RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
TRA2A-202ENST00000392502 FANCIQ9NVI1 1328 aa23.3■■□□□ 1.32
TRA2A-202ENST00000392502 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
TRA2A-202ENST00000392502 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
TRA2A-202ENST00000392502 IGF1RP08069 1367 aa23.26■■□□□ 1.31
TRA2A-202ENST00000392502 PDS5BQ9NTI5 1447 aa23.24■■□□□ 1.31
TRA2A-202ENST00000392502 SLC24A1O60721 1099 aa23.24■■□□□ 1.31
TRA2A-202ENST00000392502 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
TRA2A-202ENST00000392502 ARHGAP35Q9NRY4 1499 aa23.2■■□□□ 1.3
TRA2A-202ENST00000392502 KANK4Q5T7N3 995 aaPredicted RBP23.2■■□□□ 1.3
TRA2A-202ENST00000392502 DEKP35659 375 aaKnown RBP23.18■■□□□ 1.3
TRA2A-202ENST00000392502 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.29
TRA2A-202ENST00000392502 MSH5O43196 834 aa23.13■■□□□ 1.29
TRA2A-202ENST00000392502 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
TRA2A-202ENST00000392502 ABCA10Q8WWZ4 1543 aa23.12■■□□□ 1.29
TRA2A-202ENST00000392502 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
TRA2A-202ENST00000392502 EIF5BO60841 1220 aaKnown RBP23.12■■□□□ 1.29
TRA2A-202ENST00000392502 CUL7Q14999 1698 aa23.08■■□□□ 1.29
TRA2A-202ENST00000392502 WDR97A6NE52 1622 aa23.08■■□□□ 1.29
TRA2A-202ENST00000392502 POLA1P09884 1462 aaPredicted RBP23.06■■□□□ 1.28
TRA2A-202ENST00000392502 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
TRA2A-202ENST00000392502 SALL2Q9Y467 1007 aaPredicted RBP23.03■■□□□ 1.28
TRA2A-202ENST00000392502 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
TRA2A-202ENST00000392502 DAXXQ9UER7 740 aaPredicted RBP22.98■■□□□ 1.27
TRA2A-202ENST00000392502 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
TRA2A-202ENST00000392502 MAP3K1Q13233 1512 aa22.98■■□□□ 1.27
TRA2A-202ENST00000392502 NEFLP07196 543 aa22.95■■□□□ 1.26
TRA2A-202ENST00000392502 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
TRA2A-202ENST00000392502 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
TRA2A-202ENST00000392502 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
TRA2A-202ENST00000392502 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
TRA2A-202ENST00000392502 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
TRA2A-202ENST00000392502 FKBP8Q14318 412 aa22.91■■□□□ 1.26
TRA2A-202ENST00000392502 EFCAB5A4FU69 1503 aa22.9■■□□□ 1.26
TRA2A-202ENST00000392502 WDR62O43379 1518 aa22.9■■□□□ 1.26
TRA2A-202ENST00000392502 TIAM1Q13009 1591 aa22.88■■□□□ 1.25
TRA2A-202ENST00000392502 CCNB3Q8WWL7 1395 aa22.85■■□□□ 1.25
TRA2A-202ENST00000392502 DHX57Q6P158 1386 aaKnown RBP22.84■■□□□ 1.25
TRA2A-202ENST00000392502 TDRD9Q8NDG6 1382 aaKnown RBP22.83■■□□□ 1.24
TRA2A-202ENST00000392502 FHAD1B1AJZ9 1412 aa22.83■■□□□ 1.24
TRA2A-202ENST00000392502 FHOD3Q2V2M9 1422 aa22.83■■□□□ 1.24
TRA2A-202ENST00000392502 CFAP43Q8NDM7 1665 aa22.82■■□□□ 1.24
TRA2A-202ENST00000392502 PCF11O94913 1555 aaKnown RBP22.82■■□□□ 1.24
TRA2A-202ENST00000392502 ITGAEP38570 1179 aa22.82■■□□□ 1.24
TRA2A-202ENST00000392502 BCANQ96GW7 911 aa22.81■■□□□ 1.24
TRA2A-202ENST00000392502 LRRC9Q6ZRR7 1453 aa22.79■■□□□ 1.24
TRA2A-202ENST00000392502 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
TRA2A-202ENST00000392502 PKNOX2Q96KN3 472 aa22.77■■□□□ 1.24
TRA2A-202ENST00000392502 ATP1B4Q9UN42 357 aaPredicted RBP22.77■■□□□ 1.24
TRA2A-202ENST00000392502 CDK11AQ9UQ88 783 aaPredicted RBP22.76■■□□□ 1.23
TRA2A-202ENST00000392502 AQRO60306 1485 aaKnown RBP eCLIP22.76■■□□□ 1.232e-7■■□□□ 14.5
TRA2A-202ENST00000392502 PHLDB1Q86UU1 1377 aa22.74■■□□□ 1.23
TRA2A-202ENST00000392502 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
TRA2A-202ENST00000392502 CCDC136Q96JN2 1154 aa22.71■■□□□ 1.23
TRA2A-202ENST00000392502 FYCO1Q9BQS8 1478 aa22.7■■□□□ 1.22
TRA2A-202ENST00000392502 PBRM1Q86U86 1689 aa22.69■■□□□ 1.22
TRA2A-202ENST00000392502 SAMD9Q5K651 1589 aa22.68■■□□□ 1.22
TRA2A-202ENST00000392502 CASKIN1Q8WXD9 1431 aa22.65■■□□□ 1.22
TRA2A-202ENST00000392502 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
TRA2A-202ENST00000392502 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
TRA2A-202ENST00000392502 FAM50AQ14320 339 aaKnown RBP22.61■■□□□ 1.21
TRA2A-202ENST00000392502 FMN1Q68DA7 1419 aa22.61■■□□□ 1.21
TRA2A-202ENST00000392502 SNAPC4Q5SXM2 1469 aa22.59■■□□□ 1.21
TRA2A-202ENST00000392502 NOP58Q9Y2X3 529 aaKnown RBP22.58■■□□□ 1.2
TRA2A-202ENST00000392502 RTL5Q5HYW3 569 aaPredicted RBP22.57■■□□□ 1.2
TRA2A-202ENST00000392502 ADAMTS12P58397 1594 aa22.56■■□□□ 1.2
TRA2A-202ENST00000392502 LRRIQ1Q96JM4 1722 aa22.53■■□□□ 1.2
TRA2A-202ENST00000392502 SETD5Q9C0A6 1442 aa22.53■■□□□ 1.2
TRA2A-202ENST00000392502 GLIPR1L2Q4G1C9 344 aa22.52■■□□□ 1.2
TRA2A-202ENST00000392502 MAPKBP1O60336 1514 aa22.51■■□□□ 1.19
TRA2A-202ENST00000392502 ZNF608Q9ULD9 1512 aaPredicted RBP22.51■■□□□ 1.19
TRA2A-202ENST00000392502 C11orf95C9JLR9 678 aaPredicted RBP22.51■■□□□ 1.19
TRA2A-202ENST00000392502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.49■■□□□ 1.191e-7■■□□□ 12.6
TRA2A-202ENST00000392502 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.48■■□□□ 1.19
TRA2A-202ENST00000392502 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
TRA2A-202ENST00000392502 IL27Q8NEV9 243 aa22.47■■□□□ 1.19
TRA2A-202ENST00000392502 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
TRA2A-202ENST00000392502 MTUS2Q5JR59 1369 aa22.44■■□□□ 1.18
TRA2A-202ENST00000392502 IQGAP2Q13576 1575 aa22.44■■□□□ 1.18
TRA2A-202ENST00000392502 FGD6Q6ZV73 1430 aa22.42■■□□□ 1.18
TRA2A-202ENST00000392502 PODXL2Q9NZ53 605 aa22.4■■□□□ 1.18
TRA2A-202ENST00000392502 NBR1Q14596 966 aa22.38■■□□□ 1.17
TRA2A-202ENST00000392502 RSPH6AQ9H0K4 717 aa22.38■■□□□ 1.17
TRA2A-202ENST00000392502 CCDC18Q5T9S5 1454 aa22.38■■□□□ 1.17
TRA2A-202ENST00000392502 USP35Q9P2H5 1018 aa22.37■■□□□ 1.17
TRA2A-202ENST00000392502 EHBP1L1Q8N3D4 1523 aa22.37■■□□□ 1.17
TRA2A-202ENST00000392502 SIN3AQ96ST3 1273 aa22.37■■□□□ 1.17
TRA2A-202ENST00000392502 HECW1Q76N89 1606 aa22.36■■□□□ 1.17
TRA2A-202ENST00000392502 CCER2I3L3R5 266 aa22.36■■□□□ 1.17
TRA2A-202ENST00000392502 NCOA2Q15596 1464 aa22.36■■□□□ 1.17
TRA2A-202ENST00000392502 UGGT2Q9NYU1 1516 aa22.36■■□□□ 1.17
TRA2A-202ENST00000392502 MAGI3Q5TCQ9 1506 aa22.35■■□□□ 1.17
TRA2A-202ENST00000392502 SUPT6HQ7KZ85 1726 aaKnown RBP22.35■■□□□ 1.17
TRA2A-202ENST00000392502 PTPRKQ15262 1439 aa22.35■■□□□ 1.17
TRA2A-202ENST00000392502 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
TRA2A-202ENST00000392502 WASHC2CQ9Y4E1 1318 aa22.29■■□□□ 1.16
TRA2A-202ENST00000392502 MYOM3Q5VTT5 1437 aa22.29■■□□□ 1.16
TRA2A-202ENST00000392502 ARID3CA6NKF2 412 aa22.28■■□□□ 1.16
TRA2A-202ENST00000392502 RTN4Q9NQC3 1192 aaKnown RBP22.28■■□□□ 1.16
TRA2A-202ENST00000392502 PPP4R2Q9NY27 417 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms