RNA–Protein interactions for RNA: ENST00000378748.7

OPTN-203, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-203ENST00000378748 SALL2Q9Y467 1007 aaPredicted RBP11.97□□□□□ -0.49
OPTN-203ENST00000378748 HNRNPUQ00839 825 aaKnown RBP eCLIP11.96□□□□□ -0.49
OPTN-203ENST00000378748 CCNB3Q8WWL7 1395 aa11.96□□□□□ -0.49
OPTN-203ENST00000378748 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
OPTN-203ENST00000378748 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
OPTN-203ENST00000378748 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
OPTN-203ENST00000378748 KIF21BO75037 1637 aa11.94□□□□□ -0.5
OPTN-203ENST00000378748 DHX57Q6P158 1386 aaKnown RBP11.94□□□□□ -0.5
OPTN-203ENST00000378748 MTUS2Q5JR59 1369 aa11.93□□□□□ -0.5
OPTN-203ENST00000378748 RAB3GAP2Q9H2M9 1393 aa11.93□□□□□ -0.5
OPTN-203ENST00000378748 TDRD9Q8NDG6 1382 aaKnown RBP11.93□□□□□ -0.5
OPTN-203ENST00000378748 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
OPTN-203ENST00000378748 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
OPTN-203ENST00000378748 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
OPTN-203ENST00000378748 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
OPTN-203ENST00000378748 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
OPTN-203ENST00000378748 TOP2BQ02880 1626 aa11.88□□□□□ -0.51
OPTN-203ENST00000378748 ARAP1Q96P48 1450 aa11.87□□□□□ -0.51
OPTN-203ENST00000378748 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.52
OPTN-203ENST00000378748 MYT1Q01538 1121 aa11.82□□□□□ -0.52
OPTN-203ENST00000378748 RAD54L2Q9Y4B4 1467 aa11.82□□□□□ -0.52
OPTN-203ENST00000378748 ERICH3Q5RHP9 1530 aa11.82□□□□□ -0.52
OPTN-203ENST00000378748 CFTRP13569 1480 aa11.81□□□□□ -0.52
OPTN-203ENST00000378748 IGF1RP08069 1367 aa11.8□□□□□ -0.52
OPTN-203ENST00000378748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.8□□□□□ -0.521e-7■■■□□ 16.3
OPTN-203ENST00000378748 PHLDB1Q86UU1 1377 aa11.8□□□□□ -0.52
OPTN-203ENST00000378748 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
OPTN-203ENST00000378748 MRS2Q9HD23 443 aa11.78□□□□□ -0.52
OPTN-203ENST00000378748 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
OPTN-203ENST00000378748 CLSPNQ9HAW4 1339 aa11.77□□□□□ -0.53
OPTN-203ENST00000378748 RGL3Q3MIN7 710 aa11.76□□□□□ -0.53
OPTN-203ENST00000378748 NESP48681 1621 aa11.75□□□□□ -0.53
OPTN-203ENST00000378748 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
OPTN-203ENST00000378748 PRXQ9BXM0 1461 aa11.74□□□□□ -0.53
OPTN-203ENST00000378748 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
OPTN-203ENST00000378748 ARHGAP35Q9NRY4 1499 aa11.74□□□□□ -0.53
OPTN-203ENST00000378748 CUX1P39880 1505 aa11.74□□□□□ -0.53
OPTN-203ENST00000378748 HSPA5P11021 654 aaKnown RBP11.73□□□□□ -0.53
OPTN-203ENST00000378748 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
OPTN-203ENST00000378748 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
OPTN-203ENST00000378748 CHMP7Q8WUX9 453 aaPredicted RBP11.71□□□□□ -0.53
OPTN-203ENST00000378748 ZNF644Q9H582 1327 aaPredicted RBP11.71□□□□□ -0.54
OPTN-203ENST00000378748 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
OPTN-203ENST00000378748 B4GALNT3Q6L9W6 998 aa11.7□□□□□ -0.54
OPTN-203ENST00000378748 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
OPTN-203ENST00000378748 CDK11AQ9UQ88 783 aaPredicted RBP11.69□□□□□ -0.54
OPTN-203ENST00000378748 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
OPTN-203ENST00000378748 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
OPTN-203ENST00000378748 AEBP2Q6ZN18 517 aaPredicted RBP11.66□□□□□ -0.54
OPTN-203ENST00000378748 CCDC184Q52MB2 194 aa11.66□□□□□ -0.54
OPTN-203ENST00000378748 CFDP1Q9UEE9 299 aaPredicted RBP11.65□□□□□ -0.54
OPTN-203ENST00000378748 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
OPTN-203ENST00000378748 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
OPTN-203ENST00000378748 FHAD1B1AJZ9 1412 aa11.64□□□□□ -0.55
OPTN-203ENST00000378748 NBR1Q14596 966 aa11.64□□□□□ -0.55
OPTN-203ENST00000378748 MPHOSPH9Q99550 1183 aa11.63□□□□□ -0.55
OPTN-203ENST00000378748 TMC1Q8TDI8 760 aa11.61□□□□□ -0.55
OPTN-203ENST00000378748 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
OPTN-203ENST00000378748 WDR97A6NE52 1622 aa11.6□□□□□ -0.55
OPTN-203ENST00000378748 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
OPTN-203ENST00000378748 LRRC9Q6ZRR7 1453 aa11.59□□□□□ -0.55
OPTN-203ENST00000378748 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
OPTN-203ENST00000378748 PKD2Q13563 968 aa11.57□□□□□ -0.56
OPTN-203ENST00000378748 AQRO60306 1485 aaKnown RBP eCLIP11.57□□□□□ -0.563e-7■■□□□ 11.5
OPTN-203ENST00000378748 CHGAP10645 457 aaKnown RBP11.57□□□□□ -0.56
OPTN-203ENST00000378748 DCAF11Q8TEB1 546 aa11.57□□□□□ -0.56
OPTN-203ENST00000378748 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
OPTN-203ENST00000378748 TSPY4P0CV99 314 aa11.56□□□□□ -0.56
OPTN-203ENST00000378748 TSPY10P0CW01 314 aa11.56□□□□□ -0.56
OPTN-203ENST00000378748 CARD11Q9BXL7 1154 aa11.56□□□□□ -0.56
OPTN-203ENST00000378748 CCDC136Q96JN2 1154 aa11.55□□□□□ -0.56
OPTN-203ENST00000378748 MAP3K1Q13233 1512 aa11.55□□□□□ -0.56
OPTN-203ENST00000378748 CC2D1BQ5T0F9 858 aaKnown RBP11.55□□□□□ -0.56
OPTN-203ENST00000378748 C11orf95C9JLR9 678 aaPredicted RBP11.54□□□□□ -0.56
OPTN-203ENST00000378748 HNRNPMP52272 730 aaKnown RBP eCLIP11.54□□□□□ -0.56
OPTN-203ENST00000378748 PLEKHD1A6NEE1 506 aa11.53□□□□□ -0.56
OPTN-203ENST00000378748 CCDC18Q5T9S5 1454 aa11.53□□□□□ -0.56
OPTN-203ENST00000378748 DNMBPQ6XZF7 1577 aa11.53□□□□□ -0.56
OPTN-203ENST00000378748 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
OPTN-203ENST00000378748 NBPF8Q3BBV2 869 aa11.51□□□□□ -0.57
OPTN-203ENST00000378748 ANP32EQ9BTT0 268 aa11.51□□□□□ -0.57
OPTN-203ENST00000378748 FGD6Q6ZV73 1430 aa11.51□□□□□ -0.57
OPTN-203ENST00000378748 FMN1Q68DA7 1419 aa11.5□□□□□ -0.57
OPTN-203ENST00000378748 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
OPTN-203ENST00000378748 POLA1P09884 1462 aaPredicted RBP11.49□□□□□ -0.57
OPTN-203ENST00000378748 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
OPTN-203ENST00000378748 CCER2I3L3R5 266 aa11.47□□□□□ -0.57
OPTN-203ENST00000378748 TNNT2P45379 298 aaPredicted RBP11.47□□□□□ -0.57
OPTN-203ENST00000378748 PTPRKQ15262 1439 aa11.47□□□□□ -0.57
OPTN-203ENST00000378748 TIMELESSQ9UNS1 1208 aa11.46□□□□□ -0.57
OPTN-203ENST00000378748 GAPVD1Q14C86 1478 aa11.46□□□□□ -0.57
OPTN-203ENST00000378748 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.57
OPTN-203ENST00000378748 TIAM1Q13009 1591 aa11.46□□□□□ -0.57
OPTN-203ENST00000378748 TOPBP1Q92547 1522 aa11.46□□□□□ -0.58
OPTN-203ENST00000378748 PRKRIP1Q9H875 184 aaPredicted RBP11.46□□□□□ -0.58
OPTN-203ENST00000378748 CUL7Q14999 1698 aa11.45□□□□□ -0.58
OPTN-203ENST00000378748 ST20-MTHFSA0A0A6YYL1 179 aa11.45□□□□□ -0.58
OPTN-203ENST00000378748 NCOA2Q15596 1464 aa11.45□□□□□ -0.58
OPTN-203ENST00000378748 PCF11O94913 1555 aaKnown RBP11.45□□□□□ -0.58
OPTN-203ENST00000378748 PLPPR3Q6T4P5 718 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms