RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 KIF21BO75037 1637 aa19.01■□□□□ 0.63
MCF2L-204ENST00000375608 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
MCF2L-204ENST00000375608 MRS2Q9HD23 443 aa18.95■□□□□ 0.62
MCF2L-204ENST00000375608 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
MCF2L-204ENST00000375608 RRP7BPQ9NSQ0 103 aa18.95■□□□□ 0.62
MCF2L-204ENST00000375608 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
MCF2L-204ENST00000375608 NPM2Q86SE8 214 aaKnown RBP18.94■□□□□ 0.62
MCF2L-204ENST00000375608 SETD5Q9C0A6 1442 aa18.94■□□□□ 0.62
MCF2L-204ENST00000375608 RTL5Q5HYW3 569 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-204ENST00000375608 SALL2Q9Y467 1007 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-204ENST00000375608 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
MCF2L-204ENST00000375608 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
MCF2L-204ENST00000375608 CCER2I3L3R5 266 aa18.89■□□□□ 0.62
MCF2L-204ENST00000375608 ARAP1Q96P48 1450 aa18.88■□□□□ 0.61
MCF2L-204ENST00000375608 PRKCSHP14314 528 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-204ENST00000375608 MSH5O43196 834 aa18.87■□□□□ 0.61
MCF2L-204ENST00000375608 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
MCF2L-204ENST00000375608 DEKP35659 375 aaKnown RBP18.81■□□□□ 0.6
MCF2L-204ENST00000375608 FOXD1Q16676 465 aa18.81■□□□□ 0.6
MCF2L-204ENST00000375608 PPP4R2Q9NY27 417 aa18.8■□□□□ 0.6
MCF2L-204ENST00000375608 EIF4G2P78344 907 aaKnown RBP eCLIP18.8■□□□□ 0.6
MCF2L-204ENST00000375608 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
MCF2L-204ENST00000375608 ANP32AP39687 249 aaKnown RBP18.79■□□□□ 0.6
MCF2L-204ENST00000375608 MTUS2Q5JR59 1369 aa18.78■□□□□ 0.6
MCF2L-204ENST00000375608 WDR97A6NE52 1622 aa18.76■□□□□ 0.59
MCF2L-204ENST00000375608 RTN4Q9NQC3 1192 aaKnown RBP18.75■□□□□ 0.59
MCF2L-204ENST00000375608 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
MCF2L-204ENST00000375608 CUX2O14529 1486 aa18.74■□□□□ 0.59
MCF2L-204ENST00000375608 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
MCF2L-204ENST00000375608 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
MCF2L-204ENST00000375608 CARMIL1Q5VZK9 1371 aa18.72■□□□□ 0.59
MCF2L-204ENST00000375608 CCDC184Q52MB2 194 aa18.72■□□□□ 0.59
MCF2L-204ENST00000375608 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
MCF2L-204ENST00000375608 NOP58Q9Y2X3 529 aaKnown RBP18.69■□□□□ 0.58
MCF2L-204ENST00000375608 TIMELESSQ9UNS1 1208 aa18.69■□□□□ 0.58
MCF2L-204ENST00000375608 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
MCF2L-204ENST00000375608 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
MCF2L-204ENST00000375608 LAS1LQ9Y4W2 734 aaKnown RBP18.64■□□□□ 0.57
MCF2L-204ENST00000375608 BICRAQ9NZM4 1560 aa18.63■□□□□ 0.57
MCF2L-204ENST00000375608 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
MCF2L-204ENST00000375608 DAXXQ9UER7 740 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-204ENST00000375608 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-204ENST00000375608 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
MCF2L-204ENST00000375608 FANCIQ9NVI1 1328 aa18.61■□□□□ 0.57
MCF2L-204ENST00000375608 L3MBTL2Q969R5 705 aa18.59■□□□□ 0.57
MCF2L-204ENST00000375608 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-204ENST00000375608 WASHC2AQ641Q2 1341 aa18.58■□□□□ 0.56
MCF2L-204ENST00000375608 SLC4A1APQ9BWU0 796 aaKnown RBP18.57■□□□□ 0.56
MCF2L-204ENST00000375608 KDM2AQ9Y2K7 1162 aa18.57■□□□□ 0.56
MCF2L-204ENST00000375608 UNC13AQ9UPW8 1703 aa18.56■□□□□ 0.56
MCF2L-204ENST00000375608 IGF1RP08069 1367 aa18.55■□□□□ 0.56
MCF2L-204ENST00000375608 FHAD1B1AJZ9 1412 aa18.55■□□□□ 0.56
MCF2L-204ENST00000375608 MAPKBP1O60336 1514 aa18.54■□□□□ 0.56
MCF2L-204ENST00000375608 PRKRIP1Q9H875 184 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-204ENST00000375608 MYT1LQ9UL68 1186 aa18.54■□□□□ 0.56
MCF2L-204ENST00000375608 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.56
MCF2L-204ENST00000375608 EIF5BO60841 1220 aaKnown RBP18.49■□□□□ 0.55
MCF2L-204ENST00000375608 MPHOSPH9Q99550 1183 aa18.48■□□□□ 0.55
MCF2L-204ENST00000375608 CCDC18Q5T9S5 1454 aa18.46■□□□□ 0.55
MCF2L-204ENST00000375608 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-204ENST00000375608 NEFMP07197 916 aa18.46■□□□□ 0.55
MCF2L-204ENST00000375608 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.54
MCF2L-204ENST00000375608 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
MCF2L-204ENST00000375608 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-204ENST00000375608 CUX1P39880 1505 aa18.42■□□□□ 0.54
MCF2L-204ENST00000375608 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
MCF2L-204ENST00000375608 IPO9Q96P70 1041 aaKnown RBP18.41■□□□□ 0.54
MCF2L-204ENST00000375608 ZBED9Q6R2W3 1325 aa18.38■□□□□ 0.53
MCF2L-204ENST00000375608 AKNAQ7Z591 1439 aa18.38■□□□□ 0.53
MCF2L-204ENST00000375608 ANO8Q9HCE9 1232 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-204ENST00000375608 TIAM1Q13009 1591 aa18.37■□□□□ 0.53
MCF2L-204ENST00000375608 NUDCQ9Y266 331 aa18.36■□□□□ 0.53
MCF2L-204ENST00000375608 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
MCF2L-204ENST00000375608 FMN1Q68DA7 1419 aa18.36■□□□□ 0.53
MCF2L-204ENST00000375608 FGD6Q6ZV73 1430 aa18.35■□□□□ 0.53
MCF2L-204ENST00000375608 ARXQ96QS3 562 aa18.35■□□□□ 0.53
MCF2L-204ENST00000375608 FBLN2P98095 1184 aa18.35■□□□□ 0.53
MCF2L-204ENST00000375608 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
MCF2L-204ENST00000375608 NBPF8Q3BBV2 869 aa18.34■□□□□ 0.53
MCF2L-204ENST00000375608 CARD11Q9BXL7 1154 aa18.33■□□□□ 0.53
MCF2L-204ENST00000375608 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.52
MCF2L-204ENST00000375608 IL27Q8NEV9 243 aa18.33■□□□□ 0.52
MCF2L-204ENST00000375608 RGL3Q3MIN7 710 aa18.32■□□□□ 0.52
MCF2L-204ENST00000375608 UACAQ9BZF9 1416 aa18.32■□□□□ 0.52
MCF2L-204ENST00000375608 EXOC6Q8TAG9 804 aa18.32■□□□□ 0.52
MCF2L-204ENST00000375608 SLC4A3P48751 1232 aa18.31■□□□□ 0.52
MCF2L-204ENST00000375608 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
MCF2L-204ENST00000375608 PLIN1O60240 522 aa18.3■□□□□ 0.52
MCF2L-204ENST00000375608 SKAP1Q86WV1 359 aa18.28■□□□□ 0.52
MCF2L-204ENST00000375608 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
MCF2L-204ENST00000375608 RAD54L2Q9Y4B4 1467 aa18.27■□□□□ 0.52
MCF2L-204ENST00000375608 CC2D1BQ5T0F9 858 aaKnown RBP18.27■□□□□ 0.52
MCF2L-204ENST00000375608 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.52
MCF2L-204ENST00000375608 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-204ENST00000375608 RGS3P49796 1198 aa18.24■□□□□ 0.51
MCF2L-204ENST00000375608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.517e-7■■□□□ 14.1
MCF2L-204ENST00000375608 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
MCF2L-204ENST00000375608 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
MCF2L-204ENST00000375608 NCAPD3P42695 1498 aa18.24■□□□□ 0.51
MCF2L-204ENST00000375608 CADPSQ9ULU8 1353 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms