2Q14146 1524 aaKnown RBP13.99□□□□□ -0.17
PC-201ENST00000393955 DNMBPQ6XZF7 1577 aa13.99□□□□□ -0.17
PC-201ENST00000393955 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
PC-201ENST00000393955 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
PC-201ENST00000393955 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.17
PC-201ENST00000393955 SIN3AQ96ST3 1273 aa13.95□□□□□ -0.18
PC-201ENST00000393955 KCNH8Q96L42 1107 aa13.93□□□□□ -0.18
PC-201ENST00000393955 LRRIQ1Q96JM4 1722 aa13.93□□□□□ -0.18
PC-201ENST00000393955 HIRIP3Q9BW71 556 aaPredicted RBP13.93□□□□□ -0.18
PC-201ENST00000393955 CFAP43Q8NDM7 1665 aa13.92□□□□□ -0.18
PC-201ENST00000393955 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
PC-201ENST00000393955 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
PC-201ENST00000393955 MAP3K1Q13233 1512 aa13.89□□□□□ -0.19
PC-201ENST00000393955 CTTNBP2Q8WZ74 1663 aa13.87□□□□□ -0.19
PC-201ENST00000393955 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
PC-201ENST00000393955 PTPRKQ15262 1439 aa13.87□□□□□ -0.19
PC-201ENST00000393955 SETD5Q9C0A6 1442 aa13.87□□□□□ -0.19
PC-201ENST00000393955 RRP7BPQ9NSQ0 103 aa13.86□□□□□ -0.19
PC-201ENST00000393955 SNAPC4Q5SXM2 1469 aa13.86□□□□□ -0.19
PC-201ENST00000393955 ABCA5Q8WWZ7 1642 aa13.84□□□□□ -0.19
PC-201ENST00000393955 MTUS2Q5JR59 1369 aa13.84□□□□□ -0.19
PC-201ENST00000393955 FHAD1B1AJZ9 1412 aa13.84□□□□□ -0.19
PC-201ENST00000393955 ERCC6Q03468 1493 aa13.83□□□□□ -0.19
PC-201ENST00000393955 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.2
PC-201ENST00000393955 CUL7Q14999 1698 aa13.82□□□□□ -0.2
PC-201ENST00000393955 FYCO1Q9BQS8 1478 aa13.82□□□□□ -0.2
PC-201ENST00000393955 SENP3Q9H4L4 574 aaPredicted RBP13.81□□□□□ -0.2
PC-201ENST00000393955 LAMC3Q9Y6N6 1575 aa13.81□□□□□ -0.2
PC-201ENST00000393955 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
PC-201ENST00000393955 MAGI3Q5TCQ9 1506 aa13.8□□□□□ -0.2
PC-201ENST00000393955 SAMD9Q5K651 1589 aa13.78□□□□□ -0.2
PC-201ENST00000393955 EFCAB5A4FU69 1503 aa13.78□□□□□ -0.2
PC-201ENST00000393955 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.2
PC-201ENST00000393955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.25e-7■■■□□ 15.3
PC-201ENST00000393955 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.2
PC-201ENST00000393955 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.213e-6■■■□□ 15.3
PC-201ENST00000393955 CDK11AQ9UQ88 783 aaPredicted RBP13.77□□□□□ -0.21
PC-201ENST00000393955 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
PC-201ENST00000393955 GRIN2BQ13224 1484 aa13.75□□□□□ -0.21
PC-201ENST00000393955 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
PC-201ENST00000393955 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
PC-201ENST00000393955 NCOA2Q15596 1464 aa13.72□□□□□ -0.21
PC-201ENST00000393955 FMN1Q68DA7 1419 aa13.71□□□□□ -0.21
PC-201ENST00000393955 KDM6BO15054 1643 aa13.7□□□□□ -0.22
PC-201ENST00000393955 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
PC-201ENST00000393955 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
PC-201ENST00000393955 DENND4BO75064 1496 aaPredicted RBP13.68□□□□□ -0.22
PC-201ENST00000393955 BCANQ96GW7 911 aa13.68□□□□□ -0.22
PC-201ENST00000393955 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
PC-201ENST00000393955 CDK13Q14004 1512 aaKnown RBP13.68□□□□□ -0.22
PC-201ENST00000393955 PPP1R15AO75807 674 aaPredicted RBP13.68□□□□□ -0.22
PC-201ENST00000393955 PTPN23Q9H3S7 1636 aa13.67□□□□□ -0.22
PC-201ENST00000393955 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
PC-201ENST00000393955 NAIPQ13075 1403 aa13.67□□□□□ -0.22
PC-201ENST00000393955 KDM2AQ9Y2K7 1162 aa13.67□□□□□ -0.22
PC-201ENST00000393955 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
PC-201ENST00000393955 NEFLP07196 543 aa13.66□□□□□ -0.22
PC-201ENST00000393955 KDM5BQ9UGL1 1544 aa13.66□□□□□ -0.22
PC-201ENST00000393955 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
PC-201ENST00000393955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.64□□□□□ -0.23
PC-201ENST00000393955 HFM1A2PYH4 1435 aa13.64□□□□□ -0.23
PC-201ENST00000393955 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
PC-201ENST00000393955 TONSLQ96HA7 1378 aa13.63□□□□□ -0.23
PC-201ENST00000393955 ARHGEF11O15085 1522 aa13.63□□□□□ -0.23
PC-201ENST00000393955 UGGT2Q9NYU1 1516 aa13.63□□□□□ -0.23
PC-201ENST00000393955 CHGAP10645 457 aaKnown RBP13.63□□□□□ -0.23
PC-201ENST00000393955 FOXD1Q16676 465 aa13.63□□□□□ -0.23
PC-201ENST00000393955 PLEKHD1A6NEE1 506 aa13.62□□□□□ -0.23
PC-201ENST00000393955 SUPT6HQ7KZ85 1726 aaKnown RBP13.61□□□□□ -0.23
PC-201ENST00000393955 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
PC-201ENST00000393955 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
PC-201ENST00000393955 CFDP1Q9UEE9 299 aaPredicted RBP13.61□□□□□ -0.23
PC-201ENST00000393955 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
PC-201ENST00000393955 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
PC-201ENST00000393955 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
PC-201ENST00000393955 EPRSP07814 1512 aaKnown RBP13.59□□□□□ -0.23
PC-201ENST00000393955 IQGAP2Q13576 1575 aa13.59□□□□□ -0.23
PC-201ENST00000393955 UACAQ9BZF9 1416 aa13.59□□□□□ -0.23
PC-201ENST00000393955 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
PC-201ENST00000393955 EHBP1L1Q8N3D4 1523 aa13.58□□□□□ -0.24
PC-201ENST00000393955 RGL3Q3MIN7 710 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms