RNA–Protein interactions for RNA: ENST00000382045.3

LINC00487-201, long intergenic non-protein coding RNA 487, humanhuman

TSL 2 BASIC

Gene LINC00487, Length 2,131 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-201ENST00000382045 DHX57Q6P158 1386 aaKnown RBP24.6■■□□□ 1.53
LINC00487-201ENST00000382045 ABCA5Q8WWZ7 1642 aa24.6■■□□□ 1.53
LINC00487-201ENST00000382045 EFCAB5A4FU69 1503 aa24.6■■□□□ 1.53
LINC00487-201ENST00000382045 CLSPNQ9HAW4 1339 aa24.6■■□□□ 1.53
LINC00487-201ENST00000382045 LRRC9Q6ZRR7 1453 aa24.59■■□□□ 1.53
LINC00487-201ENST00000382045 PDS5BQ9NTI5 1447 aa24.58■■□□□ 1.53
LINC00487-201ENST00000382045 KIF21AQ7Z4S6 1674 aa24.58■■□□□ 1.53
LINC00487-201ENST00000382045 FHOD3Q2V2M9 1422 aa24.52■■□□□ 1.52
LINC00487-201ENST00000382045 DNAJC5BQ9UF47 199 aa24.52■■□□□ 1.52
LINC00487-201ENST00000382045 FYCO1Q9BQS8 1478 aa24.51■■□□□ 1.51
LINC00487-201ENST00000382045 AQRO60306 1485 aaKnown RBP eCLIP24.48■■□□□ 1.51
LINC00487-201ENST00000382045 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
LINC00487-201ENST00000382045 P3H3Q8IVL6 736 aa24.48■■□□□ 1.51
LINC00487-201ENST00000382045 TDRD9Q8NDG6 1382 aaKnown RBP24.46■■□□□ 1.51
LINC00487-201ENST00000382045 CASKIN1Q8WXD9 1431 aa24.46■■□□□ 1.51
LINC00487-201ENST00000382045 PHLDB1Q86UU1 1377 aa24.45■■□□□ 1.5
LINC00487-201ENST00000382045 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
LINC00487-201ENST00000382045 SCAF1Q9H7N4 1312 aaKnown RBP24.43■■□□□ 1.5
LINC00487-201ENST00000382045 SAMD9Q5K651 1589 aa24.42■■□□□ 1.5
LINC00487-201ENST00000382045 FMN1Q68DA7 1419 aa24.39■■□□□ 1.49
LINC00487-201ENST00000382045 ITGAEP38570 1179 aa24.38■■□□□ 1.49
LINC00487-201ENST00000382045 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
LINC00487-201ENST00000382045 RAB3GAP2Q9H2M9 1393 aa24.36■■□□□ 1.49
LINC00487-201ENST00000382045 ACIN1Q9UKV3 1341 aaKnown RBP24.34■■□□□ 1.49
LINC00487-201ENST00000382045 ATP1B4Q9UN42 357 aaPredicted RBP24.33■■□□□ 1.49
LINC00487-201ENST00000382045 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
LINC00487-201ENST00000382045 LRRIQ1Q96JM4 1722 aa24.31■■□□□ 1.48
LINC00487-201ENST00000382045 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
LINC00487-201ENST00000382045 SETD5Q9C0A6 1442 aa24.29■■□□□ 1.48
LINC00487-201ENST00000382045 MAPKBP1O60336 1514 aa24.28■■□□□ 1.48
LINC00487-201ENST00000382045 CENPBP07199 599 aaPredicted RBP24.25■■□□□ 1.47
LINC00487-201ENST00000382045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.25■■□□□ 1.47
LINC00487-201ENST00000382045 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
LINC00487-201ENST00000382045 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
LINC00487-201ENST00000382045 FAM50AQ14320 339 aaKnown RBP24.25■■□□□ 1.47
LINC00487-201ENST00000382045 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
LINC00487-201ENST00000382045 ADAMTS12P58397 1594 aa24.21■■□□□ 1.47
LINC00487-201ENST00000382045 MIER1Q8N108 512 aa24.2■■□□□ 1.47
LINC00487-201ENST00000382045 FGD6Q6ZV73 1430 aa24.18■■□□□ 1.46
LINC00487-201ENST00000382045 MTUS2Q5JR59 1369 aa24.16■■□□□ 1.46
LINC00487-201ENST00000382045 IQGAP2Q13576 1575 aa24.15■■□□□ 1.46
LINC00487-201ENST00000382045 SUPT6HQ7KZ85 1726 aaKnown RBP24.12■■□□□ 1.45
LINC00487-201ENST00000382045 EHBP1L1Q8N3D4 1523 aa24.12■■□□□ 1.45
LINC00487-201ENST00000382045 WDR62O43379 1518 aa24.1■■□□□ 1.45
LINC00487-201ENST00000382045 NCOA2Q15596 1464 aa24.1■■□□□ 1.45
LINC00487-201ENST00000382045 IFT140Q96RY7 1462 aa24.08■■□□□ 1.44
LINC00487-201ENST00000382045 CCDC18Q5T9S5 1454 aa24.07■■□□□ 1.44
LINC00487-201ENST00000382045 HECW1Q76N89 1606 aa24.07■■□□□ 1.44
LINC00487-201ENST00000382045 MYOM3Q5VTT5 1437 aa24.06■■□□□ 1.44
LINC00487-201ENST00000382045 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
LINC00487-201ENST00000382045 MAGI3Q5TCQ9 1506 aa24.05■■□□□ 1.44
LINC00487-201ENST00000382045 UGGT2Q9NYU1 1516 aa24.04■■□□□ 1.44
LINC00487-201ENST00000382045 ZNF608Q9ULD9 1512 aaPredicted RBP24.04■■□□□ 1.44
LINC00487-201ENST00000382045 YTHDC1Q96MU7 727 aaKnown RBP24.01■■□□□ 1.43
LINC00487-201ENST00000382045 PTPRKQ15262 1439 aa24■■□□□ 1.43
LINC00487-201ENST00000382045 GTF3C3Q9Y5Q9 886 aa23.99■■□□□ 1.43
LINC00487-201ENST00000382045 HFM1A2PYH4 1435 aa23.99■■□□□ 1.43
LINC00487-201ENST00000382045 PTPN23Q9H3S7 1636 aa23.99■■□□□ 1.43
LINC00487-201ENST00000382045 EPRSP07814 1512 aaKnown RBP23.97■■□□□ 1.43
LINC00487-201ENST00000382045 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
LINC00487-201ENST00000382045 SIN3AQ96ST3 1273 aa23.95■■□□□ 1.42
LINC00487-201ENST00000382045 TIMELESSQ9UNS1 1208 aa23.92■■□□□ 1.42
LINC00487-201ENST00000382045 CDK13Q14004 1512 aaKnown RBP23.91■■□□□ 1.42
LINC00487-201ENST00000382045 NAIPQ13075 1403 aa23.91■■□□□ 1.42
LINC00487-201ENST00000382045 TCOF1Q13428 1488 aaKnown RBP23.9■■□□□ 1.42
LINC00487-201ENST00000382045 KIAA0586Q9BVV6 1533 aa23.9■■□□□ 1.42
LINC00487-201ENST00000382045 KIAA0556O60303 1618 aa23.9■■□□□ 1.42
LINC00487-201ENST00000382045 UACAQ9BZF9 1416 aa23.89■■□□□ 1.42
LINC00487-201ENST00000382045 GRIN2AQ12879 1464 aa23.88■■□□□ 1.41
LINC00487-201ENST00000382045 DISP1Q96F81 1524 aa23.87■■□□□ 1.41
LINC00487-201ENST00000382045 GCC2Q8IWJ2 1684 aa23.85■■□□□ 1.41
LINC00487-201ENST00000382045 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
LINC00487-201ENST00000382045 MIA2Q96PC5 1412 aa23.8■■□□□ 1.4
LINC00487-201ENST00000382045 MAGI1Q96QZ7 1491 aaPredicted RBP23.8■■□□□ 1.4
LINC00487-201ENST00000382045 RAPGEF6Q8TEU7 1601 aa23.78■■□□□ 1.4
LINC00487-201ENST00000382045 AKNAQ7Z591 1439 aa23.78■■□□□ 1.4
LINC00487-201ENST00000382045 PPP1R15AO75807 674 aaPredicted RBP23.77■■□□□ 1.4
LINC00487-201ENST00000382045 NUP153P49790 1475 aaKnown RBP23.76■■□□□ 1.39
LINC00487-201ENST00000382045 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
LINC00487-201ENST00000382045 SYNJ2O15056 1496 aa23.72■■□□□ 1.39
LINC00487-201ENST00000382045 ARID3CA6NKF2 412 aa23.72■■□□□ 1.39
LINC00487-201ENST00000382045 TONSLQ96HA7 1378 aa23.71■■□□□ 1.39
LINC00487-201ENST00000382045 KDM6BO15054 1643 aa23.7■■□□□ 1.38
LINC00487-201ENST00000382045 RRP7BPQ9NSQ0 103 aa23.68■■□□□ 1.38
LINC00487-201ENST00000382045 CHIC2Q9UKJ5 165 aa23.67■■□□□ 1.38
LINC00487-201ENST00000382045 DENND4BO75064 1496 aaPredicted RBP23.66■■□□□ 1.38
LINC00487-201ENST00000382045 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
LINC00487-201ENST00000382045 DNMT1P26358 1616 aaKnown RBP23.65■■□□□ 1.38
LINC00487-201ENST00000382045 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
LINC00487-201ENST00000382045 PELP1Q8IZL8 1130 aaKnown RBP23.63■■□□□ 1.37
LINC00487-201ENST00000382045 NUP160Q12769 1436 aa23.62■■□□□ 1.37
LINC00487-201ENST00000382045 DAPK1P53355 1430 aa23.62■■□□□ 1.37
LINC00487-201ENST00000382045 DDX10Q13206 875 aaKnown RBP23.59■■□□□ 1.37
LINC00487-201ENST00000382045 ROCK1Q13464 1354 aa23.58■■□□□ 1.37
LINC00487-201ENST00000382045 PLB1Q6P1J6 1458 aa23.58■■□□□ 1.37
LINC00487-201ENST00000382045 CDK11AQ9UQ88 783 aaPredicted RBP23.58■■□□□ 1.37
LINC00487-201ENST00000382045 TROQ12816 1431 aaPredicted RBP23.57■■□□□ 1.36
LINC00487-201ENST00000382045 ADCY10Q96PN6 1610 aa23.57■■□□□ 1.36
LINC00487-201ENST00000382045 ABCC5O15440 1437 aa23.56■■□□□ 1.36
LINC00487-201ENST00000382045 ITSN2Q9NZM3 1697 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms