RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 MAP3K1Q13233 1512 aa11.97□□□□□ -0.49
GARNL3-201ENST00000373386 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
GARNL3-201ENST00000373386 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
GARNL3-201ENST00000373386 PDE4CQ08493 712 aa11.92□□□□□ -0.5
GARNL3-201ENST00000373386 CUX2O14529 1486 aa11.91□□□□□ -0.5
GARNL3-201ENST00000373386 RRBP1Q9P2E9 1410 aaKnown RBP11.9□□□□□ -0.5
GARNL3-201ENST00000373386 HOMEZQ8IX15 550 aa11.9□□□□□ -0.5
GARNL3-201ENST00000373386 ERICH6BQ5W0A0 696 aa11.89□□□□□ -0.51
GARNL3-201ENST00000373386 ARHGAP35Q9NRY4 1499 aa11.88□□□□□ -0.51
GARNL3-201ENST00000373386 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-201ENST00000373386 DNMBPQ6XZF7 1577 aa11.87□□□□□ -0.51
GARNL3-201ENST00000373386 IGF1RP08069 1367 aa11.86□□□□□ -0.51
GARNL3-201ENST00000373386 FGD5Q6ZNL6 1462 aa11.85□□□□□ -0.51
GARNL3-201ENST00000373386 SALL2Q9Y467 1007 aaPredicted RBP11.84□□□□□ -0.51
GARNL3-201ENST00000373386 TULP1O00294 542 aaPredicted RBP11.84□□□□□ -0.51
GARNL3-201ENST00000373386 CUL7Q14999 1698 aa11.84□□□□□ -0.51
GARNL3-201ENST00000373386 ABCA10Q8WWZ4 1543 aa11.83□□□□□ -0.52
GARNL3-201ENST00000373386 CFAP43Q8NDM7 1665 aa11.82□□□□□ -0.52
GARNL3-201ENST00000373386 TIAM1Q13009 1591 aa11.81□□□□□ -0.52
GARNL3-201ENST00000373386 EFCAB5A4FU69 1503 aa11.81□□□□□ -0.52
GARNL3-201ENST00000373386 LAMC3Q9Y6N6 1575 aa11.81□□□□□ -0.52
GARNL3-201ENST00000373386 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
GARNL3-201ENST00000373386 WDR97A6NE52 1622 aa11.8□□□□□ -0.52
GARNL3-201ENST00000373386 CARMIL1Q5VZK9 1371 aa11.78□□□□□ -0.52
GARNL3-201ENST00000373386 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
GARNL3-201ENST00000373386 CCDC136Q96JN2 1154 aa11.78□□□□□ -0.52
GARNL3-201ENST00000373386 AQRO60306 1485 aaKnown RBP eCLIP11.78□□□□□ -0.52
GARNL3-201ENST00000373386 NESP48681 1621 aa11.77□□□□□ -0.53
GARNL3-201ENST00000373386 CTTNBP2Q8WZ74 1663 aa11.76□□□□□ -0.53
GARNL3-201ENST00000373386 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
GARNL3-201ENST00000373386 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
GARNL3-201ENST00000373386 DHX57Q6P158 1386 aaKnown RBP11.75□□□□□ -0.53
GARNL3-201ENST00000373386 CCNB3Q8WWL7 1395 aa11.75□□□□□ -0.53
GARNL3-201ENST00000373386 AEBP2Q6ZN18 517 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-201ENST00000373386 POLA1P09884 1462 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-201ENST00000373386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.73□□□□□ -0.53
GARNL3-201ENST00000373386 LRRC9Q6ZRR7 1453 aa11.73□□□□□ -0.53
GARNL3-201ENST00000373386 FYCO1Q9BQS8 1478 aa11.73□□□□□ -0.53
GARNL3-201ENST00000373386 HNRNPUL2Q1KMD3 747 aaKnown RBP11.72□□□□□ -0.53
GARNL3-201ENST00000373386 FGD1P98174 961 aa11.71□□□□□ -0.53
GARNL3-201ENST00000373386 TAF7LQ5H9L4 462 aa11.71□□□□□ -0.53
GARNL3-201ENST00000373386 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.53
GARNL3-201ENST00000373386 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.53
GARNL3-201ENST00000373386 KIF21AQ7Z4S6 1674 aa11.7□□□□□ -0.54
GARNL3-201ENST00000373386 AMER1Q5JTC6 1135 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-201ENST00000373386 THOC2Q8NI27 1593 aaKnown RBP11.69□□□□□ -0.54
GARNL3-201ENST00000373386 PCF11O94913 1555 aaKnown RBP11.69□□□□□ -0.54
GARNL3-201ENST00000373386 CASKIN1Q8WXD9 1431 aa11.68□□□□□ -0.54
GARNL3-201ENST00000373386 MIER1Q8N108 512 aa11.68□□□□□ -0.54
GARNL3-201ENST00000373386 SAMD9Q5K651 1589 aa11.68□□□□□ -0.54
GARNL3-201ENST00000373386 YTHDC1Q96MU7 727 aaKnown RBP11.67□□□□□ -0.54
GARNL3-201ENST00000373386 BCL11BQ9C0K0 894 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-201ENST00000373386 FMN1Q68DA7 1419 aa11.64□□□□□ -0.55
GARNL3-201ENST00000373386 URB2Q14146 1524 aaKnown RBP11.64□□□□□ -0.55
GARNL3-201ENST00000373386 NPM2Q86SE8 214 aaKnown RBP11.63□□□□□ -0.55
GARNL3-201ENST00000373386 PDS5BQ9NTI5 1447 aa11.63□□□□□ -0.55
GARNL3-201ENST00000373386 RAD54L2Q9Y4B4 1467 aa11.62□□□□□ -0.55
GARNL3-201ENST00000373386 SNAPC4Q5SXM2 1469 aa11.61□□□□□ -0.55
GARNL3-201ENST00000373386 SETD5Q9C0A6 1442 aa11.61□□□□□ -0.55
GARNL3-201ENST00000373386 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
GARNL3-201ENST00000373386 GLIPR1L2Q4G1C9 344 aa11.6□□□□□ -0.55
GARNL3-201ENST00000373386 TSHZ2Q9NRE2 1034 aa11.6□□□□□ -0.55
GARNL3-201ENST00000373386 TARBP1Q13395 1621 aaKnown RBP11.59□□□□□ -0.55
GARNL3-201ENST00000373386 PHLDB1Q86UU1 1377 aa11.58□□□□□ -0.56
GARNL3-201ENST00000373386 RAB3GAP2Q9H2M9 1393 aa11.57□□□□□ -0.56
GARNL3-201ENST00000373386 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
GARNL3-201ENST00000373386 A0A0U1RQG5 324 aaPredicted RBP11.56□□□□□ -0.56
GARNL3-201ENST00000373386 AAMPQ13685 434 aa11.55□□□□□ -0.56
GARNL3-201ENST00000373386 GRIN2BQ13224 1484 aa11.55□□□□□ -0.56
GARNL3-201ENST00000373386 PBRM1Q86U86 1689 aa11.54□□□□□ -0.56
GARNL3-201ENST00000373386 FHOD3Q2V2M9 1422 aa11.54□□□□□ -0.56
GARNL3-201ENST00000373386 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.54□□□□□ -0.56
GARNL3-201ENST00000373386 ARHGEF11O15085 1522 aa11.54□□□□□ -0.56
GARNL3-201ENST00000373386 EHBP1L1Q8N3D4 1523 aa11.54□□□□□ -0.56
GARNL3-201ENST00000373386 LRRIQ1Q96JM4 1722 aa11.54□□□□□ -0.56
GARNL3-201ENST00000373386 CCDC18Q5T9S5 1454 aa11.53□□□□□ -0.56
GARNL3-201ENST00000373386 SUPT6HQ7KZ85 1726 aaKnown RBP11.53□□□□□ -0.56
GARNL3-201ENST00000373386 BRD2P25440 801 aaKnown RBP11.52□□□□□ -0.56
GARNL3-201ENST00000373386 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.57
GARNL3-201ENST00000373386 FGD6Q6ZV73 1430 aa11.51□□□□□ -0.57
GARNL3-201ENST00000373386 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
GARNL3-201ENST00000373386 C14orf37Q86TY3 774 aa11.5□□□□□ -0.57
GARNL3-201ENST00000373386 TAOK2Q9UL54 1235 aa11.5□□□□□ -0.57
GARNL3-201ENST00000373386 HECW1Q76N89 1606 aa11.49□□□□□ -0.57
GARNL3-201ENST00000373386 HFM1A2PYH4 1435 aa11.48□□□□□ -0.57
GARNL3-201ENST00000373386 UGGT2Q9NYU1 1516 aa11.48□□□□□ -0.57
GARNL3-201ENST00000373386 DEKP35659 375 aaKnown RBP11.48□□□□□ -0.57
GARNL3-201ENST00000373386 AKNAQ7Z591 1439 aa11.48□□□□□ -0.57
GARNL3-201ENST00000373386 TCOF1Q13428 1488 aaKnown RBP11.48□□□□□ -0.57
GARNL3-201ENST00000373386 MYOM3Q5VTT5 1437 aa11.47□□□□□ -0.57
GARNL3-201ENST00000373386 IQGAP2Q13576 1575 aa11.46□□□□□ -0.57
GARNL3-201ENST00000373386 MRC2Q9UBG0 1479 aa11.46□□□□□ -0.57
GARNL3-201ENST00000373386 RBM10P98175 930 aaKnown RBP11.46□□□□□ -0.57
GARNL3-201ENST00000373386 ZMYND15Q9H091 742 aa11.46□□□□□ -0.57
GARNL3-201ENST00000373386 PTPN23Q9H3S7 1636 aa11.46□□□□□ -0.57
GARNL3-201ENST00000373386 GCC2Q8IWJ2 1684 aa11.45□□□□□ -0.58
GARNL3-201ENST00000373386 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
GARNL3-201ENST00000373386 DHX37Q8IY37 1157 aaKnown RBP11.45□□□□□ -0.58
GARNL3-201ENST00000373386 NCOA2Q15596 1464 aa11.45□□□□□ -0.58
GARNL3-201ENST00000373386 UACAQ9BZF9 1416 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms