RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SIN3AQ96ST3 1273 aa24.86■■□□□ 1.57
RXRB-201ENST00000374680 PHLDB1Q86UU1 1377 aa24.86■■□□□ 1.57
RXRB-201ENST00000374680 RAB3GAP2Q9H2M9 1393 aa24.85■■□□□ 1.57
RXRB-201ENST00000374680 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.57
RXRB-201ENST00000374680 ARID3CA6NKF2 412 aa24.82■■□□□ 1.56
RXRB-201ENST00000374680 TOPBP1Q92547 1522 aa24.8■■□□□ 1.56
RXRB-201ENST00000374680 HIRIP3Q9BW71 556 aaPredicted RBP24.77■■□□□ 1.56
RXRB-201ENST00000374680 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
RXRB-201ENST00000374680 CLSPNQ9HAW4 1339 aa24.75■■□□□ 1.55
RXRB-201ENST00000374680 LRRC9Q6ZRR7 1453 aa24.75■■□□□ 1.55
RXRB-201ENST00000374680 TIAM1Q13009 1591 aa24.73■■□□□ 1.55
RXRB-201ENST00000374680 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
RXRB-201ENST00000374680 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
RXRB-201ENST00000374680 DNMBPQ6XZF7 1577 aa24.68■■□□□ 1.54
RXRB-201ENST00000374680 SETD5Q9C0A6 1442 aa24.66■■□□□ 1.54
RXRB-201ENST00000374680 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
RXRB-201ENST00000374680 URB2Q14146 1524 aaKnown RBP24.65■■□□□ 1.54
RXRB-201ENST00000374680 PCF11O94913 1555 aaKnown RBP24.65■■□□□ 1.54
RXRB-201ENST00000374680 KCNH8Q96L42 1107 aa24.62■■□□□ 1.53
RXRB-201ENST00000374680 MTUS2Q5JR59 1369 aa24.6■■□□□ 1.53
RXRB-201ENST00000374680 DDX10Q13206 875 aaKnown RBP24.58■■□□□ 1.53
RXRB-201ENST00000374680 CHIC2Q9UKJ5 165 aa24.58■■□□□ 1.53
RXRB-201ENST00000374680 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
RXRB-201ENST00000374680 MAPKBP1O60336 1514 aa24.51■■□□□ 1.51
RXRB-201ENST00000374680 PDS5BQ9NTI5 1447 aa24.5■■□□□ 1.51
RXRB-201ENST00000374680 RRP7BPQ9NSQ0 103 aa24.49■■□□□ 1.51
RXRB-201ENST00000374680 CASKIN1Q8WXD9 1431 aa24.49■■□□□ 1.51
RXRB-201ENST00000374680 MAP3K1Q13233 1512 aa24.47■■□□□ 1.51
RXRB-201ENST00000374680 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.514e-8■■■□□ 14.7
RXRB-201ENST00000374680 FMN1Q68DA7 1419 aa24.45■■□□□ 1.5
RXRB-201ENST00000374680 FYCO1Q9BQS8 1478 aa24.43■■□□□ 1.5
RXRB-201ENST00000374680 LAMC3Q9Y6N6 1575 aa24.4■■□□□ 1.5
RXRB-201ENST00000374680 TRIM52Q96A61 297 aa24.39■■□□□ 1.5
RXRB-201ENST00000374680 WDR97A6NE52 1622 aa24.39■■□□□ 1.5
RXRB-201ENST00000374680 FGD6Q6ZV73 1430 aa24.39■■□□□ 1.5
RXRB-201ENST00000374680 PTPRKQ15262 1439 aa24.39■■□□□ 1.49
RXRB-201ENST00000374680 CUL7Q14999 1698 aa24.35■■□□□ 1.49
RXRB-201ENST00000374680 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
RXRB-201ENST00000374680 EFCAB5A4FU69 1503 aa24.35■■□□□ 1.49
RXRB-201ENST00000374680 FBLN2P98095 1184 aa24.34■■□□□ 1.49
RXRB-201ENST00000374680 CFAP43Q8NDM7 1665 aa24.34■■□□□ 1.49
RXRB-201ENST00000374680 SNAPC4Q5SXM2 1469 aa24.33■■□□□ 1.48
RXRB-201ENST00000374680 KIF21AQ7Z4S6 1674 aa24.32■■□□□ 1.48
RXRB-201ENST00000374680 CTTNBP2Q8WZ74 1663 aa24.31■■□□□ 1.48
RXRB-201ENST00000374680 TONSLQ96HA7 1378 aa24.3■■□□□ 1.48
RXRB-201ENST00000374680 FOXD1Q16676 465 aa24.3■■□□□ 1.48
RXRB-201ENST00000374680 NCOA2Q15596 1464 aa24.3■■□□□ 1.48
RXRB-201ENST00000374680 CCDC18Q5T9S5 1454 aa24.25■■□□□ 1.47
RXRB-201ENST00000374680 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
RXRB-201ENST00000374680 MYOM3Q5VTT5 1437 aa24.22■■□□□ 1.47
RXRB-201ENST00000374680 BCANQ96GW7 911 aa24.21■■□□□ 1.47
RXRB-201ENST00000374680 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.46
RXRB-201ENST00000374680 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
RXRB-201ENST00000374680 ZNF644Q9H582 1327 aaPredicted RBP24.18■■□□□ 1.46
RXRB-201ENST00000374680 SUPT16HQ9Y5B9 1047 aaKnown RBP24.18■■□□□ 1.46
RXRB-201ENST00000374680 CDK13Q14004 1512 aaKnown RBP24.17■■□□□ 1.46
RXRB-201ENST00000374680 NAIPQ13075 1403 aa24.17■■□□□ 1.46
RXRB-201ENST00000374680 MAGI3Q5TCQ9 1506 aa24.16■■□□□ 1.46
RXRB-201ENST00000374680 LRRIQ1Q96JM4 1722 aa24.15■■□□□ 1.46
RXRB-201ENST00000374680 ZNF777Q9ULD5 760 aaPredicted RBP24.14■■□□□ 1.45
RXRB-201ENST00000374680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.13■■□□□ 1.45
RXRB-201ENST00000374680 SAMD9Q5K651 1589 aa24.13■■□□□ 1.45
RXRB-201ENST00000374680 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
RXRB-201ENST00000374680 ANP32CO43423 234 aa24.13■■□□□ 1.45
RXRB-201ENST00000374680 HFM1A2PYH4 1435 aa24.13■■□□□ 1.45
RXRB-201ENST00000374680 TIMELESSQ9UNS1 1208 aa24.11■■□□□ 1.45
RXRB-201ENST00000374680 UACAQ9BZF9 1416 aa24.1■■□□□ 1.45
RXRB-201ENST00000374680 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
RXRB-201ENST00000374680 CNGB1Q14028 1251 aaPredicted RBP24.08■■□□□ 1.45
RXRB-201ENST00000374680 MPHOSPH9Q99550 1183 aa24.06■■□□□ 1.44
RXRB-201ENST00000374680 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
RXRB-201ENST00000374680 PTPN23Q9H3S7 1636 aa24.05■■□□□ 1.44
RXRB-201ENST00000374680 EPRSP07814 1512 aaKnown RBP24.05■■□□□ 1.44
RXRB-201ENST00000374680 SUPT6HQ7KZ85 1726 aaKnown RBP24.04■■□□□ 1.44
RXRB-201ENST00000374680 IQGAP2Q13576 1575 aa24.03■■□□□ 1.44
RXRB-201ENST00000374680 EHBP1L1Q8N3D4 1523 aa24.02■■□□□ 1.44
RXRB-201ENST00000374680 HSPA5P11021 654 aaKnown RBP24■■□□□ 1.43
RXRB-201ENST00000374680 FKBP8Q14318 412 aa24■■□□□ 1.43
RXRB-201ENST00000374680 L3MBTL2Q969R5 705 aa24■■□□□ 1.43
RXRB-201ENST00000374680 UGGT2Q9NYU1 1516 aa23.99■■□□□ 1.43
RXRB-201ENST00000374680 THOC2Q8NI27 1593 aaKnown RBP23.98■■□□□ 1.43
RXRB-201ENST00000374680 ERCC6Q03468 1493 aa23.97■■□□□ 1.43
RXRB-201ENST00000374680 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
RXRB-201ENST00000374680 SLC4A1APQ9BWU0 796 aaKnown RBP23.96■■□□□ 1.43
RXRB-201ENST00000374680 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.42
RXRB-201ENST00000374680 KDM6BO15054 1643 aa23.94■■□□□ 1.42
RXRB-201ENST00000374680 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
RXRB-201ENST00000374680 POLR3GLQ9BT43 218 aa23.93■■□□□ 1.42
RXRB-201ENST00000374680 CFDP1Q9UEE9 299 aaPredicted RBP23.93■■□□□ 1.42
RXRB-201ENST00000374680 CDK11AQ9UQ88 783 aaPredicted RBP23.92■■□□□ 1.42
RXRB-201ENST00000374680 HECW1Q76N89 1606 aa23.9■■□□□ 1.42
RXRB-201ENST00000374680 PRG4Q92954 1404 aaPredicted RBP23.9■■□□□ 1.42
RXRB-201ENST00000374680 IFT140Q96RY7 1462 aa23.88■■□□□ 1.41
RXRB-201ENST00000374680 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
RXRB-201ENST00000374680 WASHC2AQ641Q2 1341 aa23.87■■□□□ 1.41
RXRB-201ENST00000374680 EIF4G2P78344 907 aaKnown RBP eCLIP23.87■■□□□ 1.41
RXRB-201ENST00000374680 C11orf95C9JLR9 678 aaPredicted RBP23.86■■□□□ 1.41
RXRB-201ENST00000374680 DENND4BO75064 1496 aaPredicted RBP23.85■■□□□ 1.41
RXRB-201ENST00000374680 NBPF8Q3BBV2 869 aa23.85■■□□□ 1.41
RXRB-201ENST00000374680 HNRNPUQ00839 825 aaKnown RBP eCLIP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms