RNA–Protein interactions for RNA: ENST00000391875.6

NVL-203, Transcript of nuclear VCP-like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NVL, Length 2,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-203ENST00000391875 RRBP1Q9P2E9 1410 aaKnown RBP13.16□□□□□ -0.3
NVL-203ENST00000391875 CLSPNQ9HAW4 1339 aa13.15□□□□□ -0.3
NVL-203ENST00000391875 CARMIL1Q5VZK9 1371 aa13.15□□□□□ -0.3
NVL-203ENST00000391875 ABCA10Q8WWZ4 1543 aa13.15□□□□□ -0.3
NVL-203ENST00000391875 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
NVL-203ENST00000391875 CUL7Q14999 1698 aa13.12□□□□□ -0.31
NVL-203ENST00000391875 FAM50AQ14320 339 aaKnown RBP13.1□□□□□ -0.31
NVL-203ENST00000391875 WDR62O43379 1518 aa13.1□□□□□ -0.31
NVL-203ENST00000391875 MRC2Q9UBG0 1479 aa13.1□□□□□ -0.31
NVL-203ENST00000391875 NESP48681 1621 aa13.1□□□□□ -0.31
NVL-203ENST00000391875 URB2Q14146 1524 aaKnown RBP13.09□□□□□ -0.31
NVL-203ENST00000391875 ABCA5Q8WWZ7 1642 aa13.07□□□□□ -0.32
NVL-203ENST00000391875 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
NVL-203ENST00000391875 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
NVL-203ENST00000391875 TARBP1Q13395 1621 aaKnown RBP13.05□□□□□ -0.32
NVL-203ENST00000391875 TIAM1Q13009 1591 aa13.04□□□□□ -0.32
NVL-203ENST00000391875 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
NVL-203ENST00000391875 PHLDB1Q86UU1 1377 aa13.03□□□□□ -0.32
NVL-203ENST00000391875 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.32
NVL-203ENST00000391875 THOC2Q8NI27 1593 aaKnown RBP13.02□□□□□ -0.32
NVL-203ENST00000391875 FHAD1B1AJZ9 1412 aa13.01□□□□□ -0.33
NVL-203ENST00000391875 FHOD3Q2V2M9 1422 aa13.01□□□□□ -0.33
NVL-203ENST00000391875 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
NVL-203ENST00000391875 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
NVL-203ENST00000391875 SIN3AQ96ST3 1273 aa12.98□□□□□ -0.33
NVL-203ENST00000391875 PCF11O94913 1555 aaKnown RBP12.97□□□□□ -0.33
NVL-203ENST00000391875 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
NVL-203ENST00000391875 MAP3K1Q13233 1512 aa12.97□□□□□ -0.33
NVL-203ENST00000391875 MAPKBP1O60336 1514 aa12.95□□□□□ -0.34
NVL-203ENST00000391875 CTTNBP2Q8WZ74 1663 aa12.94□□□□□ -0.34
NVL-203ENST00000391875 ERCC6Q03468 1493 aa12.92□□□□□ -0.34
NVL-203ENST00000391875 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
NVL-203ENST00000391875 GAPVD1Q14C86 1478 aa12.89□□□□□ -0.35
NVL-203ENST00000391875 EFCAB5A4FU69 1503 aa12.89□□□□□ -0.35
NVL-203ENST00000391875 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
NVL-203ENST00000391875 CFAP43Q8NDM7 1665 aa12.89□□□□□ -0.35
NVL-203ENST00000391875 KCNH8Q96L42 1107 aa12.89□□□□□ -0.35
NVL-203ENST00000391875 FYCO1Q9BQS8 1478 aa12.89□□□□□ -0.35
NVL-203ENST00000391875 HIRIP3Q9BW71 556 aaPredicted RBP12.89□□□□□ -0.35
NVL-203ENST00000391875 CASKIN1Q8WXD9 1431 aa12.89□□□□□ -0.35
NVL-203ENST00000391875 MTUS2Q5JR59 1369 aa12.88□□□□□ -0.35
NVL-203ENST00000391875 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
NVL-203ENST00000391875 FMN1Q68DA7 1419 aa12.85□□□□□ -0.35
NVL-203ENST00000391875 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
NVL-203ENST00000391875 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
NVL-203ENST00000391875 SUPT16HQ9Y5B9 1047 aaKnown RBP12.83□□□□□ -0.36
NVL-203ENST00000391875 FGD6Q6ZV73 1430 aa12.83□□□□□ -0.36
NVL-203ENST00000391875 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.363e-7■■■■■ 28.9
NVL-203ENST00000391875 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
NVL-203ENST00000391875 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
NVL-203ENST00000391875 TONSLQ96HA7 1378 aa12.8□□□□□ -0.36
NVL-203ENST00000391875 PPP1R15AO75807 674 aaPredicted RBP12.8□□□□□ -0.36
NVL-203ENST00000391875 SAMD9Q5K651 1589 aa12.79□□□□□ -0.36
NVL-203ENST00000391875 ARID3CA6NKF2 412 aa12.79□□□□□ -0.36
NVL-203ENST00000391875 SNAPC4Q5SXM2 1469 aa12.79□□□□□ -0.36
NVL-203ENST00000391875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.78□□□□□ -0.36
NVL-203ENST00000391875 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
NVL-203ENST00000391875 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.36
NVL-203ENST00000391875 CHIC2Q9UKJ5 165 aa12.77□□□□□ -0.37
NVL-203ENST00000391875 PTPRKQ15262 1439 aa12.76□□□□□ -0.37
NVL-203ENST00000391875 NCOA2Q15596 1464 aa12.76□□□□□ -0.37
NVL-203ENST00000391875 RRP7BPQ9NSQ0 103 aa12.75□□□□□ -0.37
NVL-203ENST00000391875 MYOM3Q5VTT5 1437 aa12.74□□□□□ -0.37
NVL-203ENST00000391875 ANP32CO43423 234 aa12.74□□□□□ -0.37
NVL-203ENST00000391875 BCANQ96GW7 911 aa12.74□□□□□ -0.37
NVL-203ENST00000391875 HFM1A2PYH4 1435 aa12.73□□□□□ -0.37
NVL-203ENST00000391875 TRIM52Q96A61 297 aa12.73□□□□□ -0.37
NVL-203ENST00000391875 UACAQ9BZF9 1416 aa12.71□□□□□ -0.37
NVL-203ENST00000391875 UGGT2Q9NYU1 1516 aa12.71□□□□□ -0.37
NVL-203ENST00000391875 NAIPQ13075 1403 aa12.7□□□□□ -0.38
NVL-203ENST00000391875 IQGAP2Q13576 1575 aa12.7□□□□□ -0.38
NVL-203ENST00000391875 PTPN23Q9H3S7 1636 aa12.7□□□□□ -0.38
NVL-203ENST00000391875 SYNJ2O15056 1496 aa12.69□□□□□ -0.38
NVL-203ENST00000391875 EHBP1L1Q8N3D4 1523 aa12.68□□□□□ -0.38
NVL-203ENST00000391875 FKBP8Q14318 412 aa12.68□□□□□ -0.38
NVL-203ENST00000391875 SUPT6HQ7KZ85 1726 aaKnown RBP12.68□□□□□ -0.38
NVL-203ENST00000391875 LRRIQ1Q96JM4 1722 aa12.68□□□□□ -0.38
NVL-203ENST00000391875 KIAA0586Q9BVV6 1533 aa12.67□□□□□ -0.38
NVL-203ENST00000391875 GRIN2AQ12879 1464 aa12.66□□□□□ -0.38
NVL-203ENST00000391875 MAGI3Q5TCQ9 1506 aa12.66□□□□□ -0.38
NVL-203ENST00000391875 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
NVL-203ENST00000391875 CCER2I3L3R5 266 aa12.64□□□□□ -0.39
NVL-203ENST00000391875 NEFLP07196 543 aa12.63□□□□□ -0.39
NVL-203ENST00000391875 NUP160Q12769 1436 aa12.63□□□□□ -0.39
NVL-203ENST00000391875 CDK13Q14004 1512 aaKnown RBP12.63□□□□□ -0.39
NVL-203ENST00000391875 FOXD1Q16676 465 aa12.63□□□□□ -0.39
NVL-203ENST00000391875 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
NVL-203ENST00000391875 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
NVL-203ENST00000391875 HECW1Q76N89 1606 aa12.6□□□□□ -0.39
NVL-203ENST00000391875 HSPA5P11021 654 aaKnown RBP12.59□□□□□ -0.39
NVL-203ENST00000391875 MPHOSPH9Q99550 1183 aa12.59□□□□□ -0.39
NVL-203ENST00000391875 ARHGEF11O15085 1522 aa12.58□□□□□ -0.4
NVL-203ENST00000391875 MYT1Q01538 1121 aa12.58□□□□□ -0.4
NVL-203ENST00000391875 KIAA0556O60303 1618 aa12.58□□□□□ -0.4
NVL-203ENST00000391875 TCOF1Q13428 1488 aaKnown RBP12.57□□□□□ -0.4
NVL-203ENST00000391875 CEP170Q5SW79 1584 aa12.56□□□□□ -0.4
NVL-203ENST00000391875 SHROOM2Q13796 1616 aa12.56□□□□□ -0.4
NVL-203ENST00000391875 EIF4G2P78344 907 aaKnown RBP eCLIP12.56□□□□□ -0.4
NVL-203ENST00000391875 HNRNPUQ00839 825 aaKnown RBP eCLIP12.56□□□□□ -0.4
NVL-203ENST00000391875 L3MBTL2Q969R5 705 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms