RNA–Protein interactions for RNA: ENST00000375633.5

C6orf48-201, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-201ENST00000375633 ABCC8Q09428 1581 aa13.52□□□□□ -0.25
C6orf48-201ENST00000375633 CUX1P39880 1505 aa13.51□□□□□ -0.25
C6orf48-201ENST00000375633 EVX2Q03828 476 aa13.47□□□□□ -0.25
C6orf48-201ENST00000375633 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
C6orf48-201ENST00000375633 FGD5Q6ZNL6 1462 aa13.46□□□□□ -0.25
C6orf48-201ENST00000375633 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.25
C6orf48-201ENST00000375633 WRNQ14191 1432 aaPredicted RBP eCLIP13.46□□□□□ -0.269e-10■□□□□ 10.9
C6orf48-201ENST00000375633 POLA1P09884 1462 aaPredicted RBP13.45□□□□□ -0.26
C6orf48-201ENST00000375633 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
C6orf48-201ENST00000375633 SOGA1O94964 1423 aa13.43□□□□□ -0.26
C6orf48-201ENST00000375633 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
C6orf48-201ENST00000375633 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
C6orf48-201ENST00000375633 ATF5Q9Y2D1 282 aaPredicted RBP13.39□□□□□ -0.27
C6orf48-201ENST00000375633 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
C6orf48-201ENST00000375633 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
C6orf48-201ENST00000375633 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.273e-13■■■■■ 31.4
C6orf48-201ENST00000375633 TDRD9Q8NDG6 1382 aaKnown RBP13.38□□□□□ -0.27
C6orf48-201ENST00000375633 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
C6orf48-201ENST00000375633 EIF4G3O43432 1585 aaKnown RBP13.32□□□□□ -0.28
C6orf48-201ENST00000375633 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
C6orf48-201ENST00000375633 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
C6orf48-201ENST00000375633 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
C6orf48-201ENST00000375633 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
C6orf48-201ENST00000375633 FBLN2P98095 1184 aa13.25□□□□□ -0.29
C6orf48-201ENST00000375633 GRIN2BQ13224 1484 aa13.22□□□□□ -0.29
C6orf48-201ENST00000375633 SNAPC4Q5SXM2 1469 aa13.22□□□□□ -0.29
C6orf48-201ENST00000375633 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.29
C6orf48-201ENST00000375633 LHX8Q68G74 356 aa13.21□□□□□ -0.29
C6orf48-201ENST00000375633 PBRM1Q86U86 1689 aa13.2□□□□□ -0.3
C6orf48-201ENST00000375633 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
C6orf48-201ENST00000375633 C19orf67A6NJJ6 358 aa13.17□□□□□ -0.3
C6orf48-201ENST00000375633 RUSC2Q8N2Y8 1516 aa13.17□□□□□ -0.3
C6orf48-201ENST00000375633 KIF27Q86VH2 1401 aa13.16□□□□□ -0.3
C6orf48-201ENST00000375633 PRKAR2AP13861 404 aaKnown RBP13.16□□□□□ -0.3
C6orf48-201ENST00000375633 DNAJC5Q9H3Z4 198 aa13.16□□□□□ -0.3
C6orf48-201ENST00000375633 CHD1O14646 1710 aa13.15□□□□□ -0.3
C6orf48-201ENST00000375633 MAGI1Q96QZ7 1491 aaPredicted RBP13.14□□□□□ -0.31
C6orf48-201ENST00000375633 GABBR2O75899 941 aa13.13□□□□□ -0.31
C6orf48-201ENST00000375633 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
C6orf48-201ENST00000375633 IGF1RP08069 1367 aa13.12□□□□□ -0.31
C6orf48-201ENST00000375633 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
C6orf48-201ENST00000375633 SYNJ2O15056 1496 aa13.11□□□□□ -0.31
C6orf48-201ENST00000375633 ERICH3Q5RHP9 1530 aa13.11□□□□□ -0.31
C6orf48-201ENST00000375633 SPDYE2BA6NHP3 402 aa13.1□□□□□ -0.31
C6orf48-201ENST00000375633 SPDYE6P0CI01 402 aa13.1□□□□□ -0.31
C6orf48-201ENST00000375633 SPDYE2Q495Y8 402 aa13.1□□□□□ -0.31
C6orf48-201ENST00000375633 ADAMTS12P58397 1594 aa13.1□□□□□ -0.31
C6orf48-201ENST00000375633 FHAD1B1AJZ9 1412 aa13.08□□□□□ -0.32
C6orf48-201ENST00000375633 GRIN2AQ12879 1464 aa13.06□□□□□ -0.32
C6orf48-201ENST00000375633 CARMIL1Q5VZK9 1371 aa13.05□□□□□ -0.32
C6orf48-201ENST00000375633 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
C6orf48-201ENST00000375633 CUL7Q14999 1698 aa13.01□□□□□ -0.33
C6orf48-201ENST00000375633 CEP170Q5SW79 1584 aa13□□□□□ -0.33
C6orf48-201ENST00000375633 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
C6orf48-201ENST00000375633 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
C6orf48-201ENST00000375633 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
C6orf48-201ENST00000375633 CLASP1Q7Z460 1538 aa12.98□□□□□ -0.33
C6orf48-201ENST00000375633 NUP160Q12769 1436 aa12.97□□□□□ -0.33
C6orf48-201ENST00000375633 RAPGEF2Q9Y4G8 1499 aa12.96□□□□□ -0.34
C6orf48-201ENST00000375633 EEA1Q15075 1411 aa12.93□□□□□ -0.34
C6orf48-201ENST00000375633 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
C6orf48-201ENST00000375633 RIMBP3CA6NJZ7 1639 aa12.92□□□□□ -0.34
C6orf48-201ENST00000375633 RIMBP3BA6NNM3 1639 aa12.92□□□□□ -0.34
C6orf48-201ENST00000375633 RIMBP3Q9UFD9 1639 aa12.92□□□□□ -0.34
C6orf48-201ENST00000375633 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
C6orf48-201ENST00000375633 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
C6orf48-201ENST00000375633 JPH4Q96JJ6 628 aa12.9□□□□□ -0.34
C6orf48-201ENST00000375633 CYB5RLQ6IPT4 315 aa12.89□□□□□ -0.35
C6orf48-201ENST00000375633 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
C6orf48-201ENST00000375633 ERCC6L2Q5T890 1561 aa12.89□□□□□ -0.35
C6orf48-201ENST00000375633 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
C6orf48-201ENST00000375633 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
C6orf48-201ENST00000375633 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
C6orf48-201ENST00000375633 TTBK1Q5TCY1 1321 aaPredicted RBP12.87□□□□□ -0.35
C6orf48-201ENST00000375633 SSUH2Q9Y2M2 353 aa12.86□□□□□ -0.35
C6orf48-201ENST00000375633 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
C6orf48-201ENST00000375633 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
C6orf48-201ENST00000375633 ARAP1Q96P48 1450 aa12.84□□□□□ -0.35
C6orf48-201ENST00000375633 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
C6orf48-201ENST00000375633 IQGAP2Q13576 1575 aa12.83□□□□□ -0.36
C6orf48-201ENST00000375633 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
C6orf48-201ENST00000375633 UBTFP17480 764 aaKnown RBP12.83□□□□□ -0.36
C6orf48-201ENST00000375633 KIF21BO75037 1637 aa12.8□□□□□ -0.36
C6orf48-201ENST00000375633 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
C6orf48-201ENST00000375633 P3H3Q8IVL6 736 aa12.79□□□□□ -0.36
C6orf48-201ENST00000375633 ZNF692Q9BU19 519 aaPredicted RBP12.79□□□□□ -0.36
C6orf48-201ENST00000375633 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
C6orf48-201ENST00000375633 MKRN4PQ13434 485 aaPredicted RBP12.75□□□□□ -0.37
C6orf48-201ENST00000375633 CARMIL2Q6F5E8 1435 aa12.75□□□□□ -0.37
C6orf48-201ENST00000375633 DISP1Q96F81 1524 aa12.75□□□□□ -0.37
C6orf48-201ENST00000375633 UGGT2Q9NYU1 1516 aa12.75□□□□□ -0.37
C6orf48-201ENST00000375633 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
C6orf48-201ENST00000375633 PTPRGP23470 1445 aa12.72□□□□□ -0.37
C6orf48-201ENST00000375633 CLCN6P51797 869 aa12.72□□□□□ -0.37
C6orf48-201ENST00000375633 TNIKQ9UKE5 1360 aa12.71□□□□□ -0.37
C6orf48-201ENST00000375633 KIAA0556O60303 1618 aa12.71□□□□□ -0.37
C6orf48-201ENST00000375633 ZBTB22O15209 634 aa12.71□□□□□ -0.37
C6orf48-201ENST00000375633 CD44P16070 742 aaKnown RBP12.71□□□□□ -0.37
C6orf48-201ENST00000375633 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
C6orf48-201ENST00000375633 FHOD3Q2V2M9 1422 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms