RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 CEP164Q9UPV0 1460 aa14.85□□□□□ -0.03
LAMA4-205ENST00000389463 WDR43Q15061 677 aaKnown RBP eCLIP14.85□□□□□ -0.03
LAMA4-205ENST00000389463 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
LAMA4-205ENST00000389463 HAP1P54257 671 aaPredicted RBP14.84□□□□□ -0.03
LAMA4-205ENST00000389463 PDS5BQ9NTI5 1447 aa14.84□□□□□ -0.03
LAMA4-205ENST00000389463 DDX10Q13206 875 aaKnown RBP14.84□□□□□ -0.03
LAMA4-205ENST00000389463 TMC1Q8TDI8 760 aa14.83□□□□□ -0.03
LAMA4-205ENST00000389463 CEP162Q5TB80 1403 aa14.83□□□□□ -0.03
LAMA4-205ENST00000389463 FAM9BQ8IZU0 186 aa14.82□□□□□ -0.04
LAMA4-205ENST00000389463 RGL3Q3MIN7 710 aa14.82□□□□□ -0.04
LAMA4-205ENST00000389463 NPM2Q86SE8 214 aaKnown RBP14.81□□□□□ -0.04
LAMA4-205ENST00000389463 CUX2O14529 1486 aa14.81□□□□□ -0.04
LAMA4-205ENST00000389463 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
LAMA4-205ENST00000389463 EIF5BO60841 1220 aaKnown RBP14.8□□□□□ -0.04
LAMA4-205ENST00000389463 SALL2Q9Y467 1007 aaPredicted RBP14.8□□□□□ -0.04
LAMA4-205ENST00000389463 CARMIL1Q5VZK9 1371 aa14.78□□□□□ -0.04
LAMA4-205ENST00000389463 HNRNPUQ00839 825 aaKnown RBP eCLIP14.77□□□□□ -0.05
LAMA4-205ENST00000389463 EIF4G2P78344 907 aaKnown RBP eCLIP14.76□□□□□ -0.05
LAMA4-205ENST00000389463 CCNB3Q8WWL7 1395 aa14.75□□□□□ -0.05
LAMA4-205ENST00000389463 TNIKQ9UKE5 1360 aa14.75□□□□□ -0.05
LAMA4-205ENST00000389463 GTF3C3Q9Y5Q9 886 aa14.75□□□□□ -0.05
LAMA4-205ENST00000389463 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.73□□□□□ -0.05
LAMA4-205ENST00000389463 MLECQ14165 292 aa14.72□□□□□ -0.05
LAMA4-205ENST00000389463 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
LAMA4-205ENST00000389463 CARMIL2Q6F5E8 1435 aa14.71□□□□□ -0.05
LAMA4-205ENST00000389463 CDCA8Q53HL2 280 aa14.71□□□□□ -0.05
LAMA4-205ENST00000389463 KANK1Q14678 1352 aa14.7□□□□□ -0.06
LAMA4-205ENST00000389463 MRS2Q9HD23 443 aa14.7□□□□□ -0.06
LAMA4-205ENST00000389463 POGKQ9P215 609 aa14.7□□□□□ -0.06
LAMA4-205ENST00000389463 SOGA1O94964 1423 aa14.69□□□□□ -0.06
LAMA4-205ENST00000389463 HDGFP51858 240 aaKnown RBP14.68□□□□□ -0.06
LAMA4-205ENST00000389463 LMOD2Q6P5Q4 547 aa14.67□□□□□ -0.06
LAMA4-205ENST00000389463 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
LAMA4-205ENST00000389463 CFAP53Q96M91 514 aa14.66□□□□□ -0.06
LAMA4-205ENST00000389463 MROH2BQ7Z745 1585 aa14.66□□□□□ -0.06
LAMA4-205ENST00000389463 HIRIP3Q9BW71 556 aaPredicted RBP14.65□□□□□ -0.06
LAMA4-205ENST00000389463 ANP32AP39687 249 aaKnown RBP14.65□□□□□ -0.06
LAMA4-205ENST00000389463 UPF2Q9HAU5 1272 aaKnown RBP14.65□□□□□ -0.06
LAMA4-205ENST00000389463 CARD11Q9BXL7 1154 aa14.64□□□□□ -0.07
LAMA4-205ENST00000389463 HSP90AA1P07900 732 aaKnown RBP14.63□□□□□ -0.07
LAMA4-205ENST00000389463 TDRD9Q8NDG6 1382 aaKnown RBP14.63□□□□□ -0.07
LAMA4-205ENST00000389463 KNSTRNQ9Y448 316 aa14.62□□□□□ -0.07
LAMA4-205ENST00000389463 PPM1GO15355 546 aaPredicted RBP14.62□□□□□ -0.07
LAMA4-205ENST00000389463 MYH16Q9H6N6 1097 aa14.62□□□□□ -0.07
LAMA4-205ENST00000389463 FKBP8Q14318 412 aa14.59□□□□□ -0.07
LAMA4-205ENST00000389463 CADPSQ9ULU8 1353 aa14.58□□□□□ -0.07
LAMA4-205ENST00000389463 GGT6Q6P531 493 aa14.58□□□□□ -0.08
LAMA4-205ENST00000389463 ARXQ96QS3 562 aa14.58□□□□□ -0.08
LAMA4-205ENST00000389463 EFCAB2Q5VUJ9 269 aa14.54□□□□□ -0.08
LAMA4-205ENST00000389463 MYO15BQ96JP2 1530 aa14.53□□□□□ -0.08
LAMA4-205ENST00000389463 CCDC136Q96JN2 1154 aa14.53□□□□□ -0.08
LAMA4-205ENST00000389463 NUDCQ9Y266 331 aa14.53□□□□□ -0.08
LAMA4-205ENST00000389463 TOP2AP11388 1531 aaKnown RBP14.52□□□□□ -0.08
LAMA4-205ENST00000389463 ABCC8Q09428 1581 aa14.52□□□□□ -0.09
LAMA4-205ENST00000389463 MAPK8IP3Q9UPT6 1336 aa14.51□□□□□ -0.09
LAMA4-205ENST00000389463 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
LAMA4-205ENST00000389463 DCAF11Q8TEB1 546 aa14.49□□□□□ -0.09
LAMA4-205ENST00000389463 FMN1Q68DA7 1419 aa14.48□□□□□ -0.09
LAMA4-205ENST00000389463 WIZO95785 1651 aa14.47□□□□□ -0.09
LAMA4-205ENST00000389463 ATAD2BQ9ULI0 1458 aa14.47□□□□□ -0.09
LAMA4-205ENST00000389463 NPHP1O15259 732 aa14.46□□□□□ -0.09
LAMA4-205ENST00000389463 SRPK2P78362 688 aaKnown RBP14.46□□□□□ -0.09
LAMA4-205ENST00000389463 GLIPR1L2Q4G1C9 344 aa14.46□□□□□ -0.09
LAMA4-205ENST00000389463 TMF1P82094 1093 aa14.45□□□□□ -0.1
LAMA4-205ENST00000389463 SIN3AQ96ST3 1273 aa14.45□□□□□ -0.1
LAMA4-205ENST00000389463 LAS1LQ9Y4W2 734 aaKnown RBP14.45□□□□□ -0.1
LAMA4-205ENST00000389463 TNNT2P45379 298 aaPredicted RBP14.45□□□□□ -0.1
LAMA4-205ENST00000389463 ANP32BQ92688 251 aaKnown RBP14.43□□□□□ -0.1
LAMA4-205ENST00000389463 JPH4Q96JJ6 628 aa14.43□□□□□ -0.1
LAMA4-205ENST00000389463 SAFB2Q14151 953 aaKnown RBP eCLIP14.42□□□□□ -0.1
LAMA4-205ENST00000389463 NEUROD2Q15784 382 aa14.42□□□□□ -0.1
LAMA4-205ENST00000389463 PNNQ9H307 717 aaKnown RBP14.42□□□□□ -0.1
LAMA4-205ENST00000389463 STK26Q9P289 416 aa14.41□□□□□ -0.1
LAMA4-205ENST00000389463 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
LAMA4-205ENST00000389463 U2SURPO15042 1029 aaKnown RBP14.41□□□□□ -0.1
LAMA4-205ENST00000389463 RAPGEF2Q9Y4G8 1499 aa14.4□□□□□ -0.1
LAMA4-205ENST00000389463 PKD2Q13563 968 aa14.4□□□□□ -0.1
LAMA4-205ENST00000389463 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
LAMA4-205ENST00000389463 SOX12O15370 315 aa14.4□□□□□ -0.1
LAMA4-205ENST00000389463 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
LAMA4-205ENST00000389463 CC2D1BQ5T0F9 858 aaKnown RBP14.39□□□□□ -0.11
LAMA4-205ENST00000389463 VPS8Q8N3P4 1428 aa14.39□□□□□ -0.11
LAMA4-205ENST00000389463 ANKRD30AQ9BXX3 1397 aa14.39□□□□□ -0.11
LAMA4-205ENST00000389463 KIF3BO15066 747 aa14.39□□□□□ -0.11
LAMA4-205ENST00000389463 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
LAMA4-205ENST00000389463 MIER1Q8N108 512 aa14.38□□□□□ -0.11
LAMA4-205ENST00000389463 CYB5RLQ6IPT4 315 aa14.37□□□□□ -0.11
LAMA4-205ENST00000389463 EID1Q9Y6B2 187 aa14.37□□□□□ -0.11
LAMA4-205ENST00000389463 SPAG9O60271 1321 aaKnown RBP14.37□□□□□ -0.11
LAMA4-205ENST00000389463 HDGFL2Q7Z4V5 671 aaPredicted RBP14.36□□□□□ -0.11
LAMA4-205ENST00000389463 SETD5Q9C0A6 1442 aa14.35□□□□□ -0.11
LAMA4-205ENST00000389463 HNRNPMP52272 730 aaKnown RBP eCLIP14.35□□□□□ -0.11
LAMA4-205ENST00000389463 NUP155O75694 1391 aa14.35□□□□□ -0.11
LAMA4-205ENST00000389463 RSPH4AQ5TD94 716 aa14.35□□□□□ -0.11
LAMA4-205ENST00000389463 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
LAMA4-205ENST00000389463 IRX6P78412 446 aaPredicted RBP14.34□□□□□ -0.11
LAMA4-205ENST00000389463 WASHC2CQ9Y4E1 1318 aa14.34□□□□□ -0.11
LAMA4-205ENST00000389463 MORC1Q86VD1 984 aa14.33□□□□□ -0.11
LAMA4-205ENST00000389463 CCDC18Q5T9S5 1454 aa14.33□□□□□ -0.12
LAMA4-205ENST00000389463 SENP3-EIF4A1A0A087X0R7 540 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms