RNA–Protein interactions for RNA: ENST00000393238.7

TMCC1-201, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC1, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-201ENST00000393238 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.37
TMCC1-201ENST00000393238 KANK1Q14678 1352 aa12.76□□□□□ -0.37
TMCC1-201ENST00000393238 EIF4G1Q04637 1599 aaKnown RBP12.76□□□□□ -0.37
TMCC1-201ENST00000393238 SOGA1O94964 1423 aa12.76□□□□□ -0.37
TMCC1-201ENST00000393238 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
TMCC1-201ENST00000393238 DIEXFQ68CQ4 756 aaKnown RBP12.74□□□□□ -0.37
TMCC1-201ENST00000393238 CCNB3Q8WWL7 1395 aa12.73□□□□□ -0.37
TMCC1-201ENST00000393238 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
TMCC1-201ENST00000393238 ABCC8Q09428 1581 aa12.71□□□□□ -0.37
TMCC1-201ENST00000393238 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
TMCC1-201ENST00000393238 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
TMCC1-201ENST00000393238 A0A0G2JS52 829 aa12.69□□□□□ -0.38
TMCC1-201ENST00000393238 KDM2AQ9Y2K7 1162 aa12.69□□□□□ -0.38
TMCC1-201ENST00000393238 RRP7BPQ9NSQ0 103 aa12.67□□□□□ -0.38
TMCC1-201ENST00000393238 ZBTB7CA1YPR0 619 aa12.65□□□□□ -0.38
TMCC1-201ENST00000393238 TNIKQ9UKE5 1360 aa12.65□□□□□ -0.39
TMCC1-201ENST00000393238 EFCAB2Q5VUJ9 269 aa12.65□□□□□ -0.39
TMCC1-201ENST00000393238 MLECQ14165 292 aa12.63□□□□□ -0.39
TMCC1-201ENST00000393238 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
TMCC1-201ENST00000393238 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
TMCC1-201ENST00000393238 ATAD2BQ9ULI0 1458 aa12.62□□□□□ -0.39
TMCC1-201ENST00000393238 POGKQ9P215 609 aa12.62□□□□□ -0.39
TMCC1-201ENST00000393238 WDR43Q15061 677 aaKnown RBP eCLIP12.62□□□□□ -0.39
TMCC1-201ENST00000393238 CEP162Q5TB80 1403 aa12.61□□□□□ -0.39
TMCC1-201ENST00000393238 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
TMCC1-201ENST00000393238 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
TMCC1-201ENST00000393238 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
TMCC1-201ENST00000393238 TMC1Q8TDI8 760 aa12.58□□□□□ -0.4
TMCC1-201ENST00000393238 CFAP53Q96M91 514 aa12.58□□□□□ -0.4
TMCC1-201ENST00000393238 FMN1Q68DA7 1419 aa12.56□□□□□ -0.4
TMCC1-201ENST00000393238 RGL3Q3MIN7 710 aa12.56□□□□□ -0.4
TMCC1-201ENST00000393238 FANCD2Q9BXW9 1451 aa12.56□□□□□ -0.4
TMCC1-201ENST00000393238 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
TMCC1-201ENST00000393238 RSPH4AQ5TD94 716 aa12.54□□□□□ -0.4
TMCC1-201ENST00000393238 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMCC1-201ENST00000393238 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.54□□□□□ -0.4
TMCC1-201ENST00000393238 JPH4Q96JJ6 628 aa12.53□□□□□ -0.4
TMCC1-201ENST00000393238 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
TMCC1-201ENST00000393238 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
TMCC1-201ENST00000393238 GGT6Q6P531 493 aa12.52□□□□□ -0.4
TMCC1-201ENST00000393238 EID1Q9Y6B2 187 aa12.52□□□□□ -0.41
TMCC1-201ENST00000393238 CYB5RLQ6IPT4 315 aa12.51□□□□□ -0.41
TMCC1-201ENST00000393238 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
TMCC1-201ENST00000393238 SENP3Q9H4L4 574 aaPredicted RBP12.5□□□□□ -0.41
TMCC1-201ENST00000393238 KNSTRNQ9Y448 316 aa12.47□□□□□ -0.41
TMCC1-201ENST00000393238 RAPGEF2Q9Y4G8 1499 aa12.47□□□□□ -0.41
TMCC1-201ENST00000393238 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
TMCC1-201ENST00000393238 PTPRGP23470 1445 aa12.46□□□□□ -0.41
TMCC1-201ENST00000393238 MYH16Q9H6N6 1097 aa12.46□□□□□ -0.41
TMCC1-201ENST00000393238 CARD11Q9BXL7 1154 aa12.45□□□□□ -0.42
TMCC1-201ENST00000393238 NCAPD3P42695 1498 aa12.45□□□□□ -0.42
TMCC1-201ENST00000393238 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
TMCC1-201ENST00000393238 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
TMCC1-201ENST00000393238 ARHGAP35Q9NRY4 1499 aa12.43□□□□□ -0.42
TMCC1-201ENST00000393238 SPAG9O60271 1321 aaKnown RBP12.43□□□□□ -0.42
TMCC1-201ENST00000393238 NPHP1O15259 732 aa12.43□□□□□ -0.42
TMCC1-201ENST00000393238 ANKRD30AQ9BXX3 1397 aa12.43□□□□□ -0.42
TMCC1-201ENST00000393238 CCDC18Q5T9S5 1454 aa12.41□□□□□ -0.42
TMCC1-201ENST00000393238 ARXQ96QS3 562 aa12.4□□□□□ -0.43
TMCC1-201ENST00000393238 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
TMCC1-201ENST00000393238 MAPK8IP3Q9UPT6 1336 aa12.39□□□□□ -0.43
TMCC1-201ENST00000393238 PPM1GO15355 546 aaPredicted RBP12.39□□□□□ -0.43
TMCC1-201ENST00000393238 WASHC2CQ9Y4E1 1318 aa12.38□□□□□ -0.43
TMCC1-201ENST00000393238 FAM9BQ8IZU0 186 aa12.38□□□□□ -0.43
TMCC1-201ENST00000393238 DDX10Q13206 875 aaKnown RBP12.38□□□□□ -0.43
TMCC1-201ENST00000393238 KIF3BO15066 747 aa12.38□□□□□ -0.43
TMCC1-201ENST00000393238 WIZO95785 1651 aa12.37□□□□□ -0.43
TMCC1-201ENST00000393238 TMF1P82094 1093 aa12.37□□□□□ -0.43
TMCC1-201ENST00000393238 SRPK2P78362 688 aaKnown RBP12.37□□□□□ -0.43
TMCC1-201ENST00000393238 MRS2Q9HD23 443 aa12.36□□□□□ -0.43
TMCC1-201ENST00000393238 HDGFL2Q7Z4V5 671 aaPredicted RBP12.36□□□□□ -0.43
TMCC1-201ENST00000393238 FAM69CQ0P6D2 419 aa12.36□□□□□ -0.43
TMCC1-201ENST00000393238 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
TMCC1-201ENST00000393238 HNRNPUQ00839 825 aaKnown RBP eCLIP12.34□□□□□ -0.43
TMCC1-201ENST00000393238 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
TMCC1-201ENST00000393238 DCAF11Q8TEB1 546 aa12.32□□□□□ -0.44
TMCC1-201ENST00000393238 VPS8Q8N3P4 1428 aa12.32□□□□□ -0.44
TMCC1-201ENST00000393238 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
TMCC1-201ENST00000393238 TIMELESSQ9UNS1 1208 aa12.3□□□□□ -0.44
TMCC1-201ENST00000393238 EIF3AQ14152 1382 aaKnown RBP12.3□□□□□ -0.44
TMCC1-201ENST00000393238 HSP90AA1P07900 732 aaKnown RBP12.3□□□□□ -0.44
TMCC1-201ENST00000393238 CSB-PGBD3P0DP91 1061 aa12.3□□□□□ -0.44
TMCC1-201ENST00000393238 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
TMCC1-201ENST00000393238 EIF5BO60841 1220 aaKnown RBP12.29□□□□□ -0.44
TMCC1-201ENST00000393238 NUP155O75694 1391 aa12.29□□□□□ -0.44
TMCC1-201ENST00000393238 IFT140Q96RY7 1462 aa12.29□□□□□ -0.44
TMCC1-201ENST00000393238 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
TMCC1-201ENST00000393238 CCDC9Q9Y3X0 531 aaKnown RBP12.29□□□□□ -0.44
TMCC1-201ENST00000393238 PKD2Q13563 968 aa12.28□□□□□ -0.44
TMCC1-201ENST00000393238 GRIN2BQ13224 1484 aa12.28□□□□□ -0.44
TMCC1-201ENST00000393238 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.44
TMCC1-201ENST00000393238 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.445e-6■■□□□ 13.2
TMCC1-201ENST00000393238 STK26Q9P289 416 aa12.27□□□□□ -0.44
TMCC1-201ENST00000393238 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.45
TMCC1-201ENST00000393238 TMX4Q9H1E5 349 aaPredicted RBP12.26□□□□□ -0.45
TMCC1-201ENST00000393238 UACAQ9BZF9 1416 aa12.25□□□□□ -0.45
TMCC1-201ENST00000393238 CC2D2AQ9P2K1 1620 aa12.25□□□□□ -0.45
TMCC1-201ENST00000393238 FHOD3Q2V2M9 1422 aa12.25□□□□□ -0.45
TMCC1-201ENST00000393238 ANP32AP39687 249 aaKnown RBP12.23□□□□□ -0.45
TMCC1-201ENST00000393238 SETD5Q9C0A6 1442 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms