RNA–Protein interactions for RNA: ENST00000381042.8

PNPLA4-201, Transcript of patatin like phospholipase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNPLA4, Length 3,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA4-201ENST00000381042 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
PNPLA4-201ENST00000381042 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
PNPLA4-201ENST00000381042 SIN3AQ96ST3 1273 aa16.34■□□□□ 0.21
PNPLA4-201ENST00000381042 PHLDB1Q86UU1 1377 aa16.34■□□□□ 0.21
PNPLA4-201ENST00000381042 RAB3GAP2Q9H2M9 1393 aa16.34■□□□□ 0.21
PNPLA4-201ENST00000381042 RRBP1Q9P2E9 1410 aaKnown RBP16.33■□□□□ 0.21
PNPLA4-201ENST00000381042 HIRIP3Q9BW71 556 aaPredicted RBP16.3■□□□□ 0.2
PNPLA4-201ENST00000381042 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
PNPLA4-201ENST00000381042 LRRC9Q6ZRR7 1453 aa16.27■□□□□ 0.19
PNPLA4-201ENST00000381042 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.19
PNPLA4-201ENST00000381042 PRDM2Q13029 1718 aa16.26■□□□□ 0.19
PNPLA4-201ENST00000381042 TIAM1Q13009 1591 aa16.25■□□□□ 0.19
PNPLA4-201ENST00000381042 MTUS2Q5JR59 1369 aa16.25■□□□□ 0.19
PNPLA4-201ENST00000381042 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
PNPLA4-201ENST00000381042 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
PNPLA4-201ENST00000381042 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
PNPLA4-201ENST00000381042 CHIC2Q9UKJ5 165 aa16.22■□□□□ 0.19
PNPLA4-201ENST00000381042 SETD5Q9C0A6 1442 aa16.22■□□□□ 0.19
PNPLA4-201ENST00000381042 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
PNPLA4-201ENST00000381042 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
PNPLA4-201ENST00000381042 GAPVD1Q14C86 1478 aa16.19■□□□□ 0.18
PNPLA4-201ENST00000381042 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
PNPLA4-201ENST00000381042 RRP7BPQ9NSQ0 103 aa16.16■□□□□ 0.18
PNPLA4-201ENST00000381042 FBLN2P98095 1184 aa16.15■□□□□ 0.18
PNPLA4-201ENST00000381042 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
PNPLA4-201ENST00000381042 TRIM52Q96A61 297 aa16.12■□□□□ 0.17
PNPLA4-201ENST00000381042 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
PNPLA4-201ENST00000381042 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
PNPLA4-201ENST00000381042 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
PNPLA4-201ENST00000381042 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
PNPLA4-201ENST00000381042 FYCO1Q9BQS8 1478 aa16.08■□□□□ 0.16
PNPLA4-201ENST00000381042 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
PNPLA4-201ENST00000381042 FGD6Q6ZV73 1430 aa16.06■□□□□ 0.16
PNPLA4-201ENST00000381042 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
PNPLA4-201ENST00000381042 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
PNPLA4-201ENST00000381042 CUL7Q14999 1698 aa16.04■□□□□ 0.16
PNPLA4-201ENST00000381042 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
PNPLA4-201ENST00000381042 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.15
PNPLA4-201ENST00000381042 FOXD1Q16676 465 aa16■□□□□ 0.15
PNPLA4-201ENST00000381042 PELP1Q8IZL8 1130 aaKnown RBP16■□□□□ 0.15
PNPLA4-201ENST00000381042 NCOA2Q15596 1464 aa16■□□□□ 0.15
PNPLA4-201ENST00000381042 PTPRKQ15262 1439 aa15.99■□□□□ 0.15
PNPLA4-201ENST00000381042 WDR97A6NE52 1622 aa15.99■□□□□ 0.15
PNPLA4-201ENST00000381042 CFAP43Q8NDM7 1665 aa15.99■□□□□ 0.15
PNPLA4-201ENST00000381042 PPP1R15AO75807 674 aaPredicted RBP15.98■□□□□ 0.15
PNPLA4-201ENST00000381042 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
PNPLA4-201ENST00000381042 SNAPC4Q5SXM2 1469 aa15.98■□□□□ 0.15
PNPLA4-201ENST00000381042 ZNF777Q9ULD5 760 aaPredicted RBP15.98■□□□□ 0.15
PNPLA4-201ENST00000381042 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
PNPLA4-201ENST00000381042 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.14
PNPLA4-201ENST00000381042 CHMP7Q8WUX9 453 aaPredicted RBP15.95■□□□□ 0.14
PNPLA4-201ENST00000381042 MYOM3Q5VTT5 1437 aa15.95■□□□□ 0.14
PNPLA4-201ENST00000381042 ABCA5Q8WWZ7 1642 aa15.95■□□□□ 0.14
PNPLA4-201ENST00000381042 BCANQ96GW7 911 aa15.94■□□□□ 0.14
PNPLA4-201ENST00000381042 CNGB1Q14028 1251 aaPredicted RBP15.93■□□□□ 0.14
PNPLA4-201ENST00000381042 CDK13Q14004 1512 aaKnown RBP15.92■□□□□ 0.14
PNPLA4-201ENST00000381042 ZNF644Q9H582 1327 aaPredicted RBP15.92■□□□□ 0.14
PNPLA4-201ENST00000381042 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
PNPLA4-201ENST00000381042 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
PNPLA4-201ENST00000381042 MRC2Q9UBG0 1479 aa15.89■□□□□ 0.13
PNPLA4-201ENST00000381042 ANP32CO43423 234 aa15.89■□□□□ 0.13
PNPLA4-201ENST00000381042 NAIPQ13075 1403 aa15.88■□□□□ 0.13
PNPLA4-201ENST00000381042 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
PNPLA4-201ENST00000381042 MAGI3Q5TCQ9 1506 aa15.86■□□□□ 0.13
PNPLA4-201ENST00000381042 HFM1A2PYH4 1435 aa15.86■□□□□ 0.13
PNPLA4-201ENST00000381042 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
PNPLA4-201ENST00000381042 SAMD9Q5K651 1589 aa15.85■□□□□ 0.13
PNPLA4-201ENST00000381042 UACAQ9BZF9 1416 aa15.85■□□□□ 0.13
PNPLA4-201ENST00000381042 POLR3GLQ9BT43 218 aa15.84■□□□□ 0.13
PNPLA4-201ENST00000381042 IQGAP2Q13576 1575 aa15.84■□□□□ 0.13
PNPLA4-201ENST00000381042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.84■□□□□ 0.13
PNPLA4-201ENST00000381042 EPRSP07814 1512 aaKnown RBP15.84■□□□□ 0.13
PNPLA4-201ENST00000381042 TIMELESSQ9UNS1 1208 aa15.83■□□□□ 0.13
PNPLA4-201ENST00000381042 SUPT16HQ9Y5B9 1047 aaKnown RBP15.83■□□□□ 0.13
PNPLA4-201ENST00000381042 CDK11AQ9UQ88 783 aaPredicted RBP15.83■□□□□ 0.12
PNPLA4-201ENST00000381042 EHBP1L1Q8N3D4 1523 aa15.83■□□□□ 0.12
PNPLA4-201ENST00000381042 MPHOSPH9Q99550 1183 aa15.83■□□□□ 0.12
PNPLA4-201ENST00000381042 SUPT6HQ7KZ85 1726 aaKnown RBP15.82■□□□□ 0.12
PNPLA4-201ENST00000381042 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
PNPLA4-201ENST00000381042 LRRIQ1Q96JM4 1722 aa15.81■□□□□ 0.12
PNPLA4-201ENST00000381042 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
PNPLA4-201ENST00000381042 PTPN23Q9H3S7 1636 aa15.8■□□□□ 0.12
PNPLA4-201ENST00000381042 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
PNPLA4-201ENST00000381042 HSPA5P11021 654 aaKnown RBP15.78■□□□□ 0.12
PNPLA4-201ENST00000381042 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
PNPLA4-201ENST00000381042 ADAMTS12P58397 1594 aa15.77■□□□□ 0.12
PNPLA4-201ENST00000381042 PBRM1Q86U86 1689 aa15.77■□□□□ 0.12
PNPLA4-201ENST00000381042 UGGT2Q9NYU1 1516 aa15.77■□□□□ 0.12
PNPLA4-201ENST00000381042 IFT140Q96RY7 1462 aa15.77■□□□□ 0.11
PNPLA4-201ENST00000381042 FKBP8Q14318 412 aa15.76■□□□□ 0.11
PNPLA4-201ENST00000381042 JPH4Q96JJ6 628 aa15.76■□□□□ 0.11
PNPLA4-201ENST00000381042 HECW1Q76N89 1606 aa15.76■□□□□ 0.11
PNPLA4-201ENST00000381042 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
PNPLA4-201ENST00000381042 EIF4G2P78344 907 aaKnown RBP eCLIP15.73■□□□□ 0.11
PNPLA4-201ENST00000381042 PLB1Q6P1J6 1458 aa15.71■□□□□ 0.11
PNPLA4-201ENST00000381042 KIAA0586Q9BVV6 1533 aa15.71■□□□□ 0.11
PNPLA4-201ENST00000381042 NEFLP07196 543 aa15.7■□□□□ 0.1
PNPLA4-201ENST00000381042 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.1
PNPLA4-201ENST00000381042 GRIN2AQ12879 1464 aa15.7■□□□□ 0.1
PNPLA4-201ENST00000381042 PLEKHD1A6NEE1 506 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms