RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 ARID4BQ4LE39 1312 aaPredicted RBP14.74□□□□□ -0.05
MDC1-201ENST00000376406 PPP1R15AO75807 674 aaPredicted RBP14.74□□□□□ -0.05
MDC1-201ENST00000376406 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
MDC1-201ENST00000376406 TMC1Q8TDI8 760 aa14.73□□□□□ -0.05
MDC1-201ENST00000376406 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
MDC1-201ENST00000376406 NPM2Q86SE8 214 aaKnown RBP14.72□□□□□ -0.05
MDC1-201ENST00000376406 KCNH8Q96L42 1107 aa14.72□□□□□ -0.05
MDC1-201ENST00000376406 CECR2Q9BXF3 1484 aa14.71□□□□□ -0.05
MDC1-201ENST00000376406 EIF4G2P78344 907 aaKnown RBP eCLIP14.69□□□□□ -0.06
MDC1-201ENST00000376406 HDGFP51858 240 aaKnown RBP14.69□□□□□ -0.06
MDC1-201ENST00000376406 MRS2Q9HD23 443 aa14.68□□□□□ -0.06
MDC1-201ENST00000376406 TOP2AP11388 1531 aaKnown RBP14.68□□□□□ -0.06
MDC1-201ENST00000376406 CFDP1Q9UEE9 299 aaPredicted RBP14.68□□□□□ -0.06
MDC1-201ENST00000376406 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.68□□□□□ -0.06
MDC1-201ENST00000376406 CDCA8Q53HL2 280 aa14.67□□□□□ -0.06
MDC1-201ENST00000376406 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
MDC1-201ENST00000376406 KANK1Q14678 1352 aa14.66□□□□□ -0.06
MDC1-201ENST00000376406 UPF2Q9HAU5 1272 aaKnown RBP14.66□□□□□ -0.06
MDC1-201ENST00000376406 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
MDC1-201ENST00000376406 SMARCA4P51532 1647 aa14.65□□□□□ -0.06
MDC1-201ENST00000376406 CCDC136Q96JN2 1154 aa14.65□□□□□ -0.06
MDC1-201ENST00000376406 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
MDC1-201ENST00000376406 C14orf37Q86TY3 774 aa14.65□□□□□ -0.06
MDC1-201ENST00000376406 CUX2O14529 1486 aa14.65□□□□□ -0.06
MDC1-201ENST00000376406 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
MDC1-201ENST00000376406 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
MDC1-201ENST00000376406 WIZO95785 1651 aa14.63□□□□□ -0.07
MDC1-201ENST00000376406 KDM2AQ9Y2K7 1162 aa14.63□□□□□ -0.07
MDC1-201ENST00000376406 CCDC88BA6NC98 1476 aa14.62□□□□□ -0.07
MDC1-201ENST00000376406 CARMIL1Q5VZK9 1371 aa14.61□□□□□ -0.07
MDC1-201ENST00000376406 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
MDC1-201ENST00000376406 SOGA1O94964 1423 aa14.59□□□□□ -0.07
MDC1-201ENST00000376406 SALL2Q9Y467 1007 aaPredicted RBP14.59□□□□□ -0.07
MDC1-201ENST00000376406 HIRIP3Q9BW71 556 aaPredicted RBP14.59□□□□□ -0.07
MDC1-201ENST00000376406 CCNB3Q8WWL7 1395 aa14.57□□□□□ -0.08
MDC1-201ENST00000376406 HSP90AA1P07900 732 aaKnown RBP14.55□□□□□ -0.08
MDC1-201ENST00000376406 HAP1P54257 671 aaPredicted RBP14.55□□□□□ -0.08
MDC1-201ENST00000376406 ANP32BQ92688 251 aaKnown RBP14.55□□□□□ -0.08
MDC1-201ENST00000376406 VPS8Q8N3P4 1428 aa14.54□□□□□ -0.08
MDC1-201ENST00000376406 FMN1Q68DA7 1419 aa14.53□□□□□ -0.08
MDC1-201ENST00000376406 CADPSQ9ULU8 1353 aa14.52□□□□□ -0.08
MDC1-201ENST00000376406 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
MDC1-201ENST00000376406 IRX6P78412 446 aaPredicted RBP14.49□□□□□ -0.09
MDC1-201ENST00000376406 CFAP53Q96M91 514 aa14.48□□□□□ -0.09
MDC1-201ENST00000376406 SETD5Q9C0A6 1442 aa14.45□□□□□ -0.1
MDC1-201ENST00000376406 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
MDC1-201ENST00000376406 DDRGK1Q96HY6 314 aa14.45□□□□□ -0.1
MDC1-201ENST00000376406 NBR1Q14596 966 aa14.45□□□□□ -0.1
MDC1-201ENST00000376406 TIMELESSQ9UNS1 1208 aa14.44□□□□□ -0.1
MDC1-201ENST00000376406 MYH16Q9H6N6 1097 aa14.44□□□□□ -0.1
MDC1-201ENST00000376406 PNNQ9H307 717 aaKnown RBP14.43□□□□□ -0.1
MDC1-201ENST00000376406 CARD11Q9BXL7 1154 aa14.43□□□□□ -0.1
MDC1-201ENST00000376406 EIF5BO60841 1220 aaKnown RBP14.42□□□□□ -0.1
MDC1-201ENST00000376406 RSPH4AQ5TD94 716 aa14.42□□□□□ -0.1
MDC1-201ENST00000376406 SIN3AQ96ST3 1273 aa14.42□□□□□ -0.1
MDC1-201ENST00000376406 POGKQ9P215 609 aa14.41□□□□□ -0.1
MDC1-201ENST00000376406 KNSTRNQ9Y448 316 aa14.4□□□□□ -0.1
MDC1-201ENST00000376406 EFCAB2Q5VUJ9 269 aa14.39□□□□□ -0.11
MDC1-201ENST00000376406 FANCD2Q9BXW9 1451 aa14.39□□□□□ -0.11
MDC1-201ENST00000376406 CCDC18Q5T9S5 1454 aa14.39□□□□□ -0.11
MDC1-201ENST00000376406 RGL3Q3MIN7 710 aa14.38□□□□□ -0.11
MDC1-201ENST00000376406 SUPT16HQ9Y5B9 1047 aaKnown RBP14.38□□□□□ -0.11
MDC1-201ENST00000376406 A0A0G2JS52 829 aa14.37□□□□□ -0.11
MDC1-201ENST00000376406 BECN1Q14457 450 aa14.37□□□□□ -0.11
MDC1-201ENST00000376406 RAPGEF2Q9Y4G8 1499 aa14.35□□□□□ -0.11
MDC1-201ENST00000376406 NUDCQ9Y266 331 aa14.34□□□□□ -0.11
MDC1-201ENST00000376406 CCER2I3L3R5 266 aa14.34□□□□□ -0.11
MDC1-201ENST00000376406 PPP4R2Q9NY27 417 aa14.34□□□□□ -0.11
MDC1-201ENST00000376406 PRDM2Q13029 1718 aa14.31□□□□□ -0.12
MDC1-201ENST00000376406 ZBTB7CA1YPR0 619 aa14.31□□□□□ -0.12
MDC1-201ENST00000376406 CHMP4BQ9H444 224 aaKnown RBP14.31□□□□□ -0.12
MDC1-201ENST00000376406 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
MDC1-201ENST00000376406 TDRD9Q8NDG6 1382 aaKnown RBP14.29□□□□□ -0.12
MDC1-201ENST00000376406 RAB3GAP2Q9H2M9 1393 aa14.29□□□□□ -0.12
MDC1-201ENST00000376406 KANK4Q5T7N3 995 aaPredicted RBP14.28□□□□□ -0.12
MDC1-201ENST00000376406 ANKRD30AQ9BXX3 1397 aa14.28□□□□□ -0.12
MDC1-201ENST00000376406 ANP32EQ9BTT0 268 aa14.27□□□□□ -0.12
MDC1-201ENST00000376406 EID1Q9Y6B2 187 aa14.26□□□□□ -0.13
MDC1-201ENST00000376406 TMF1P82094 1093 aa14.25□□□□□ -0.13
MDC1-201ENST00000376406 MAPK8IP3Q9UPT6 1336 aa14.25□□□□□ -0.13
MDC1-201ENST00000376406 FTSJ3Q8IY81 847 aaKnown RBP14.24□□□□□ -0.13
MDC1-201ENST00000376406 JPH4Q96JJ6 628 aa14.24□□□□□ -0.13
MDC1-201ENST00000376406 CHMP4AQ9BY43 222 aa14.24□□□□□ -0.13
MDC1-201ENST00000376406 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
MDC1-201ENST00000376406 GAPVD1Q14C86 1478 aa14.23□□□□□ -0.13
MDC1-201ENST00000376406 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
MDC1-201ENST00000376406 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
MDC1-201ENST00000376406 GLIPR1L2Q4G1C9 344 aa14.22□□□□□ -0.13
MDC1-201ENST00000376406 LMOD2Q6P5Q4 547 aa14.22□□□□□ -0.13
MDC1-201ENST00000376406 NCAPD3P42695 1498 aa14.22□□□□□ -0.13
MDC1-201ENST00000376406 MS4A1P11836 297 aa14.22□□□□□ -0.13
MDC1-201ENST00000376406 MLECQ14165 292 aa14.22□□□□□ -0.13
MDC1-201ENST00000376406 HSPA5P11021 654 aaKnown RBP14.22□□□□□ -0.13
MDC1-201ENST00000376406 CASC1Q6TDU7 716 aa14.21□□□□□ -0.13
MDC1-201ENST00000376406 PPM1GO15355 546 aaPredicted RBP14.2□□□□□ -0.14
MDC1-201ENST00000376406 CC2D2AQ9P2K1 1620 aa14.2□□□□□ -0.14
MDC1-201ENST00000376406 ARXQ96QS3 562 aa14.2□□□□□ -0.14
MDC1-201ENST00000376406 NPHP1O15259 732 aa14.19□□□□□ -0.14
MDC1-201ENST00000376406 GOLGA6L22H0YM25 854 aa14.19□□□□□ -0.14
MDC1-201ENST00000376406 GGT6Q6P531 493 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms