RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 FHOD3Q2V2M9 1422 aa15.66■□□□□ 0.1
DNMT3A-203ENST00000380746 NESP48681 1621 aa15.66■□□□□ 0.1
DNMT3A-203ENST00000380746 DHX57Q6P158 1386 aaKnown RBP15.65■□□□□ 0.1
DNMT3A-203ENST00000380746 ZNF777Q9ULD5 760 aaPredicted RBP15.63■□□□□ 0.09
DNMT3A-203ENST00000380746 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
DNMT3A-203ENST00000380746 RAB3GAP2Q9H2M9 1393 aa15.63■□□□□ 0.09
DNMT3A-203ENST00000380746 FGD5Q6ZNL6 1462 aa15.62■□□□□ 0.09
DNMT3A-203ENST00000380746 TOP2BQ02880 1626 aa15.62■□□□□ 0.09
DNMT3A-203ENST00000380746 ZNF326Q5BKZ1 582 aaKnown RBP15.62■□□□□ 0.09
DNMT3A-203ENST00000380746 PRXQ9BXM0 1461 aa15.61■□□□□ 0.09
DNMT3A-203ENST00000380746 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
DNMT3A-203ENST00000380746 CFTRP13569 1480 aa15.6■□□□□ 0.09
DNMT3A-203ENST00000380746 ARHGAP35Q9NRY4 1499 aa15.58■□□□□ 0.09
DNMT3A-203ENST00000380746 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
DNMT3A-203ENST00000380746 FANCD2Q9BXW9 1451 aa15.57■□□□□ 0.08
DNMT3A-203ENST00000380746 FOXD1Q16676 465 aa15.56■□□□□ 0.08
DNMT3A-203ENST00000380746 PHLDB1Q86UU1 1377 aa15.54■□□□□ 0.08
DNMT3A-203ENST00000380746 TONSLQ96HA7 1378 aa15.51■□□□□ 0.07
DNMT3A-203ENST00000380746 ANP32CO43423 234 aa15.49■□□□□ 0.07
DNMT3A-203ENST00000380746 BCL11AQ9H165 835 aa15.48■□□□□ 0.07
DNMT3A-203ENST00000380746 ERICH6Q7L0X2 663 aa15.47■□□□□ 0.07
DNMT3A-203ENST00000380746 CC2D2AQ9P2K1 1620 aa15.47■□□□□ 0.07
DNMT3A-203ENST00000380746 SETD5Q9C0A6 1442 aa15.47■□□□□ 0.07
DNMT3A-203ENST00000380746 NEFLP07196 543 aa15.45■□□□□ 0.06
DNMT3A-203ENST00000380746 HMGXB3Q12766 1538 aa15.45■□□□□ 0.06
DNMT3A-203ENST00000380746 FKBP8Q14318 412 aa15.44■□□□□ 0.06
DNMT3A-203ENST00000380746 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
DNMT3A-203ENST00000380746 IRX6P78412 446 aaPredicted RBP15.44■□□□□ 0.06
DNMT3A-203ENST00000380746 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
DNMT3A-203ENST00000380746 ERICH3Q5RHP9 1530 aa15.41■□□□□ 0.06
DNMT3A-203ENST00000380746 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
DNMT3A-203ENST00000380746 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
DNMT3A-203ENST00000380746 POLA1P09884 1462 aaPredicted RBP15.37■□□□□ 0.05
DNMT3A-203ENST00000380746 LRRC9Q6ZRR7 1453 aa15.36■□□□□ 0.05
DNMT3A-203ENST00000380746 RRBP1Q9P2E9 1410 aaKnown RBP15.36■□□□□ 0.05
DNMT3A-203ENST00000380746 BIVM-ERCC5R4GMW8 1640 aa15.35■□□□□ 0.05
DNMT3A-203ENST00000380746 HNRNPUQ00839 825 aaKnown RBP eCLIP15.35■□□□□ 0.05
DNMT3A-203ENST00000380746 AQRO60306 1485 aaKnown RBP eCLIP15.35■□□□□ 0.051e-7■■■■■ 30
DNMT3A-203ENST00000380746 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
DNMT3A-203ENST00000380746 SUPT16HQ9Y5B9 1047 aaKnown RBP15.34■□□□□ 0.05
DNMT3A-203ENST00000380746 PPP1R15AO75807 674 aaPredicted RBP15.33■□□□□ 0.04
DNMT3A-203ENST00000380746 SLC4A1APQ9BWU0 796 aaKnown RBP15.33■□□□□ 0.04
DNMT3A-203ENST00000380746 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
DNMT3A-203ENST00000380746 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
DNMT3A-203ENST00000380746 ZNF644Q9H582 1327 aaPredicted RBP15.32■□□□□ 0.04
DNMT3A-203ENST00000380746 MYT1LQ9UL68 1186 aa15.31■□□□□ 0.04
DNMT3A-203ENST00000380746 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
DNMT3A-203ENST00000380746 GAPVD1Q14C86 1478 aa15.28■□□□□ 0.04
DNMT3A-203ENST00000380746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.036e-7■■□□□ 13.3
DNMT3A-203ENST00000380746 FMN1Q68DA7 1419 aa15.26■□□□□ 0.03
DNMT3A-203ENST00000380746 CFDP1Q9UEE9 299 aaPredicted RBP15.26■□□□□ 0.03
DNMT3A-203ENST00000380746 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
DNMT3A-203ENST00000380746 TIAM1Q13009 1591 aa15.25■□□□□ 0.03
DNMT3A-203ENST00000380746 SALL2Q9Y467 1007 aaPredicted RBP15.25■□□□□ 0.03
DNMT3A-203ENST00000380746 HSPA5P11021 654 aaKnown RBP15.24■□□□□ 0.03
DNMT3A-203ENST00000380746 MPHOSPH9Q99550 1183 aa15.22■□□□□ 0.03
DNMT3A-203ENST00000380746 PCF11O94913 1555 aaKnown RBP15.22■□□□□ 0.03
DNMT3A-203ENST00000380746 L3MBTL2Q969R5 705 aa15.22■□□□□ 0.03
DNMT3A-203ENST00000380746 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.03
DNMT3A-203ENST00000380746 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.03
DNMT3A-203ENST00000380746 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
DNMT3A-203ENST00000380746 WDR97A6NE52 1622 aa15.2■□□□□ 0.02
DNMT3A-203ENST00000380746 RGL3Q3MIN7 710 aa15.2■□□□□ 0.02
DNMT3A-203ENST00000380746 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
DNMT3A-203ENST00000380746 MRS2Q9HD23 443 aa15.18■□□□□ 0.02
DNMT3A-203ENST00000380746 CCDC18Q5T9S5 1454 aa15.17■□□□□ 0.02
DNMT3A-203ENST00000380746 CASKIN1Q8WXD9 1431 aa15.17■□□□□ 0.02
DNMT3A-203ENST00000380746 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
DNMT3A-203ENST00000380746 NCOA2Q15596 1464 aa15.15■□□□□ 0.02
DNMT3A-203ENST00000380746 PTPRKQ15262 1439 aa15.14■□□□□ 0.01
DNMT3A-203ENST00000380746 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
DNMT3A-203ENST00000380746 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
DNMT3A-203ENST00000380746 PLEKHD1A6NEE1 506 aa15.14■□□□□ 0.01
DNMT3A-203ENST00000380746 MAPKBP1O60336 1514 aa15.11■□□□□ 0.01
DNMT3A-203ENST00000380746 TSPY4P0CV99 314 aa15.11■□□□□ 0.01
DNMT3A-203ENST00000380746 TSPY10P0CW01 314 aa15.11■□□□□ 0.01
DNMT3A-203ENST00000380746 PKD2Q13563 968 aa15.1■□□□□ 0.01
DNMT3A-203ENST00000380746 HNRNPMP52272 730 aaKnown RBP eCLIP15.1■□□□□ 0.01
DNMT3A-203ENST00000380746 MYOM3Q5VTT5 1437 aa15.09■□□□□ 0.01
DNMT3A-203ENST00000380746 JPH4Q96JJ6 628 aa15.09■□□□□ 0.01
DNMT3A-203ENST00000380746 CDK13Q14004 1512 aaKnown RBP15.09■□□□□ 0.01
DNMT3A-203ENST00000380746 FYCO1Q9BQS8 1478 aa15.08■□□□□ 0.01
DNMT3A-203ENST00000380746 CCDC184Q52MB2 194 aa15.08■□□□□ 0.01
DNMT3A-203ENST00000380746 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
DNMT3A-203ENST00000380746 TIMELESSQ9UNS1 1208 aa15.05■□□□□ -0
DNMT3A-203ENST00000380746 NBPF8Q3BBV2 869 aa15.04■□□□□ -0
DNMT3A-203ENST00000380746 C11orf95C9JLR9 678 aaPredicted RBP15.03■□□□□ -0
DNMT3A-203ENST00000380746 DCAF11Q8TEB1 546 aa15.03■□□□□ -0
DNMT3A-203ENST00000380746 WASHC2AQ641Q2 1341 aa15.03■□□□□ -0
DNMT3A-203ENST00000380746 NAIPQ13075 1403 aa15.03■□□□□ -0
DNMT3A-203ENST00000380746 TSHZ2Q9NRE2 1034 aa15.03■□□□□ -0
DNMT3A-203ENST00000380746 UACAQ9BZF9 1416 aa15.01□□□□□ -0.01
DNMT3A-203ENST00000380746 CARD11Q9BXL7 1154 aa15.01□□□□□ -0.01
DNMT3A-203ENST00000380746 PRG4Q92954 1404 aaPredicted RBP15□□□□□ -0.01
DNMT3A-203ENST00000380746 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
DNMT3A-203ENST00000380746 TMC1Q8TDI8 760 aa14.98□□□□□ -0.01
DNMT3A-203ENST00000380746 B4GALNT3Q6L9W6 998 aa14.97□□□□□ -0.01
DNMT3A-203ENST00000380746 NUP155O75694 1391 aa14.97□□□□□ -0.01
DNMT3A-203ENST00000380746 HFM1A2PYH4 1435 aa14.97□□□□□ -0.01
DNMT3A-203ENST00000380746 CCER2I3L3R5 266 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms