RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
DDR1-224ENST00000376567 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
DDR1-224ENST00000376567 FOXD1Q16676 465 aa17.4■□□□□ 0.38
DDR1-224ENST00000376567 FHOD3Q2V2M9 1422 aa17.39■□□□□ 0.38
DDR1-224ENST00000376567 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
DDR1-224ENST00000376567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
DDR1-224ENST00000376567 KDM2AQ9Y2K7 1162 aa17.38■□□□□ 0.37
DDR1-224ENST00000376567 CDK11AQ9UQ88 783 aaPredicted RBP17.38■□□□□ 0.37
DDR1-224ENST00000376567 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
DDR1-224ENST00000376567 FKBP8Q14318 412 aa17.36■□□□□ 0.37
DDR1-224ENST00000376567 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
DDR1-224ENST00000376567 FAM9BQ8IZU0 186 aa17.35■□□□□ 0.37
DDR1-224ENST00000376567 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
DDR1-224ENST00000376567 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
DDR1-224ENST00000376567 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
DDR1-224ENST00000376567 HNRNPUQ00839 825 aaKnown RBP eCLIP17.33■□□□□ 0.37
DDR1-224ENST00000376567 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
DDR1-224ENST00000376567 IGF1RP08069 1367 aa17.33■□□□□ 0.36
DDR1-224ENST00000376567 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
DDR1-224ENST00000376567 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
DDR1-224ENST00000376567 SALL2Q9Y467 1007 aaPredicted RBP17.31■□□□□ 0.36
DDR1-224ENST00000376567 NESP48681 1621 aa17.27■□□□□ 0.36
DDR1-224ENST00000376567 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.35
DDR1-224ENST00000376567 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
DDR1-224ENST00000376567 KIF21BO75037 1637 aa17.25■□□□□ 0.35
DDR1-224ENST00000376567 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
DDR1-224ENST00000376567 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
DDR1-224ENST00000376567 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
DDR1-224ENST00000376567 RGL3Q3MIN7 710 aa17.23■□□□□ 0.35
DDR1-224ENST00000376567 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
DDR1-224ENST00000376567 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
DDR1-224ENST00000376567 TSPY4P0CV99 314 aa17.19■□□□□ 0.34
DDR1-224ENST00000376567 TSPY10P0CW01 314 aa17.19■□□□□ 0.34
DDR1-224ENST00000376567 CFTRP13569 1480 aa17.18■□□□□ 0.34
DDR1-224ENST00000376567 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
DDR1-224ENST00000376567 CUX1P39880 1505 aa17.17■□□□□ 0.34
DDR1-224ENST00000376567 PLEKHD1A6NEE1 506 aa17.16■□□□□ 0.34
DDR1-224ENST00000376567 MYT1Q01538 1121 aa17.16■□□□□ 0.34
DDR1-224ENST00000376567 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.348e-8■■■■■ 39.6
DDR1-224ENST00000376567 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
DDR1-224ENST00000376567 PHLDB1Q86UU1 1377 aa17.13■□□□□ 0.33
DDR1-224ENST00000376567 ARHGAP35Q9NRY4 1499 aa17.13■□□□□ 0.33
DDR1-224ENST00000376567 CHGAP10645 457 aaKnown RBP17.13■□□□□ 0.33
DDR1-224ENST00000376567 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
DDR1-224ENST00000376567 CLSPNQ9HAW4 1339 aa17.11■□□□□ 0.33
DDR1-224ENST00000376567 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
DDR1-224ENST00000376567 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.325e-8■■■■■ 51
DDR1-224ENST00000376567 PPP1R15AO75807 674 aaPredicted RBP17.05■□□□□ 0.32
DDR1-224ENST00000376567 ZNF644Q9H582 1327 aaPredicted RBP17.05■□□□□ 0.32
DDR1-224ENST00000376567 TOP2BQ02880 1626 aa17.04■□□□□ 0.32
DDR1-224ENST00000376567 HSPA5P11021 654 aaKnown RBP17.03■□□□□ 0.32
DDR1-224ENST00000376567 SUPT16HQ9Y5B9 1047 aaKnown RBP17.03■□□□□ 0.32
DDR1-224ENST00000376567 FMN1Q68DA7 1419 aa17.02■□□□□ 0.31
DDR1-224ENST00000376567 MPHOSPH9Q99550 1183 aa17.01■□□□□ 0.31
DDR1-224ENST00000376567 TMC1Q8TDI8 760 aa17■□□□□ 0.31
DDR1-224ENST00000376567 L3MBTL2Q969R5 705 aa16.99■□□□□ 0.31
DDR1-224ENST00000376567 PKD2Q13563 968 aa16.97■□□□□ 0.31
DDR1-224ENST00000376567 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
DDR1-224ENST00000376567 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
DDR1-224ENST00000376567 HNRNPMP52272 730 aaKnown RBP eCLIP16.95■□□□□ 0.3
DDR1-224ENST00000376567 JPH4Q96JJ6 628 aa16.95■□□□□ 0.3
DDR1-224ENST00000376567 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
DDR1-224ENST00000376567 DCAF11Q8TEB1 546 aa16.95■□□□□ 0.3
DDR1-224ENST00000376567 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
DDR1-224ENST00000376567 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
DDR1-224ENST00000376567 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
DDR1-224ENST00000376567 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
DDR1-224ENST00000376567 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
DDR1-224ENST00000376567 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDR1-224ENST00000376567 NPM2Q86SE8 214 aaKnown RBP16.85■□□□□ 0.29
DDR1-224ENST00000376567 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
DDR1-224ENST00000376567 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.29
DDR1-224ENST00000376567 RRBP1Q9P2E9 1410 aaKnown RBP16.82■□□□□ 0.28
DDR1-224ENST00000376567 NUP155O75694 1391 aa16.82■□□□□ 0.28
DDR1-224ENST00000376567 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
DDR1-224ENST00000376567 CCDC18Q5T9S5 1454 aa16.82■□□□□ 0.28
DDR1-224ENST00000376567 TIMELESSQ9UNS1 1208 aa16.8■□□□□ 0.28
DDR1-224ENST00000376567 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
DDR1-224ENST00000376567 B4GALNT3Q6L9W6 998 aa16.79■□□□□ 0.28
DDR1-224ENST00000376567 CCDC136Q96JN2 1154 aa16.77■□□□□ 0.28
DDR1-224ENST00000376567 NCOA2Q15596 1464 aa16.76■□□□□ 0.27
DDR1-224ENST00000376567 DNMBPQ6XZF7 1577 aa16.75■□□□□ 0.27
DDR1-224ENST00000376567 CASKIN1Q8WXD9 1431 aa16.74■□□□□ 0.27
DDR1-224ENST00000376567 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
DDR1-224ENST00000376567 CARMIL2Q6F5E8 1435 aa16.73■□□□□ 0.27
DDR1-224ENST00000376567 DAXXQ9UER7 740 aaPredicted RBP16.72■□□□□ 0.27
DDR1-224ENST00000376567 MYOM3Q5VTT5 1437 aa16.72■□□□□ 0.27
DDR1-224ENST00000376567 URB2Q14146 1524 aaKnown RBP16.72■□□□□ 0.27
DDR1-224ENST00000376567 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
DDR1-224ENST00000376567 TIAM1Q13009 1591 aa16.71■□□□□ 0.26
DDR1-224ENST00000376567 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
DDR1-224ENST00000376567 CCER2I3L3R5 266 aa16.68■□□□□ 0.26
DDR1-224ENST00000376567 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
DDR1-224ENST00000376567 SAFB2Q14151 953 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDR1-224ENST00000376567 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
DDR1-224ENST00000376567 GGT6Q6P531 493 aa16.67■□□□□ 0.26
DDR1-224ENST00000376567 MRC2Q9UBG0 1479 aa16.66■□□□□ 0.26
DDR1-224ENST00000376567 PCF11O94913 1555 aaKnown RBP16.66■□□□□ 0.26
DDR1-224ENST00000376567 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
DDR1-224ENST00000376567 PRDM2Q13029 1718 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 436.9 ms