RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 CDK11AQ9UQ88 783 aaPredicted RBP9.23□□□□□ -0.93
CHD6-203ENST00000373233 NESP48681 1621 aa9.23□□□□□ -0.93
CHD6-203ENST00000373233 DNMBPQ6XZF7 1577 aa9.22□□□□□ -0.93
CHD6-203ENST00000373233 ARID3CA6NKF2 412 aa9.21□□□□□ -0.93
CHD6-203ENST00000373233 LAMC3Q9Y6N6 1575 aa9.2□□□□□ -0.94
CHD6-203ENST00000373233 ANP32AP39687 249 aaKnown RBP9.19□□□□□ -0.94
CHD6-203ENST00000373233 CHMP7Q8WUX9 453 aaPredicted RBP9.19□□□□□ -0.94
CHD6-203ENST00000373233 VPS8Q8N3P4 1428 aa9.19□□□□□ -0.94
CHD6-203ENST00000373233 ERICH3Q5RHP9 1530 aa9.18□□□□□ -0.94
CHD6-203ENST00000373233 RAD54L2Q9Y4B4 1467 aa9.18□□□□□ -0.94
CHD6-203ENST00000373233 TOPBP1Q92547 1522 aa9.17□□□□□ -0.94
CHD6-203ENST00000373233 TDRD9Q8NDG6 1382 aaKnown RBP9.16□□□□□ -0.94
CHD6-203ENST00000373233 KIF21AQ7Z4S6 1674 aa9.15□□□□□ -0.94
CHD6-203ENST00000373233 FHAD1B1AJZ9 1412 aa9.15□□□□□ -0.94
CHD6-203ENST00000373233 MRC2Q9UBG0 1479 aa9.15□□□□□ -0.95
CHD6-203ENST00000373233 SLC24A1O60721 1099 aa9.15□□□□□ -0.95
CHD6-203ENST00000373233 NBR1Q14596 966 aa9.14□□□□□ -0.95
CHD6-203ENST00000373233 GAPVD1Q14C86 1478 aa9.13□□□□□ -0.95
CHD6-203ENST00000373233 MTUS2Q5JR59 1369 aa9.13□□□□□ -0.95
CHD6-203ENST00000373233 CUL7Q14999 1698 aa9.11□□□□□ -0.95
CHD6-203ENST00000373233 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
CHD6-203ENST00000373233 POLA1P09884 1462 aaPredicted RBP9.1□□□□□ -0.95
CHD6-203ENST00000373233 NEUROD1Q13562 356 aa9.1□□□□□ -0.95
CHD6-203ENST00000373233 TRIM52Q96A61 297 aa9.08□□□□□ -0.96
CHD6-203ENST00000373233 IGF1RP08069 1367 aa9.08□□□□□ -0.96
CHD6-203ENST00000373233 FHOD3Q2V2M9 1422 aa9.07□□□□□ -0.96
CHD6-203ENST00000373233 FMN1Q68DA7 1419 aa9.07□□□□□ -0.96
CHD6-203ENST00000373233 ABCA10Q8WWZ4 1543 aa9.06□□□□□ -0.96
CHD6-203ENST00000373233 CTTNBP2Q8WZ74 1663 aa9.05□□□□□ -0.96
CHD6-203ENST00000373233 TNNT2P45379 298 aaPredicted RBP9.05□□□□□ -0.96
CHD6-203ENST00000373233 ZNF777Q9ULD5 760 aaPredicted RBP9.04□□□□□ -0.96
CHD6-203ENST00000373233 IFT140Q96RY7 1462 aa9.04□□□□□ -0.96
CHD6-203ENST00000373233 URB2Q14146 1524 aaKnown RBP9.04□□□□□ -0.96
CHD6-203ENST00000373233 ARHGAP35Q9NRY4 1499 aa9.04□□□□□ -0.96
CHD6-203ENST00000373233 PRXQ9BXM0 1461 aa9.04□□□□□ -0.96
CHD6-203ENST00000373233 AQRO60306 1485 aaKnown RBP eCLIP9.03□□□□□ -0.964e-7■■■■■ 33.8
CHD6-203ENST00000373233 RTN4Q9NQC3 1192 aaKnown RBP9.03□□□□□ -0.96
CHD6-203ENST00000373233 PBRM1Q86U86 1689 aa9.03□□□□□ -0.96
CHD6-203ENST00000373233 GRIN2BQ13224 1484 aa9.02□□□□□ -0.97
CHD6-203ENST00000373233 ARAP1Q96P48 1450 aa9.02□□□□□ -0.97
CHD6-203ENST00000373233 EFCAB5A4FU69 1503 aa9.02□□□□□ -0.97
CHD6-203ENST00000373233 ANP32BQ92688 251 aaKnown RBP9.02□□□□□ -0.97
CHD6-203ENST00000373233 CCNB3Q8WWL7 1395 aa9.01□□□□□ -0.97
CHD6-203ENST00000373233 NPM2Q86SE8 214 aaKnown RBP9.01□□□□□ -0.97
CHD6-203ENST00000373233 CARMIL2Q6F5E8 1435 aa9□□□□□ -0.97
CHD6-203ENST00000373233 CDK11BP21127 795 aaKnown RBP9□□□□□ -0.97
CHD6-203ENST00000373233 KANK4Q5T7N3 995 aaPredicted RBP8.99□□□□□ -0.97
CHD6-203ENST00000373233 DNAJC5BQ9UF47 199 aa8.99□□□□□ -0.97
CHD6-203ENST00000373233 NEFMP07197 916 aa8.97□□□□□ -0.97
CHD6-203ENST00000373233 CHIC2Q9UKJ5 165 aa8.96□□□□□ -0.97
CHD6-203ENST00000373233 FYCO1Q9BQS8 1478 aa8.96□□□□□ -0.98
CHD6-203ENST00000373233 IQGAP2Q13576 1575 aa8.96□□□□□ -0.98
CHD6-203ENST00000373233 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.96□□□□□ -0.98
CHD6-203ENST00000373233 SNAPC4Q5SXM2 1469 aa8.95□□□□□ -0.98
CHD6-203ENST00000373233 HECW1Q76N89 1606 aa8.95□□□□□ -0.98
CHD6-203ENST00000373233 PLEKHD1A6NEE1 506 aa8.95□□□□□ -0.98
CHD6-203ENST00000373233 NAP1L5Q96NT1 182 aaPredicted RBP8.94□□□□□ -0.98
CHD6-203ENST00000373233 PCF11O94913 1555 aaKnown RBP8.94□□□□□ -0.98
CHD6-203ENST00000373233 CASKIN1Q8WXD9 1431 aa8.94□□□□□ -0.98
CHD6-203ENST00000373233 FKBP8Q14318 412 aa8.93□□□□□ -0.98
CHD6-203ENST00000373233 CCDC18Q5T9S5 1454 aa8.93□□□□□ -0.98
CHD6-203ENST00000373233 ERICH6BQ5W0A0 696 aa8.93□□□□□ -0.98
CHD6-203ENST00000373233 TIAM1Q13009 1591 aa8.93□□□□□ -0.98
CHD6-203ENST00000373233 POLR3GLQ9BT43 218 aa8.92□□□□□ -0.98
CHD6-203ENST00000373233 RRP7BPQ9NSQ0 103 aa8.92□□□□□ -0.98
CHD6-203ENST00000373233 TONSLQ96HA7 1378 aa8.92□□□□□ -0.98
CHD6-203ENST00000373233 NPM1P06748 294 aaKnown RBP eCLIP8.92□□□□□ -0.98
CHD6-203ENST00000373233 SUPT6HQ7KZ85 1726 aaKnown RBP8.92□□□□□ -0.98
CHD6-203ENST00000373233 DEKP35659 375 aaKnown RBP8.91□□□□□ -0.98
CHD6-203ENST00000373233 ARXQ96QS3 562 aa8.91□□□□□ -0.98
CHD6-203ENST00000373233 ABCA5Q8WWZ7 1642 aa8.91□□□□□ -0.98
CHD6-203ENST00000373233 ZNF326Q5BKZ1 582 aaKnown RBP8.91□□□□□ -0.98
CHD6-203ENST00000373233 ADAMTS12P58397 1594 aa8.91□□□□□ -0.98
CHD6-203ENST00000373233 WDR62O43379 1518 aa8.91□□□□□ -0.98
CHD6-203ENST00000373233 CFDP1Q9UEE9 299 aaPredicted RBP8.9□□□□□ -0.98
CHD6-203ENST00000373233 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
CHD6-203ENST00000373233 LRRC9Q6ZRR7 1453 aa8.9□□□□□ -0.99
CHD6-203ENST00000373233 SETD5Q9C0A6 1442 aa8.89□□□□□ -0.99
CHD6-203ENST00000373233 WDR97A6NE52 1622 aa8.89□□□□□ -0.99
CHD6-203ENST00000373233 NCLP19338 710 aaKnown RBP8.89□□□□□ -0.99
CHD6-203ENST00000373233 CCDC136Q96JN2 1154 aa8.89□□□□□ -0.99
CHD6-203ENST00000373233 KCNH8Q96L42 1107 aa8.89□□□□□ -0.99
CHD6-203ENST00000373233 MAGI1Q96QZ7 1491 aaPredicted RBP8.88□□□□□ -0.99
CHD6-203ENST00000373233 CFAP43Q8NDM7 1665 aa8.88□□□□□ -0.99
CHD6-203ENST00000373233 EHBP1L1Q8N3D4 1523 aa8.88□□□□□ -0.99
CHD6-203ENST00000373233 EIF4G3O43432 1585 aaKnown RBP8.87□□□□□ -0.99
CHD6-203ENST00000373233 TSPY4P0CV99 314 aa8.86□□□□□ -0.99
CHD6-203ENST00000373233 TSPY10P0CW01 314 aa8.86□□□□□ -0.99
CHD6-203ENST00000373233 AMER1Q5JTC6 1135 aaPredicted RBP8.86□□□□□ -0.99
CHD6-203ENST00000373233 ANP32CO43423 234 aa8.86□□□□□ -0.99
CHD6-203ENST00000373233 PKNOX2Q96KN3 472 aa8.86□□□□□ -0.99
CHD6-203ENST00000373233 ZNF608Q9ULD9 1512 aaPredicted RBP8.85□□□□□ -0.99
CHD6-203ENST00000373233 GRIN2AQ12879 1464 aa8.85□□□□□ -0.99
CHD6-203ENST00000373233 SYNJ2O15056 1496 aa8.85□□□□□ -0.99
CHD6-203ENST00000373233 TARBP1Q13395 1621 aaKnown RBP8.85□□□□□ -0.99
CHD6-203ENST00000373233 JPH4Q96JJ6 628 aa8.85□□□□□ -0.99
CHD6-203ENST00000373233 TRIM44Q96DX7 344 aaPredicted RBP8.85□□□□□ -0.99
CHD6-203ENST00000373233 PODXL2Q9NZ53 605 aa8.85□□□□□ -0.99
CHD6-203ENST00000373233 RAB3GAP2Q9H2M9 1393 aa8.84□□□□□ -0.99
CHD6-203ENST00000373233 KIAA0586Q9BVV6 1533 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms