RNA–Protein interactions for RNA: ENST00000393955.6

PC-201, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-201ENST00000393955 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
PC-201ENST00000393955 DCAF8L2P0C7V8 631 aa17.94■□□□□ 0.46
PC-201ENST00000393955 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
PC-201ENST00000393955 SUPT5HO00267 1087 aaKnown RBP17.06■□□□□ 0.32
PC-201ENST00000393955 ZCCHC6Q5VYS8 1495 aaKnown RBP16.85■□□□□ 0.29
PC-201ENST00000393955 CCDC180Q9P1Z9 1646 aa16.82■□□□□ 0.28
PC-201ENST00000393955 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
PC-201ENST00000393955 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
PC-201ENST00000393955 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
PC-201ENST00000393955 DCAF1Q9Y4B6 1507 aa16.2■□□□□ 0.18
PC-201ENST00000393955 FAM9AQ8IZU1 332 aaPredicted RBP16.05■□□□□ 0.16
PC-201ENST00000393955 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
PC-201ENST00000393955 LOC105371045A0A1W2PR82 267 aa15.93■□□□□ 0.14
PC-201ENST00000393955 ABCC9O60706 1549 aa15.89■□□□□ 0.13
PC-201ENST00000393955 RSF1Q96T23 1441 aaPredicted RBP15.83■□□□□ 0.12
PC-201ENST00000393955 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
PC-201ENST00000393955 TTBK1Q5TCY1 1321 aaPredicted RBP15.74■□□□□ 0.11
PC-201ENST00000393955 RB1CC1Q8TDY2 1594 aa15.73■□□□□ 0.11
PC-201ENST00000393955 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
PC-201ENST00000393955 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
PC-201ENST00000393955 RANGAP1P46060 587 aaPredicted RBP15.65■□□□□ 0.1
PC-201ENST00000393955 HRCP23327 699 aa15.64■□□□□ 0.09
PC-201ENST00000393955 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
PC-201ENST00000393955 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
PC-201ENST00000393955 PPARGC1BQ86YN6 1023 aaKnown RBP15.6■□□□□ 0.09
PC-201ENST00000393955 NACADO15069 1562 aa15.56■□□□□ 0.08
PC-201ENST00000393955 WIZO95785 1651 aa15.55■□□□□ 0.08
PC-201ENST00000393955 UNC13AQ9UPW8 1703 aa15.35■□□□□ 0.05
PC-201ENST00000393955 TRIM26Q12899 539 aaPredicted RBP15.29■□□□□ 0.04
PC-201ENST00000393955 EIF4G1Q04637 1599 aaKnown RBP15.29■□□□□ 0.04
PC-201ENST00000393955 BAZ1AQ9NRL2 1556 aaPredicted RBP15.29■□□□□ 0.04
PC-201ENST00000393955 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
PC-201ENST00000393955 ABCC8Q09428 1581 aa15.23■□□□□ 0.03
PC-201ENST00000393955 SMARCA4P51532 1647 aa15.2■□□□□ 0.02
PC-201ENST00000393955 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
PC-201ENST00000393955 ATP1B4Q9UN42 357 aaPredicted RBP15.15■□□□□ 0.02
PC-201ENST00000393955 APLP2Q06481 763 aa15.14■□□□□ 0.01
PC-201ENST00000393955 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
PC-201ENST00000393955 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
PC-201ENST00000393955 BICRAQ9NZM4 1560 aa15.13■□□□□ 0.01
PC-201ENST00000393955 RUSC2Q8N2Y8 1516 aa15.06■□□□□ 0
PC-201ENST00000393955 SOGA1O94964 1423 aa15.06■□□□□ 0
PC-201ENST00000393955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.89□□□□□ -0.03
PC-201ENST00000393955 CCER1Q8TC90 406 aaPredicted RBP14.89□□□□□ -0.03
PC-201ENST00000393955 CEP162Q5TB80 1403 aa14.85□□□□□ -0.03
PC-201ENST00000393955 SYNJ1O43426 1573 aa14.84□□□□□ -0.03
PC-201ENST00000393955 ITGAEP38570 1179 aa14.84□□□□□ -0.03
PC-201ENST00000393955 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.03
PC-201ENST00000393955 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
PC-201ENST00000393955 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
PC-201ENST00000393955 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
PC-201ENST00000393955 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.04
PC-201ENST00000393955 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.05
PC-201ENST00000393955 TNIKQ9UKE5 1360 aa14.75□□□□□ -0.05
PC-201ENST00000393955 ZEB1P37275 1124 aaPredicted RBP14.73□□□□□ -0.05
PC-201ENST00000393955 BAZ1BQ9UIG0 1483 aaKnown RBP14.73□□□□□ -0.05
PC-201ENST00000393955 GOLGA3Q08378 1498 aa14.65□□□□□ -0.06
PC-201ENST00000393955 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
PC-201ENST00000393955 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
PC-201ENST00000393955 EEA1Q15075 1411 aa14.63□□□□□ -0.07
PC-201ENST00000393955 ARID3CA6NKF2 412 aa14.58□□□□□ -0.08
PC-201ENST00000393955 KIF21BO75037 1637 aa14.57□□□□□ -0.08
PC-201ENST00000393955 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
PC-201ENST00000393955 CLIP1P30622 1438 aa14.55□□□□□ -0.08
PC-201ENST00000393955 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
PC-201ENST00000393955 FBLN2P98095 1184 aa14.54□□□□□ -0.08
PC-201ENST00000393955 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.08
PC-201ENST00000393955 CUX1P39880 1505 aa14.51□□□□□ -0.09
PC-201ENST00000393955 BIVM-ERCC5R4GMW8 1640 aa14.48□□□□□ -0.09
PC-201ENST00000393955 MYT1Q01538 1121 aa14.47□□□□□ -0.09
PC-201ENST00000393955 NCAPD3P42695 1498 aa14.47□□□□□ -0.09
PC-201ENST00000393955 VPS8Q8N3P4 1428 aa14.46□□□□□ -0.1
PC-201ENST00000393955 YTHDC1Q96MU7 727 aaKnown RBP14.45□□□□□ -0.1
PC-201ENST00000393955 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
PC-201ENST00000393955 PRXQ9BXM0 1461 aa14.42□□□□□ -0.1
PC-201ENST00000393955 KANK4Q5T7N3 995 aaPredicted RBP14.42□□□□□ -0.1
PC-201ENST00000393955 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
PC-201ENST00000393955 ARAP1Q96P48 1450 aa14.41□□□□□ -0.1
PC-201ENST00000393955 DIEXFQ68CQ4 756 aaKnown RBP14.39□□□□□ -0.11
PC-201ENST00000393955 CFTRP13569 1480 aa14.38□□□□□ -0.11
PC-201ENST00000393955 NEUROD1Q13562 356 aa14.37□□□□□ -0.11
PC-201ENST00000393955 CNGB1Q14028 1251 aaPredicted RBP14.34□□□□□ -0.11
PC-201ENST00000393955 ERICH3Q5RHP9 1530 aa14.3□□□□□ -0.12
PC-201ENST00000393955 MYT1LQ9UL68 1186 aa14.28□□□□□ -0.12
PC-201ENST00000393955 ARHGAP35Q9NRY4 1499 aa14.27□□□□□ -0.12
PC-201ENST00000393955 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
PC-201ENST00000393955 ZNF316A6NFI3 1004 aaPredicted RBP14.25□□□□□ -0.13
PC-201ENST00000393955 IGF1RP08069 1367 aa14.25□□□□□ -0.13
PC-201ENST00000393955 ACIN1Q9UKV3 1341 aaKnown RBP14.24□□□□□ -0.13
PC-201ENST00000393955 CUX2O14529 1486 aa14.24□□□□□ -0.13
PC-201ENST00000393955 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
PC-201ENST00000393955 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
PC-201ENST00000393955 POLR3GLQ9BT43 218 aa14.21□□□□□ -0.13
PC-201ENST00000393955 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.13
PC-201ENST00000393955 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.13
PC-201ENST00000393955 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
PC-201ENST00000393955 MIER1Q8N108 512 aa14.2□□□□□ -0.14
PC-201ENST00000393955 NESP48681 1621 aa14.2□□□□□ -0.14
PC-201ENST00000393955 DHX57Q6P158 1386 aaKnown RBP14.18□□□□□ -0.14
PC-201ENST00000393955 RAD54L2Q9Y4B4 1467 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms