RNA–Protein interactions for RNA: ENST00000381042.8

PNPLA4-201, Transcript of patatin like phospholipase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNPLA4, Length 3,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA4-201ENST00000381042 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
PNPLA4-201ENST00000381042 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
PNPLA4-201ENST00000381042 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
PNPLA4-201ENST00000381042 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.77
PNPLA4-201ENST00000381042 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
PNPLA4-201ENST00000381042 CCDC180Q9P1Z9 1646 aa19.41■□□□□ 0.7
PNPLA4-201ENST00000381042 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
PNPLA4-201ENST00000381042 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
PNPLA4-201ENST00000381042 ABCC9O60706 1549 aa18.69■□□□□ 0.58
PNPLA4-201ENST00000381042 DCAF1Q9Y4B6 1507 aa18.67■□□□□ 0.58
PNPLA4-201ENST00000381042 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
PNPLA4-201ENST00000381042 LOC105371045A0A1W2PR82 267 aa18.58■□□□□ 0.56
PNPLA4-201ENST00000381042 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
PNPLA4-201ENST00000381042 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
PNPLA4-201ENST00000381042 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
PNPLA4-201ENST00000381042 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
PNPLA4-201ENST00000381042 TRIM41Q8WV44 630 aa18.32■□□□□ 0.52
PNPLA4-201ENST00000381042 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
PNPLA4-201ENST00000381042 HRCP23327 699 aa18.14■□□□□ 0.49
PNPLA4-201ENST00000381042 RB1CC1Q8TDY2 1594 aa18.14■□□□□ 0.49
PNPLA4-201ENST00000381042 NACADO15069 1562 aa18.12■□□□□ 0.49
PNPLA4-201ENST00000381042 PPARGC1BQ86YN6 1023 aaKnown RBP18.06■□□□□ 0.48
PNPLA4-201ENST00000381042 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
PNPLA4-201ENST00000381042 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
PNPLA4-201ENST00000381042 WIZO95785 1651 aa17.93■□□□□ 0.46
PNPLA4-201ENST00000381042 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
PNPLA4-201ENST00000381042 TTBK1Q5TCY1 1321 aaPredicted RBP17.83■□□□□ 0.44
PNPLA4-201ENST00000381042 BAZ1AQ9NRL2 1556 aaPredicted RBP17.73■□□□□ 0.43
PNPLA4-201ENST00000381042 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
PNPLA4-201ENST00000381042 CCDC88BA6NC98 1476 aa17.61■□□□□ 0.41
PNPLA4-201ENST00000381042 UBTFP17480 764 aaKnown RBP17.58■□□□□ 0.41
PNPLA4-201ENST00000381042 SMARCA4P51532 1647 aa17.58■□□□□ 0.4
PNPLA4-201ENST00000381042 RANGAP1P46060 587 aaPredicted RBP17.54■□□□□ 0.4
PNPLA4-201ENST00000381042 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
PNPLA4-201ENST00000381042 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
PNPLA4-201ENST00000381042 SOGA1O94964 1423 aa17.48■□□□□ 0.39
PNPLA4-201ENST00000381042 SMARCA2P51531 1590 aa17.46■□□□□ 0.39
PNPLA4-201ENST00000381042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
PNPLA4-201ENST00000381042 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
PNPLA4-201ENST00000381042 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
PNPLA4-201ENST00000381042 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.38
PNPLA4-201ENST00000381042 CCER1Q8TC90 406 aaPredicted RBP17.38■□□□□ 0.37
PNPLA4-201ENST00000381042 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
PNPLA4-201ENST00000381042 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
PNPLA4-201ENST00000381042 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.36
PNPLA4-201ENST00000381042 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
PNPLA4-201ENST00000381042 BAZ1BQ9UIG0 1483 aaKnown RBP17.28■□□□□ 0.36
PNPLA4-201ENST00000381042 ATAD2BQ9ULI0 1458 aa17.26■□□□□ 0.35
PNPLA4-201ENST00000381042 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
PNPLA4-201ENST00000381042 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
PNPLA4-201ENST00000381042 APLP2Q06481 763 aa17.15■□□□□ 0.34
PNPLA4-201ENST00000381042 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
PNPLA4-201ENST00000381042 EEA1Q15075 1411 aa17.11■□□□□ 0.33
PNPLA4-201ENST00000381042 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
PNPLA4-201ENST00000381042 CLIP1P30622 1438 aa17.04■□□□□ 0.32
PNPLA4-201ENST00000381042 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
PNPLA4-201ENST00000381042 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
PNPLA4-201ENST00000381042 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
PNPLA4-201ENST00000381042 ITGAEP38570 1179 aa16.88■□□□□ 0.29
PNPLA4-201ENST00000381042 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
PNPLA4-201ENST00000381042 ATP1B4Q9UN42 357 aaPredicted RBP16.86■□□□□ 0.29
PNPLA4-201ENST00000381042 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
PNPLA4-201ENST00000381042 VPS8Q8N3P4 1428 aa16.84■□□□□ 0.29
PNPLA4-201ENST00000381042 KIF21BO75037 1637 aa16.8■□□□□ 0.28
PNPLA4-201ENST00000381042 P3H3Q8IVL6 736 aa16.8■□□□□ 0.28
PNPLA4-201ENST00000381042 TOP2BQ02880 1626 aa16.79■□□□□ 0.28
PNPLA4-201ENST00000381042 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
PNPLA4-201ENST00000381042 CUX1P39880 1505 aa16.78■□□□□ 0.28
PNPLA4-201ENST00000381042 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
PNPLA4-201ENST00000381042 YTHDC1Q96MU7 727 aaKnown RBP16.75■□□□□ 0.27
PNPLA4-201ENST00000381042 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
PNPLA4-201ENST00000381042 CUX2O14529 1486 aa16.72■□□□□ 0.27
PNPLA4-201ENST00000381042 CFTRP13569 1480 aa16.71■□□□□ 0.27
PNPLA4-201ENST00000381042 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
PNPLA4-201ENST00000381042 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
PNPLA4-201ENST00000381042 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
PNPLA4-201ENST00000381042 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
PNPLA4-201ENST00000381042 NEUROD1Q13562 356 aa16.64■□□□□ 0.26
PNPLA4-201ENST00000381042 ARAP1Q96P48 1450 aa16.64■□□□□ 0.26
PNPLA4-201ENST00000381042 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
PNPLA4-201ENST00000381042 IGF1RP08069 1367 aa16.6■□□□□ 0.25
PNPLA4-201ENST00000381042 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
PNPLA4-201ENST00000381042 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.25
PNPLA4-201ENST00000381042 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.24
PNPLA4-201ENST00000381042 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
PNPLA4-201ENST00000381042 CC2D2AQ9P2K1 1620 aa16.57■□□□□ 0.24
PNPLA4-201ENST00000381042 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
PNPLA4-201ENST00000381042 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
PNPLA4-201ENST00000381042 ERICH3Q5RHP9 1530 aa16.56■□□□□ 0.24
PNPLA4-201ENST00000381042 NESP48681 1621 aa16.55■□□□□ 0.24
PNPLA4-201ENST00000381042 MIER1Q8N108 512 aa16.54■□□□□ 0.24
PNPLA4-201ENST00000381042 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
PNPLA4-201ENST00000381042 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
PNPLA4-201ENST00000381042 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
PNPLA4-201ENST00000381042 GTF3C3Q9Y5Q9 886 aa16.51■□□□□ 0.23
PNPLA4-201ENST00000381042 CCNB3Q8WWL7 1395 aa16.47■□□□□ 0.23
PNPLA4-201ENST00000381042 DHX57Q6P158 1386 aaKnown RBP16.45■□□□□ 0.22
PNPLA4-201ENST00000381042 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
PNPLA4-201ENST00000381042 ARID3CA6NKF2 412 aa16.43■□□□□ 0.22
PNPLA4-201ENST00000381042 FHOD3Q2V2M9 1422 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms