RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
LRCH1-202ENST00000389797 RANGAP1P46060 587 aaPredicted RBP22.67■■□□□ 1.22
LRCH1-202ENST00000389797 CLSPNQ9HAW4 1339 aa22.65■■□□□ 1.22
LRCH1-202ENST00000389797 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
LRCH1-202ENST00000389797 ARHGAP35Q9NRY4 1499 aa22.62■■□□□ 1.21
LRCH1-202ENST00000389797 TARBP1Q13395 1621 aaKnown RBP22.59■■□□□ 1.21
LRCH1-202ENST00000389797 CUL7Q14999 1698 aa22.59■■□□□ 1.21
LRCH1-202ENST00000389797 MRC2Q9UBG0 1479 aa22.53■■□□□ 1.2
LRCH1-202ENST00000389797 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
LRCH1-202ENST00000389797 TDRD9Q8NDG6 1382 aaKnown RBP22.53■■□□□ 1.2
LRCH1-202ENST00000389797 GAPVD1Q14C86 1478 aa22.5■■□□□ 1.19
LRCH1-202ENST00000389797 CTTNBP2Q8WZ74 1663 aa22.45■■□□□ 1.18
LRCH1-202ENST00000389797 WDR62O43379 1518 aa22.44■■□□□ 1.18
LRCH1-202ENST00000389797 KANK4Q5T7N3 995 aaPredicted RBP22.43■■□□□ 1.18
LRCH1-202ENST00000389797 PBRM1Q86U86 1689 aa22.4■■□□□ 1.18
LRCH1-202ENST00000389797 RRBP1Q9P2E9 1410 aaKnown RBP22.38■■□□□ 1.17
LRCH1-202ENST00000389797 ERICH6Q7L0X2 663 aa22.36■■□□□ 1.17
LRCH1-202ENST00000389797 AQRO60306 1485 aaKnown RBP eCLIP22.33■■□□□ 1.173e-6■■■■□ 24.7
LRCH1-202ENST00000389797 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.16
LRCH1-202ENST00000389797 EFCAB5A4FU69 1503 aa22.32■■□□□ 1.16
LRCH1-202ENST00000389797 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
LRCH1-202ENST00000389797 IFT140Q96RY7 1462 aa22.3■■□□□ 1.16
LRCH1-202ENST00000389797 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
LRCH1-202ENST00000389797 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
LRCH1-202ENST00000389797 PCF11O94913 1555 aaKnown RBP22.28■■□□□ 1.16
LRCH1-202ENST00000389797 SLC24A1O60721 1099 aa22.28■■□□□ 1.16
LRCH1-202ENST00000389797 TIAM1Q13009 1591 aa22.27■■□□□ 1.16
LRCH1-202ENST00000389797 MAP3K1Q13233 1512 aa22.27■■□□□ 1.16
LRCH1-202ENST00000389797 FHOD3Q2V2M9 1422 aa22.27■■□□□ 1.16
LRCH1-202ENST00000389797 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
LRCH1-202ENST00000389797 SAMD9Q5K651 1589 aa22.26■■□□□ 1.15
LRCH1-202ENST00000389797 SUPT16HQ9Y5B9 1047 aaKnown RBP22.26■■□□□ 1.15
LRCH1-202ENST00000389797 BCL11AQ9H165 835 aa22.24■■□□□ 1.15
LRCH1-202ENST00000389797 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
LRCH1-202ENST00000389797 GRIN2BQ13224 1484 aa22.23■■□□□ 1.15
LRCH1-202ENST00000389797 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
LRCH1-202ENST00000389797 CFAP43Q8NDM7 1665 aa22.22■■□□□ 1.15
LRCH1-202ENST00000389797 ITGAEP38570 1179 aa22.21■■□□□ 1.15
LRCH1-202ENST00000389797 EIF4G3O43432 1585 aaKnown RBP22.19■■□□□ 1.14
LRCH1-202ENST00000389797 FYCO1Q9BQS8 1478 aa22.16■■□□□ 1.14
LRCH1-202ENST00000389797 CASKIN1Q8WXD9 1431 aa22.15■■□□□ 1.14
LRCH1-202ENST00000389797 LRRC9Q6ZRR7 1453 aa22.15■■□□□ 1.14
LRCH1-202ENST00000389797 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
LRCH1-202ENST00000389797 RAB3GAP2Q9H2M9 1393 aa22.13■■□□□ 1.13
LRCH1-202ENST00000389797 LRRIQ1Q96JM4 1722 aa22.1■■□□□ 1.13
LRCH1-202ENST00000389797 IQGAP2Q13576 1575 aa22.1■■□□□ 1.13
LRCH1-202ENST00000389797 FMN1Q68DA7 1419 aa22.1■■□□□ 1.13
LRCH1-202ENST00000389797 MAPKBP1O60336 1514 aa22.05■■□□□ 1.12
LRCH1-202ENST00000389797 SETD5Q9C0A6 1442 aa22.05■■□□□ 1.12
LRCH1-202ENST00000389797 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
LRCH1-202ENST00000389797 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
LRCH1-202ENST00000389797 UGGT2Q9NYU1 1516 aa22■■□□□ 1.11
LRCH1-202ENST00000389797 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
LRCH1-202ENST00000389797 KCNH8Q96L42 1107 aa21.98■■□□□ 1.11
LRCH1-202ENST00000389797 TSHZ2Q9NRE2 1034 aa21.98■■□□□ 1.11
LRCH1-202ENST00000389797 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
LRCH1-202ENST00000389797 KIAA0586Q9BVV6 1533 aa21.96■■□□□ 1.11
LRCH1-202ENST00000389797 FAM50AQ14320 339 aaKnown RBP21.95■■□□□ 1.1
LRCH1-202ENST00000389797 DDX10Q13206 875 aaKnown RBP21.93■■□□□ 1.1
LRCH1-202ENST00000389797 TIMELESSQ9UNS1 1208 aa21.93■■□□□ 1.1
LRCH1-202ENST00000389797 SYNJ2O15056 1496 aa21.93■■□□□ 1.1
LRCH1-202ENST00000389797 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
LRCH1-202ENST00000389797 SIN3AQ96ST3 1273 aa21.92■■□□□ 1.1
LRCH1-202ENST00000389797 DISP1Q96F81 1524 aa21.91■■□□□ 1.1
LRCH1-202ENST00000389797 KIAA0556O60303 1618 aa21.9■■□□□ 1.1
LRCH1-202ENST00000389797 MAGI3Q5TCQ9 1506 aa21.87■■□□□ 1.09
LRCH1-202ENST00000389797 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
LRCH1-202ENST00000389797 PPP1R15AO75807 674 aaPredicted RBP21.84■■□□□ 1.09
LRCH1-202ENST00000389797 NUP160Q12769 1436 aa21.83■■□□□ 1.09
LRCH1-202ENST00000389797 CCDC18Q5T9S5 1454 aa21.82■■□□□ 1.08
LRCH1-202ENST00000389797 FKBP8Q14318 412 aa21.82■■□□□ 1.08
LRCH1-202ENST00000389797 EHBP1L1Q8N3D4 1523 aa21.82■■□□□ 1.08
LRCH1-202ENST00000389797 MTUS2Q5JR59 1369 aa21.81■■□□□ 1.08
LRCH1-202ENST00000389797 EPRSP07814 1512 aaKnown RBP21.8■■□□□ 1.08
LRCH1-202ENST00000389797 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
LRCH1-202ENST00000389797 BCANQ96GW7 911 aa21.8■■□□□ 1.08
LRCH1-202ENST00000389797 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
LRCH1-202ENST00000389797 SUPT6HQ7KZ85 1726 aaKnown RBP21.79■■□□□ 1.08
LRCH1-202ENST00000389797 NCOA2Q15596 1464 aa21.79■■□□□ 1.08
LRCH1-202ENST00000389797 CCER2I3L3R5 266 aa21.78■■□□□ 1.08
LRCH1-202ENST00000389797 FGD6Q6ZV73 1430 aa21.78■■□□□ 1.08
LRCH1-202ENST00000389797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.78■■□□□ 1.081e-9■■■■■ 51.3
LRCH1-202ENST00000389797 CDK13Q14004 1512 aaKnown RBP21.77■■□□□ 1.08
LRCH1-202ENST00000389797 NEFLP07196 543 aa21.77■■□□□ 1.08
LRCH1-202ENST00000389797 ANP32CO43423 234 aa21.77■■□□□ 1.08
LRCH1-202ENST00000389797 ANP32EQ9BTT0 268 aa21.76■■□□□ 1.07
LRCH1-202ENST00000389797 FBLN2P98095 1184 aa21.72■■□□□ 1.07
LRCH1-202ENST00000389797 HIRIP3Q9BW71 556 aaPredicted RBP21.72■■□□□ 1.07
LRCH1-202ENST00000389797 RAPGEF6Q8TEU7 1601 aa21.72■■□□□ 1.07
LRCH1-202ENST00000389797 MYOM3Q5VTT5 1437 aa21.71■■□□□ 1.07
LRCH1-202ENST00000389797 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
LRCH1-202ENST00000389797 TONSLQ96HA7 1378 aa21.68■■□□□ 1.06
LRCH1-202ENST00000389797 TRIM52Q96A61 297 aa21.67■■□□□ 1.06
LRCH1-202ENST00000389797 CHD1O14646 1710 aa21.65■■□□□ 1.06
LRCH1-202ENST00000389797 JPH4Q96JJ6 628 aa21.65■■□□□ 1.06
LRCH1-202ENST00000389797 PTPRKQ15262 1439 aa21.65■■□□□ 1.06
LRCH1-202ENST00000389797 PTPN23Q9H3S7 1636 aa21.64■■□□□ 1.06
LRCH1-202ENST00000389797 PLB1Q6P1J6 1458 aa21.62■■□□□ 1.05
LRCH1-202ENST00000389797 ARID3CA6NKF2 412 aa21.62■■□□□ 1.05
LRCH1-202ENST00000389797 TCOF1Q13428 1488 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms