RNA–Protein interactions for RNA: ENST00000392754.7

FAM53B-203, Transcript of family with sequence similarity 53 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM53B, Length 3,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-203ENST00000392754 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
FAM53B-203ENST00000392754 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
FAM53B-203ENST00000392754 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.28
FAM53B-203ENST00000392754 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
FAM53B-203ENST00000392754 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
FAM53B-203ENST00000392754 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
FAM53B-203ENST00000392754 ABCC9O60706 1549 aa22.32■■□□□ 1.16
FAM53B-203ENST00000392754 DCAF1Q9Y4B6 1507 aa22.07■■□□□ 1.12
FAM53B-203ENST00000392754 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.1
FAM53B-203ENST00000392754 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
FAM53B-203ENST00000392754 PCGF6Q9BYE7 350 aa21.83■■□□□ 1.09
FAM53B-203ENST00000392754 NACADO15069 1562 aa21.81■■□□□ 1.08
FAM53B-203ENST00000392754 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
FAM53B-203ENST00000392754 HRCP23327 699 aa21.67■■□□□ 1.06
FAM53B-203ENST00000392754 UNC13AQ9UPW8 1703 aa21.58■■□□□ 1.05
FAM53B-203ENST00000392754 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
FAM53B-203ENST00000392754 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
FAM53B-203ENST00000392754 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
FAM53B-203ENST00000392754 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
FAM53B-203ENST00000392754 FAM9AQ8IZU1 332 aaPredicted RBP21.26■□□□□ 0.99
FAM53B-203ENST00000392754 BICRAQ9NZM4 1560 aa21.22■□□□□ 0.99
FAM53B-203ENST00000392754 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
FAM53B-203ENST00000392754 TRIM26Q12899 539 aaPredicted RBP21.14■□□□□ 0.98
FAM53B-203ENST00000392754 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
FAM53B-203ENST00000392754 ZEB1P37275 1124 aaPredicted RBP20.86■□□□□ 0.93
FAM53B-203ENST00000392754 CECR2Q9BXF3 1484 aa20.83■□□□□ 0.93
FAM53B-203ENST00000392754 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
FAM53B-203ENST00000392754 MROH2BQ7Z745 1585 aa20.69■□□□□ 0.9
FAM53B-203ENST00000392754 SMARCA4P51532 1647 aa20.65■□□□□ 0.9
FAM53B-203ENST00000392754 TTBK1Q5TCY1 1321 aaPredicted RBP20.64■□□□□ 0.9
FAM53B-203ENST00000392754 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
FAM53B-203ENST00000392754 WIZO95785 1651 aa20.58■□□□□ 0.88
FAM53B-203ENST00000392754 CCER1Q8TC90 406 aaPredicted RBP20.55■□□□□ 0.88
FAM53B-203ENST00000392754 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
FAM53B-203ENST00000392754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
FAM53B-203ENST00000392754 PEG3Q9GZU2 1588 aa20.41■□□□□ 0.86
FAM53B-203ENST00000392754 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
FAM53B-203ENST00000392754 CC2D2AQ9P2K1 1620 aa20.29■□□□□ 0.84
FAM53B-203ENST00000392754 ATAD2BQ9ULI0 1458 aa20.29■□□□□ 0.84
FAM53B-203ENST00000392754 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
FAM53B-203ENST00000392754 SMARCA2P51531 1590 aa20.23■□□□□ 0.83
FAM53B-203ENST00000392754 PELP1Q8IZL8 1130 aaKnown RBP20.15■□□□□ 0.82
FAM53B-203ENST00000392754 HMGXB3Q12766 1538 aa20.13■□□□□ 0.81
FAM53B-203ENST00000392754 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
FAM53B-203ENST00000392754 CENPBP07199 599 aaPredicted RBP20.11■□□□□ 0.81
FAM53B-203ENST00000392754 RANGAP1P46060 587 aaPredicted RBP20.11■□□□□ 0.81
FAM53B-203ENST00000392754 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
FAM53B-203ENST00000392754 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
FAM53B-203ENST00000392754 DIEXFQ68CQ4 756 aaKnown RBP20.09■□□□□ 0.81
FAM53B-203ENST00000392754 APLP2Q06481 763 aa20.06■□□□□ 0.8
FAM53B-203ENST00000392754 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
FAM53B-203ENST00000392754 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
FAM53B-203ENST00000392754 HNRNPUL2Q1KMD3 747 aaKnown RBP19.98■□□□□ 0.79
FAM53B-203ENST00000392754 YTHDC1Q96MU7 727 aaKnown RBP19.96■□□□□ 0.79
FAM53B-203ENST00000392754 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
FAM53B-203ENST00000392754 ACIN1Q9UKV3 1341 aaKnown RBP19.94■□□□□ 0.78
FAM53B-203ENST00000392754 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
FAM53B-203ENST00000392754 CEP162Q5TB80 1403 aa19.91■□□□□ 0.78
FAM53B-203ENST00000392754 NEUROD1Q13562 356 aa19.89■□□□□ 0.77
FAM53B-203ENST00000392754 GTF3C3Q9Y5Q9 886 aa19.87■□□□□ 0.77
FAM53B-203ENST00000392754 SOGA1O94964 1423 aa19.85■□□□□ 0.77
FAM53B-203ENST00000392754 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
FAM53B-203ENST00000392754 TNIKQ9UKE5 1360 aa19.78■□□□□ 0.76
FAM53B-203ENST00000392754 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
FAM53B-203ENST00000392754 EEA1Q15075 1411 aa19.7■□□□□ 0.74
FAM53B-203ENST00000392754 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
FAM53B-203ENST00000392754 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
FAM53B-203ENST00000392754 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.749e-6■■■■■ 50.1
FAM53B-203ENST00000392754 CFTRP13569 1480 aa19.63■□□□□ 0.73
FAM53B-203ENST00000392754 NESP48681 1621 aa19.61■□□□□ 0.73
FAM53B-203ENST00000392754 CLIP1P30622 1438 aa19.59■□□□□ 0.73
FAM53B-203ENST00000392754 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
FAM53B-203ENST00000392754 ITGAEP38570 1179 aa19.53■□□□□ 0.72
FAM53B-203ENST00000392754 MIER1Q8N108 512 aa19.53■□□□□ 0.72
FAM53B-203ENST00000392754 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.71
FAM53B-203ENST00000392754 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
FAM53B-203ENST00000392754 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
FAM53B-203ENST00000392754 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
FAM53B-203ENST00000392754 ATP1B4Q9UN42 357 aaPredicted RBP19.39■□□□□ 0.69
FAM53B-203ENST00000392754 BIVM-ERCC5R4GMW8 1640 aa19.38■□□□□ 0.69
FAM53B-203ENST00000392754 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
FAM53B-203ENST00000392754 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
FAM53B-203ENST00000392754 CUX1P39880 1505 aa19.36■□□□□ 0.69
FAM53B-203ENST00000392754 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
FAM53B-203ENST00000392754 RAPGEF2Q9Y4G8 1499 aa19.32■□□□□ 0.68
FAM53B-203ENST00000392754 URB2Q14146 1524 aaKnown RBP19.24■□□□□ 0.67
FAM53B-203ENST00000392754 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
FAM53B-203ENST00000392754 MYT1Q01538 1121 aa19.22■□□□□ 0.67
FAM53B-203ENST00000392754 DNMBPQ6XZF7 1577 aa19.21■□□□□ 0.67
FAM53B-203ENST00000392754 KANK4Q5T7N3 995 aaPredicted RBP19.2■□□□□ 0.66
FAM53B-203ENST00000392754 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
FAM53B-203ENST00000392754 TOPBP1Q92547 1522 aa19.18■□□□□ 0.66
FAM53B-203ENST00000392754 KIF21BO75037 1637 aa19.18■□□□□ 0.66
FAM53B-203ENST00000392754 FAM50AQ14320 339 aaKnown RBP19.17■□□□□ 0.66
FAM53B-203ENST00000392754 FGD5Q6ZNL6 1462 aa19.12■□□□□ 0.65
FAM53B-203ENST00000392754 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
FAM53B-203ENST00000392754 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
FAM53B-203ENST00000392754 WDR62O43379 1518 aa19.1■□□□□ 0.65
FAM53B-203ENST00000392754 CLSPNQ9HAW4 1339 aa19.1■□□□□ 0.65
FAM53B-203ENST00000392754 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms