RNA–Protein interactions for RNA: ENST00000378755.9

ATAD3A-202, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2 BASIC

Gene ATAD3A, Length 2,612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-202ENST00000378755 ARHGAP35Q9NRY4 1499 aa29.34■■■□□ 2.29
ATAD3A-202ENST00000378755 IGF1RP08069 1367 aa29.33■■■□□ 2.29
ATAD3A-202ENST00000378755 CC2D2AQ9P2K1 1620 aa29.32■■■□□ 2.28
ATAD3A-202ENST00000378755 DEKP35659 375 aaKnown RBP29.32■■■□□ 2.28
ATAD3A-202ENST00000378755 KANK4Q5T7N3 995 aaPredicted RBP29.31■■■□□ 2.28
ATAD3A-202ENST00000378755 ANO8Q9HCE9 1232 aaPredicted RBP29.3■■■□□ 2.28
ATAD3A-202ENST00000378755 DDX10Q13206 875 aaKnown RBP29.29■■■□□ 2.28
ATAD3A-202ENST00000378755 FANCIQ9NVI1 1328 aa29.29■■■□□ 2.28
ATAD3A-202ENST00000378755 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
ATAD3A-202ENST00000378755 RRBP1Q9P2E9 1410 aaKnown RBP29.24■■■□□ 2.27
ATAD3A-202ENST00000378755 CARMIL1Q5VZK9 1371 aa29.21■■■□□ 2.27
ATAD3A-202ENST00000378755 IRX6P78412 446 aaPredicted RBP29.18■■■□□ 2.26
ATAD3A-202ENST00000378755 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
ATAD3A-202ENST00000378755 CDK11AQ9UQ88 783 aaPredicted RBP29.12■■■□□ 2.25
ATAD3A-202ENST00000378755 MAP3K1Q13233 1512 aa29.1■■■□□ 2.25
ATAD3A-202ENST00000378755 CCNB3Q8WWL7 1395 aa29.09■■■□□ 2.25
ATAD3A-202ENST00000378755 DNMBPQ6XZF7 1577 aa29.08■■■□□ 2.25
ATAD3A-202ENST00000378755 HIRIP3Q9BW71 556 aaPredicted RBP29.06■■■□□ 2.24
ATAD3A-202ENST00000378755 TIAM1Q13009 1591 aa29.04■■■□□ 2.24
ATAD3A-202ENST00000378755 NBR1Q14596 966 aa29.01■■■□□ 2.23
ATAD3A-202ENST00000378755 ABCA10Q8WWZ4 1543 aa29■■■□□ 2.23
ATAD3A-202ENST00000378755 MYT1LQ9UL68 1186 aa29■■■□□ 2.23
ATAD3A-202ENST00000378755 SALL2Q9Y467 1007 aaPredicted RBP29■■■□□ 2.23
ATAD3A-202ENST00000378755 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
ATAD3A-202ENST00000378755 PPP1R15AO75807 674 aaPredicted RBP28.98■■■□□ 2.23
ATAD3A-202ENST00000378755 POLA1P09884 1462 aaPredicted RBP28.96■■■□□ 2.23
ATAD3A-202ENST00000378755 FHAD1B1AJZ9 1412 aa28.96■■■□□ 2.23
ATAD3A-202ENST00000378755 RAD54L2Q9Y4B4 1467 aa28.95■■■□□ 2.22
ATAD3A-202ENST00000378755 LRRC9Q6ZRR7 1453 aa28.92■■■□□ 2.22
ATAD3A-202ENST00000378755 NESP48681 1621 aa28.91■■■□□ 2.22
ATAD3A-202ENST00000378755 WDR97A6NE52 1622 aa28.9■■■□□ 2.22
ATAD3A-202ENST00000378755 CCDC136Q96JN2 1154 aa28.9■■■□□ 2.22
ATAD3A-202ENST00000378755 ANP32CO43423 234 aa28.89■■■□□ 2.22
ATAD3A-202ENST00000378755 CCER2I3L3R5 266 aa28.88■■■□□ 2.21
ATAD3A-202ENST00000378755 CUL7Q14999 1698 aa28.88■■■□□ 2.21
ATAD3A-202ENST00000378755 CFAP43Q8NDM7 1665 aa28.87■■■□□ 2.21
ATAD3A-202ENST00000378755 PCF11O94913 1555 aaKnown RBP28.85■■■□□ 2.21
ATAD3A-202ENST00000378755 SIN3AQ96ST3 1273 aa28.84■■■□□ 2.21
ATAD3A-202ENST00000378755 MAPKBP1O60336 1514 aa28.84■■■□□ 2.21
ATAD3A-202ENST00000378755 LAMC3Q9Y6N6 1575 aa28.84■■■□□ 2.21
ATAD3A-202ENST00000378755 EFCAB5A4FU69 1503 aa28.83■■■□□ 2.21
ATAD3A-202ENST00000378755 PAK3O75914 559 aaPredicted RBP28.83■■■□□ 2.21
ATAD3A-202ENST00000378755 PHLDB1Q86UU1 1377 aa28.78■■■□□ 2.2
ATAD3A-202ENST00000378755 HNRNPUQ00839 825 aaKnown RBP eCLIP28.77■■■□□ 2.2
ATAD3A-202ENST00000378755 NOP58Q9Y2X3 529 aaKnown RBP28.77■■■□□ 2.2
ATAD3A-202ENST00000378755 CTTNBP2Q8WZ74 1663 aa28.77■■■□□ 2.2
ATAD3A-202ENST00000378755 P3H3Q8IVL6 736 aa28.77■■■□□ 2.2
ATAD3A-202ENST00000378755 RAB3GAP2Q9H2M9 1393 aa28.77■■■□□ 2.2
ATAD3A-202ENST00000378755 FYCO1Q9BQS8 1478 aa28.76■■■□□ 2.19
ATAD3A-202ENST00000378755 FHOD3Q2V2M9 1422 aa28.76■■■□□ 2.19
ATAD3A-202ENST00000378755 URB2Q14146 1524 aaKnown RBP28.75■■■□□ 2.19
ATAD3A-202ENST00000378755 RTN4Q9NQC3 1192 aaKnown RBP28.74■■■□□ 2.19
ATAD3A-202ENST00000378755 AQRO60306 1485 aaKnown RBP eCLIP28.74■■■□□ 2.195e-7■■■■□ 22.6
ATAD3A-202ENST00000378755 IL27Q8NEV9 243 aa28.73■■■□□ 2.19
ATAD3A-202ENST00000378755 CASKIN1Q8WXD9 1431 aa28.72■■■□□ 2.19
ATAD3A-202ENST00000378755 SETD5Q9C0A6 1442 aa28.71■■■□□ 2.19
ATAD3A-202ENST00000378755 B4GALNT3Q6L9W6 998 aa28.69■■■□□ 2.18
ATAD3A-202ENST00000378755 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.67■■■□□ 2.18
ATAD3A-202ENST00000378755 ATP1B4Q9UN42 357 aaPredicted RBP28.66■■■□□ 2.18
ATAD3A-202ENST00000378755 PPP4R2Q9NY27 417 aa28.65■■■□□ 2.18
ATAD3A-202ENST00000378755 ABCA5Q8WWZ7 1642 aa28.65■■■□□ 2.18
ATAD3A-202ENST00000378755 FAM50AQ14320 339 aaKnown RBP28.63■■■□□ 2.17
ATAD3A-202ENST00000378755 FMN1Q68DA7 1419 aa28.63■■■□□ 2.17
ATAD3A-202ENST00000378755 ERICH6BQ5W0A0 696 aa28.63■■■□□ 2.17
ATAD3A-202ENST00000378755 PDS5BQ9NTI5 1447 aa28.63■■■□□ 2.17
ATAD3A-202ENST00000378755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.59■■■□□ 2.17
ATAD3A-202ENST00000378755 GAPVD1Q14C86 1478 aa28.58■■■□□ 2.17
ATAD3A-202ENST00000378755 TDRD9Q8NDG6 1382 aaKnown RBP28.57■■■□□ 2.16
ATAD3A-202ENST00000378755 SNAPC4Q5SXM2 1469 aa28.55■■■□□ 2.16
ATAD3A-202ENST00000378755 SAMD9Q5K651 1589 aa28.54■■■□□ 2.16
ATAD3A-202ENST00000378755 RTL5Q5HYW3 569 aaPredicted RBP28.51■■■□□ 2.15
ATAD3A-202ENST00000378755 KIF21AQ7Z4S6 1674 aa28.48■■■□□ 2.15
ATAD3A-202ENST00000378755 FGD6Q6ZV73 1430 aa28.44■■■□□ 2.14
ATAD3A-202ENST00000378755 MTUS2Q5JR59 1369 aa28.42■■■□□ 2.14
ATAD3A-202ENST00000378755 TARBP1Q13395 1621 aaKnown RBP28.42■■■□□ 2.14
ATAD3A-202ENST00000378755 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
ATAD3A-202ENST00000378755 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
ATAD3A-202ENST00000378755 DNAJC5BQ9UF47 199 aa28.39■■■□□ 2.14
ATAD3A-202ENST00000378755 LRRIQ1Q96JM4 1722 aa28.38■■■□□ 2.13
ATAD3A-202ENST00000378755 TIMELESSQ9UNS1 1208 aa28.37■■■□□ 2.13
ATAD3A-202ENST00000378755 CCDC184Q52MB2 194 aa28.36■■■□□ 2.13
ATAD3A-202ENST00000378755 IPO9Q96P70 1041 aaKnown RBP28.36■■■□□ 2.13
ATAD3A-202ENST00000378755 UBE2Q2Q8WVN8 375 aa28.34■■■□□ 2.13
ATAD3A-202ENST00000378755 ZBTB47Q9UFB7 747 aaPredicted RBP28.33■■■□□ 2.13
ATAD3A-202ENST00000378755 ANP32AP39687 249 aaKnown RBP28.33■■■□□ 2.13
ATAD3A-202ENST00000378755 NCOA2Q15596 1464 aa28.31■■■□□ 2.12
ATAD3A-202ENST00000378755 EHBP1L1Q8N3D4 1523 aa28.3■■■□□ 2.12
ATAD3A-202ENST00000378755 SUPT6HQ7KZ85 1726 aaKnown RBP28.29■■■□□ 2.12
ATAD3A-202ENST00000378755 PBRM1Q86U86 1689 aa28.29■■■□□ 2.12
ATAD3A-202ENST00000378755 MYOM3Q5VTT5 1437 aa28.29■■■□□ 2.12
ATAD3A-202ENST00000378755 HFM1A2PYH4 1435 aa28.26■■■□□ 2.11
ATAD3A-202ENST00000378755 FAM9BQ8IZU0 186 aa28.25■■■□□ 2.11
ATAD3A-202ENST00000378755 CCDC18Q5T9S5 1454 aa28.24■■■□□ 2.11
ATAD3A-202ENST00000378755 PTPRKQ15262 1439 aa28.24■■■□□ 2.11
ATAD3A-202ENST00000378755 PTPN23Q9H3S7 1636 aa28.22■■■□□ 2.11
ATAD3A-202ENST00000378755 UGGT2Q9NYU1 1516 aa28.2■■■□□ 2.11
ATAD3A-202ENST00000378755 ADAMTS12P58397 1594 aa28.2■■■□□ 2.1
ATAD3A-202ENST00000378755 ARHGEF11O15085 1522 aa28.19■■■□□ 2.1
ATAD3A-202ENST00000378755 TONSLQ96HA7 1378 aa28.19■■■□□ 2.1
ATAD3A-202ENST00000378755 IQGAP2Q13576 1575 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms