RNA–Protein interactions for RNA: ENST00000388901.9

COPS2-202, Transcript of COP9 signalosome subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS2, Length 6,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-202ENST00000388901 TOP2AP11388 1531 aaKnown RBP5.77□□□□□ -1.49
COPS2-202ENST00000388901 KANK1Q14678 1352 aa5.77□□□□□ -1.49
COPS2-202ENST00000388901 CARMIL1Q5VZK9 1371 aa5.77□□□□□ -1.49
COPS2-202ENST00000388901 ARID4BQ4LE39 1312 aaPredicted RBP5.76□□□□□ -1.49
COPS2-202ENST00000388901 CFAP53Q96M91 514 aa5.76□□□□□ -1.49
COPS2-202ENST00000388901 CFDP1Q9UEE9 299 aaPredicted RBP5.76□□□□□ -1.49
COPS2-202ENST00000388901 WDR43Q15061 677 aaKnown RBP eCLIP5.76□□□□□ -1.49
COPS2-202ENST00000388901 ANP32EQ9BTT0 268 aa5.75□□□□□ -1.49
COPS2-202ENST00000388901 PNNQ9H307 717 aaKnown RBP5.75□□□□□ -1.49
COPS2-202ENST00000388901 CCNB3Q8WWL7 1395 aa5.75□□□□□ -1.49
COPS2-202ENST00000388901 MS4A1P11836 297 aa5.75□□□□□ -1.49
COPS2-202ENST00000388901 HAP1P54257 671 aaPredicted RBP5.74□□□□□ -1.49
COPS2-202ENST00000388901 ANP32BQ92688 251 aaKnown RBP5.74□□□□□ -1.49
COPS2-202ENST00000388901 CHMP4AQ9BY43 222 aa5.74□□□□□ -1.49
COPS2-202ENST00000388901 TMC1Q8TDI8 760 aa5.74□□□□□ -1.49
COPS2-202ENST00000388901 CADPSQ9ULU8 1353 aa5.74□□□□□ -1.49
COPS2-202ENST00000388901 VPS8Q8N3P4 1428 aa5.73□□□□□ -1.49
COPS2-202ENST00000388901 CFAP44Q96MT7 982 aa5.73□□□□□ -1.49
COPS2-202ENST00000388901 ARID3CA6NKF2 412 aa5.73□□□□□ -1.49
COPS2-202ENST00000388901 CUX2O14529 1486 aa5.73□□□□□ -1.49
COPS2-202ENST00000388901 MYH16Q9H6N6 1097 aa5.72□□□□□ -1.49
COPS2-202ENST00000388901 CHGAP10645 457 aaKnown RBP5.72□□□□□ -1.49
COPS2-202ENST00000388901 PPP1R15AO75807 674 aaPredicted RBP5.71□□□□□ -1.5
COPS2-202ENST00000388901 NUDCQ9Y266 331 aa5.7□□□□□ -1.5
COPS2-202ENST00000388901 CCDC88BA6NC98 1476 aa5.7□□□□□ -1.5
COPS2-202ENST00000388901 ARHGAP35Q9NRY4 1499 aa5.7□□□□□ -1.5
COPS2-202ENST00000388901 ERICH6BQ5W0A0 696 aa5.7□□□□□ -1.5
COPS2-202ENST00000388901 STAC3Q96MF2 364 aa5.7□□□□□ -1.5
COPS2-202ENST00000388901 PLPPR3Q6T4P5 718 aa5.69□□□□□ -1.5
COPS2-202ENST00000388901 GTF3C3Q9Y5Q9 886 aa5.69□□□□□ -1.5
COPS2-202ENST00000388901 CECR2Q9BXF3 1484 aa5.69□□□□□ -1.5
COPS2-202ENST00000388901 DDRGK1Q96HY6 314 aa5.69□□□□□ -1.5
COPS2-202ENST00000388901 SOGA1O94964 1423 aa5.69□□□□□ -1.5
COPS2-202ENST00000388901 RAPGEF2Q9Y4G8 1499 aa5.69□□□□□ -1.5
COPS2-202ENST00000388901 NPM2Q86SE8 214 aaKnown RBP5.68□□□□□ -1.5
COPS2-202ENST00000388901 MRS2Q9HD23 443 aa5.68□□□□□ -1.5
COPS2-202ENST00000388901 HNRNPUQ00839 825 aaKnown RBP eCLIP5.68□□□□□ -1.5
COPS2-202ENST00000388901 ATAD2BQ9ULI0 1458 aa5.68□□□□□ -1.5
COPS2-202ENST00000388901 KNSTRNQ9Y448 316 aa5.68□□□□□ -1.5
COPS2-202ENST00000388901 ANKRD30AQ9BXX3 1397 aa5.67□□□□□ -1.5
COPS2-202ENST00000388901 MROH2BQ7Z745 1585 aa5.67□□□□□ -1.5
COPS2-202ENST00000388901 EFCAB2Q5VUJ9 269 aa5.67□□□□□ -1.5
COPS2-202ENST00000388901 CHIC2Q9UKJ5 165 aa5.67□□□□□ -1.5
COPS2-202ENST00000388901 CCER2I3L3R5 266 aa5.67□□□□□ -1.5
COPS2-202ENST00000388901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.67□□□□□ -1.56e-6■□□□□ 8.3
COPS2-202ENST00000388901 SETD5Q9C0A6 1442 aa5.67□□□□□ -1.5
COPS2-202ENST00000388901 CCDC18Q5T9S5 1454 aa5.67□□□□□ -1.5
COPS2-202ENST00000388901 EIF3AQ14152 1382 aaKnown RBP5.66□□□□□ -1.5
COPS2-202ENST00000388901 BECN1Q14457 450 aa5.66□□□□□ -1.5
COPS2-202ENST00000388901 ROCK2O75116 1388 aaKnown RBP5.66□□□□□ -1.5
COPS2-202ENST00000388901 NCAPD3P42695 1498 aa5.65□□□□□ -1.5
COPS2-202ENST00000388901 HSP90AA1P07900 732 aaKnown RBP5.65□□□□□ -1.5
COPS2-202ENST00000388901 TMF1P82094 1093 aa5.65□□□□□ -1.5
COPS2-202ENST00000388901 CCDC136Q96JN2 1154 aa5.65□□□□□ -1.5
COPS2-202ENST00000388901 DDX10Q13206 875 aaKnown RBP5.65□□□□□ -1.51
COPS2-202ENST00000388901 CALD1Q05682 793 aaKnown RBP5.65□□□□□ -1.51
COPS2-202ENST00000388901 CARD11Q9BXL7 1154 aa5.64□□□□□ -1.51
COPS2-202ENST00000388901 CASC1Q6TDU7 716 aa5.64□□□□□ -1.51
COPS2-202ENST00000388901 SMARCA4P51532 1647 aa5.64□□□□□ -1.51
COPS2-202ENST00000388901 UACAQ9BZF9 1416 aa5.64□□□□□ -1.51
COPS2-202ENST00000388901 HDAC5Q9UQL6 1122 aa5.64□□□□□ -1.51
COPS2-202ENST00000388901 RRP7BPQ9NSQ0 103 aa5.64□□□□□ -1.51
COPS2-202ENST00000388901 MAPK8IP3Q9UPT6 1336 aa5.63□□□□□ -1.51
COPS2-202ENST00000388901 NGEFQ8N5V2 710 aa5.63□□□□□ -1.51
COPS2-202ENST00000388901 GOLGA6L22H0YM25 854 aa5.63□□□□□ -1.51
COPS2-202ENST00000388901 PHLDB1Q86UU1 1377 aa5.62□□□□□ -1.51
COPS2-202ENST00000388901 KCNH8Q96L42 1107 aa5.62□□□□□ -1.51
COPS2-202ENST00000388901 RALBP1Q15311 655 aa5.62□□□□□ -1.51
COPS2-202ENST00000388901 FAM9BQ8IZU0 186 aa5.62□□□□□ -1.51
COPS2-202ENST00000388901 EIF4G1Q04637 1599 aaKnown RBP5.61□□□□□ -1.51
COPS2-202ENST00000388901 NCLP19338 710 aaKnown RBP5.61□□□□□ -1.51
COPS2-202ENST00000388901 FKBP8Q14318 412 aa5.61□□□□□ -1.51
COPS2-202ENST00000388901 POGKQ9P215 609 aa5.61□□□□□ -1.51
COPS2-202ENST00000388901 KDM2AQ9Y2K7 1162 aa5.61□□□□□ -1.51
COPS2-202ENST00000388901 PPM1GO15355 546 aaPredicted RBP5.59□□□□□ -1.51
COPS2-202ENST00000388901 PTMSP20962 102 aa5.59□□□□□ -1.51
COPS2-202ENST00000388901 FANCD2Q9BXW9 1451 aa5.59□□□□□ -1.51
COPS2-202ENST00000388901 HDGFL2Q7Z4V5 671 aaPredicted RBP5.59□□□□□ -1.52
COPS2-202ENST00000388901 PDE3BQ13370 1112 aa5.58□□□□□ -1.52
COPS2-202ENST00000388901 KTN1Q86UP2 1357 aaKnown RBP5.58□□□□□ -1.52
COPS2-202ENST00000388901 CUX1P39880 1505 aa5.58□□□□□ -1.52
COPS2-202ENST00000388901 PPP4R2Q9NY27 417 aa5.58□□□□□ -1.52
COPS2-202ENST00000388901 C14orf37Q86TY3 774 aa5.58□□□□□ -1.52
COPS2-202ENST00000388901 IPO8O15397 1037 aaKnown RBP5.57□□□□□ -1.52
COPS2-202ENST00000388901 HMGXB3Q12766 1538 aa5.57□□□□□ -1.52
COPS2-202ENST00000388901 LMOD3Q0VAK6 560 aa5.56□□□□□ -1.52
COPS2-202ENST00000388901 ERICH3Q5RHP9 1530 aa5.56□□□□□ -1.52
COPS2-202ENST00000388901 GLIPR1L2Q4G1C9 344 aa5.56□□□□□ -1.52
COPS2-202ENST00000388901 CDK11BP21127 795 aaKnown RBP5.56□□□□□ -1.52
COPS2-202ENST00000388901 FTSJ3Q8IY81 847 aaKnown RBP5.56□□□□□ -1.52
COPS2-202ENST00000388901 CHMP4CQ96CF2 233 aa5.55□□□□□ -1.52
COPS2-202ENST00000388901 TERF2IPQ9NYB0 399 aa5.55□□□□□ -1.52
COPS2-202ENST00000388901 BCL11AQ9H165 835 aa5.55□□□□□ -1.52
COPS2-202ENST00000388901 PTPRGP23470 1445 aa5.55□□□□□ -1.52
COPS2-202ENST00000388901 MYOM3Q5VTT5 1437 aa5.55□□□□□ -1.52
COPS2-202ENST00000388901 PLEKHH2Q8IVE3 1493 aa5.55□□□□□ -1.52
COPS2-202ENST00000388901 SPAG9O60271 1321 aaKnown RBP5.55□□□□□ -1.52
COPS2-202ENST00000388901 NUP155O75694 1391 aa5.54□□□□□ -1.52
COPS2-202ENST00000388901 TDRD9Q8NDG6 1382 aaKnown RBP5.54□□□□□ -1.52
COPS2-202ENST00000388901 EFCAB5A4FU69 1503 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms