RNA–Protein interactions for RNA: ENST00000392754.7

FAM53B-203, Transcript of family with sequence similarity 53 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM53B, Length 3,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-203ENST00000392754 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
FAM53B-203ENST00000392754 POLA1P09884 1462 aaPredicted RBP19.08■□□□□ 0.64
FAM53B-203ENST00000392754 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
FAM53B-203ENST00000392754 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
FAM53B-203ENST00000392754 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
FAM53B-203ENST00000392754 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
FAM53B-203ENST00000392754 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.64
FAM53B-203ENST00000392754 BCANQ96GW7 911 aa18.99■□□□□ 0.63
FAM53B-203ENST00000392754 CUX2O14529 1486 aa18.98■□□□□ 0.63
FAM53B-203ENST00000392754 DDX10Q13206 875 aaKnown RBP18.97■□□□□ 0.63
FAM53B-203ENST00000392754 NEFLP07196 543 aa18.96■□□□□ 0.63
FAM53B-203ENST00000392754 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
FAM53B-203ENST00000392754 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
FAM53B-203ENST00000392754 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
FAM53B-203ENST00000392754 SUPT16HQ9Y5B9 1047 aaKnown RBP18.92■□□□□ 0.62
FAM53B-203ENST00000392754 PRXQ9BXM0 1461 aa18.9■□□□□ 0.62
FAM53B-203ENST00000392754 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
FAM53B-203ENST00000392754 SIN3AQ96ST3 1273 aa18.89■□□□□ 0.61
FAM53B-203ENST00000392754 RAB3GAP2Q9H2M9 1393 aa18.87■□□□□ 0.61
FAM53B-203ENST00000392754 ERICH3Q5RHP9 1530 aa18.87■□□□□ 0.61
FAM53B-203ENST00000392754 PBRM1Q86U86 1689 aa18.86■□□□□ 0.61
FAM53B-203ENST00000392754 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.6
FAM53B-203ENST00000392754 ZNF608Q9ULD9 1512 aaPredicted RBP18.83■□□□□ 0.6
FAM53B-203ENST00000392754 ANP32CO43423 234 aa18.82■□□□□ 0.6
FAM53B-203ENST00000392754 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
FAM53B-203ENST00000392754 FKBP8Q14318 412 aa18.81■□□□□ 0.6
FAM53B-203ENST00000392754 EIF4G3O43432 1585 aaKnown RBP18.81■□□□□ 0.6
FAM53B-203ENST00000392754 RRBP1Q9P2E9 1410 aaKnown RBP18.8■□□□□ 0.6
FAM53B-203ENST00000392754 IFT140Q96RY7 1462 aa18.79■□□□□ 0.6
FAM53B-203ENST00000392754 ARHGAP35Q9NRY4 1499 aa18.78■□□□□ 0.6
FAM53B-203ENST00000392754 SETD5Q9C0A6 1442 aa18.78■□□□□ 0.6
FAM53B-203ENST00000392754 TRIM52Q96A61 297 aa18.77■□□□□ 0.6
FAM53B-203ENST00000392754 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.59
FAM53B-203ENST00000392754 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.59
FAM53B-203ENST00000392754 IGF1RP08069 1367 aa18.73■□□□□ 0.59
FAM53B-203ENST00000392754 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
FAM53B-203ENST00000392754 TONSLQ96HA7 1378 aa18.73■□□□□ 0.59
FAM53B-203ENST00000392754 CUL7Q14999 1698 aa18.7■□□□□ 0.58
FAM53B-203ENST00000392754 FHAD1B1AJZ9 1412 aa18.7■□□□□ 0.58
FAM53B-203ENST00000392754 MTUS2Q5JR59 1369 aa18.66■□□□□ 0.58
FAM53B-203ENST00000392754 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
FAM53B-203ENST00000392754 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
FAM53B-203ENST00000392754 TSHZ2Q9NRE2 1034 aa18.62■□□□□ 0.57
FAM53B-203ENST00000392754 FHOD3Q2V2M9 1422 aa18.62■□□□□ 0.57
FAM53B-203ENST00000392754 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
FAM53B-203ENST00000392754 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
FAM53B-203ENST00000392754 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
FAM53B-203ENST00000392754 CHIC2Q9UKJ5 165 aa18.6■□□□□ 0.57
FAM53B-203ENST00000392754 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.57
FAM53B-203ENST00000392754 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
FAM53B-203ENST00000392754 TIMELESSQ9UNS1 1208 aa18.57■□□□□ 0.56
FAM53B-203ENST00000392754 CTTNBP2Q8WZ74 1663 aa18.57■□□□□ 0.56
FAM53B-203ENST00000392754 TIAM1Q13009 1591 aa18.57■□□□□ 0.56
FAM53B-203ENST00000392754 CNGB1Q14028 1251 aaPredicted RBP18.57■□□□□ 0.56
FAM53B-203ENST00000392754 HNRNPUQ00839 825 aaKnown RBP eCLIP18.56■□□□□ 0.56
FAM53B-203ENST00000392754 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
FAM53B-203ENST00000392754 ERICH6Q7L0X2 663 aa18.53■□□□□ 0.56
FAM53B-203ENST00000392754 CHD1O14646 1710 aa18.51■□□□□ 0.55
FAM53B-203ENST00000392754 POLR3GLQ9BT43 218 aa18.5■□□□□ 0.55
FAM53B-203ENST00000392754 IRX6P78412 446 aaPredicted RBP18.49■□□□□ 0.55
FAM53B-203ENST00000392754 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
FAM53B-203ENST00000392754 MAGI1Q96QZ7 1491 aaPredicted RBP18.48■□□□□ 0.55
FAM53B-203ENST00000392754 MAPKBP1O60336 1514 aa18.48■□□□□ 0.55
FAM53B-203ENST00000392754 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.55
FAM53B-203ENST00000392754 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
FAM53B-203ENST00000392754 GRIN2AQ12879 1464 aa18.43■□□□□ 0.54
FAM53B-203ENST00000392754 FMN1Q68DA7 1419 aa18.43■□□□□ 0.54
FAM53B-203ENST00000392754 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
FAM53B-203ENST00000392754 CDK11AQ9UQ88 783 aaPredicted RBP18.41■□□□□ 0.54
FAM53B-203ENST00000392754 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
FAM53B-203ENST00000392754 PCF11O94913 1555 aaKnown RBP18.4■□□□□ 0.54
FAM53B-203ENST00000392754 FAM9BQ8IZU0 186 aa18.4■□□□□ 0.54
FAM53B-203ENST00000392754 EIF4G2P78344 907 aaKnown RBP eCLIP18.39■□□□□ 0.537e-18■■■■□ 21.9
FAM53B-203ENST00000392754 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
FAM53B-203ENST00000392754 FGD6Q6ZV73 1430 aa18.38■□□□□ 0.53
FAM53B-203ENST00000392754 CASKIN1Q8WXD9 1431 aa18.36■□□□□ 0.53
FAM53B-203ENST00000392754 ZNF326Q5BKZ1 582 aaKnown RBP18.36■□□□□ 0.53
FAM53B-203ENST00000392754 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
FAM53B-203ENST00000392754 FYCO1Q9BQS8 1478 aa18.35■□□□□ 0.53
FAM53B-203ENST00000392754 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
FAM53B-203ENST00000392754 IQGAP2Q13576 1575 aa18.33■□□□□ 0.52
FAM53B-203ENST00000392754 SAMD9Q5K651 1589 aa18.32■□□□□ 0.52
FAM53B-203ENST00000392754 FOXD1Q16676 465 aa18.32■□□□□ 0.52
FAM53B-203ENST00000392754 MRS2Q9HD23 443 aa18.31■□□□□ 0.52
FAM53B-203ENST00000392754 NUP160Q12769 1436 aa18.3■□□□□ 0.52
FAM53B-203ENST00000392754 UACAQ9BZF9 1416 aa18.29■□□□□ 0.52
FAM53B-203ENST00000392754 EFCAB5A4FU69 1503 aa18.26■□□□□ 0.51
FAM53B-203ENST00000392754 ZNF777Q9ULD5 760 aaPredicted RBP18.25■□□□□ 0.51
FAM53B-203ENST00000392754 SLC4A1APQ9BWU0 796 aaKnown RBP18.25■□□□□ 0.51
FAM53B-203ENST00000392754 MYOM3Q5VTT5 1437 aa18.24■□□□□ 0.51
FAM53B-203ENST00000392754 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.24■□□□□ 0.512e-8■■■■■ 65.9
FAM53B-203ENST00000392754 NCOA2Q15596 1464 aa18.24■□□□□ 0.51
FAM53B-203ENST00000392754 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
FAM53B-203ENST00000392754 CHMP7Q8WUX9 453 aaPredicted RBP18.24■□□□□ 0.51
FAM53B-203ENST00000392754 MPHOSPH9Q99550 1183 aa18.24■□□□□ 0.51
FAM53B-203ENST00000392754 FBLN2P98095 1184 aa18.23■□□□□ 0.51
FAM53B-203ENST00000392754 L3MBTL2Q969R5 705 aa18.22■□□□□ 0.51
FAM53B-203ENST00000392754 HFM1A2PYH4 1435 aa18.22■□□□□ 0.51
FAM53B-203ENST00000392754 UGGT2Q9NYU1 1516 aa18.22■□□□□ 0.51
FAM53B-203ENST00000392754 CLASP1Q7Z460 1538 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms