RNA–Protein interactions for RNA: ENST00000372059.6

AMMECR1-203, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

TSL 1 (best) BASIC

Gene AMMECR1, Length 3,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-203ENST00000372059 TOP2BQ02880 1626 aa20.39■□□□□ 0.85
AMMECR1-203ENST00000372059 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
AMMECR1-203ENST00000372059 SIN3AQ96ST3 1273 aa20.37■□□□□ 0.85
AMMECR1-203ENST00000372059 DNAJC5BQ9UF47 199 aa20.37■□□□□ 0.85
AMMECR1-203ENST00000372059 CCER2I3L3R5 266 aa20.35■□□□□ 0.85
AMMECR1-203ENST00000372059 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
AMMECR1-203ENST00000372059 ERICH6Q7L0X2 663 aa20.31■□□□□ 0.84
AMMECR1-203ENST00000372059 ANP32CO43423 234 aa20.3■□□□□ 0.84
AMMECR1-203ENST00000372059 IRX6P78412 446 aaPredicted RBP20.3■□□□□ 0.84
AMMECR1-203ENST00000372059 CFTRP13569 1480 aa20.29■□□□□ 0.84
AMMECR1-203ENST00000372059 PRKCSHP14314 528 aaPredicted RBP20.29■□□□□ 0.84
AMMECR1-203ENST00000372059 PRXQ9BXM0 1461 aa20.29■□□□□ 0.84
AMMECR1-203ENST00000372059 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
AMMECR1-203ENST00000372059 CDK11AQ9UQ88 783 aaPredicted RBP20.27■□□□□ 0.84
AMMECR1-203ENST00000372059 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
AMMECR1-203ENST00000372059 CADPSQ9ULU8 1353 aa20.25■□□□□ 0.83
AMMECR1-203ENST00000372059 SETD5Q9C0A6 1442 aa20.23■□□□□ 0.83
AMMECR1-203ENST00000372059 NESP48681 1621 aa20.23■□□□□ 0.83
AMMECR1-203ENST00000372059 DEKP35659 375 aaKnown RBP20.21■□□□□ 0.83
AMMECR1-203ENST00000372059 BIVM-ERCC5R4GMW8 1640 aa20.2■□□□□ 0.82
AMMECR1-203ENST00000372059 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
AMMECR1-203ENST00000372059 IGF1RP08069 1367 aa20.19■□□□□ 0.82
AMMECR1-203ENST00000372059 CC2D2AQ9P2K1 1620 aa20.18■□□□□ 0.82
AMMECR1-203ENST00000372059 FGD5Q6ZNL6 1462 aa20.17■□□□□ 0.82
AMMECR1-203ENST00000372059 ARHGAP35Q9NRY4 1499 aa20.17■□□□□ 0.82
AMMECR1-203ENST00000372059 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
AMMECR1-203ENST00000372059 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
AMMECR1-203ENST00000372059 HNRNPUQ00839 825 aaKnown RBP eCLIP20.16■□□□□ 0.82
AMMECR1-203ENST00000372059 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
AMMECR1-203ENST00000372059 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
AMMECR1-203ENST00000372059 MYT1LQ9UL68 1186 aa20.11■□□□□ 0.81
AMMECR1-203ENST00000372059 FANCD2Q9BXW9 1451 aa20.09■□□□□ 0.81
AMMECR1-203ENST00000372059 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.8
AMMECR1-203ENST00000372059 TDRD9Q8NDG6 1382 aaKnown RBP20.05■□□□□ 0.8
AMMECR1-203ENST00000372059 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
AMMECR1-203ENST00000372059 TIAM1Q13009 1591 aa20.03■□□□□ 0.8
AMMECR1-203ENST00000372059 NBR1Q14596 966 aa20.02■□□□□ 0.8
AMMECR1-203ENST00000372059 B4GALNT3Q6L9W6 998 aa20.01■□□□□ 0.79
AMMECR1-203ENST00000372059 FHOD3Q2V2M9 1422 aa20.01■□□□□ 0.79
AMMECR1-203ENST00000372059 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
AMMECR1-203ENST00000372059 ERICH6BQ5W0A0 696 aa19.99■□□□□ 0.79
AMMECR1-203ENST00000372059 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
AMMECR1-203ENST00000372059 ANO8Q9HCE9 1232 aaPredicted RBP19.98■□□□□ 0.79
AMMECR1-203ENST00000372059 NOP58Q9Y2X3 529 aaKnown RBP19.97■□□□□ 0.79
AMMECR1-203ENST00000372059 TONSLQ96HA7 1378 aa19.95■□□□□ 0.78
AMMECR1-203ENST00000372059 CCDC184Q52MB2 194 aa19.94■□□□□ 0.78
AMMECR1-203ENST00000372059 MAP3K1Q13233 1512 aa19.94■□□□□ 0.78
AMMECR1-203ENST00000372059 POLA1P09884 1462 aaPredicted RBP19.91■□□□□ 0.78
AMMECR1-203ENST00000372059 TOPBP1Q92547 1522 aa19.87■□□□□ 0.77
AMMECR1-203ENST00000372059 WASHC2AQ641Q2 1341 aa19.87■□□□□ 0.77
AMMECR1-203ENST00000372059 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
AMMECR1-203ENST00000372059 FHAD1B1AJZ9 1412 aa19.82■□□□□ 0.76
AMMECR1-203ENST00000372059 FAM9BQ8IZU0 186 aa19.82■□□□□ 0.76
AMMECR1-203ENST00000372059 KDM5BQ9UGL1 1544 aa19.8■□□□□ 0.76
AMMECR1-203ENST00000372059 HSPA5P11021 654 aaKnown RBP19.8■□□□□ 0.76
AMMECR1-203ENST00000372059 CHIC2Q9UKJ5 165 aa19.79■□□□□ 0.76
AMMECR1-203ENST00000372059 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
AMMECR1-203ENST00000372059 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.75
AMMECR1-203ENST00000372059 IL27Q8NEV9 243 aa19.76■□□□□ 0.75
AMMECR1-203ENST00000372059 ZBED9Q6R2W3 1325 aa19.76■□□□□ 0.75
AMMECR1-203ENST00000372059 IPO9Q96P70 1041 aaKnown RBP19.75■□□□□ 0.75
AMMECR1-203ENST00000372059 CFAP43Q8NDM7 1665 aa19.75■□□□□ 0.75
AMMECR1-203ENST00000372059 PCF11O94913 1555 aaKnown RBP19.75■□□□□ 0.75
AMMECR1-203ENST00000372059 UACAQ9BZF9 1416 aa19.74■□□□□ 0.75
AMMECR1-203ENST00000372059 MTUS2Q5JR59 1369 aa19.74■□□□□ 0.75
AMMECR1-203ENST00000372059 DNMBPQ6XZF7 1577 aa19.73■□□□□ 0.75
AMMECR1-203ENST00000372059 PRKRIP1Q9H875 184 aaPredicted RBP19.73■□□□□ 0.75
AMMECR1-203ENST00000372059 PRDM2Q13029 1718 aa19.72■□□□□ 0.75
AMMECR1-203ENST00000372059 MRS2Q9HD23 443 aa19.72■□□□□ 0.75
AMMECR1-203ENST00000372059 PTPRKQ15262 1439 aa19.72■□□□□ 0.75
AMMECR1-203ENST00000372059 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.72■□□□□ 0.75
AMMECR1-203ENST00000372059 CNTLNQ9NXG0 1405 aa19.71■□□□□ 0.75
AMMECR1-203ENST00000372059 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.75
AMMECR1-203ENST00000372059 FBLN2P98095 1184 aa19.71■□□□□ 0.75
AMMECR1-203ENST00000372059 RTL5Q5HYW3 569 aaPredicted RBP19.71■□□□□ 0.75
AMMECR1-203ENST00000372059 C11orf95C9JLR9 678 aaPredicted RBP19.71■□□□□ 0.75
AMMECR1-203ENST00000372059 ANP32AP39687 249 aaKnown RBP19.7■□□□□ 0.74
AMMECR1-203ENST00000372059 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
AMMECR1-203ENST00000372059 ABCA10Q8WWZ4 1543 aa19.69■□□□□ 0.74
AMMECR1-203ENST00000372059 CCDC136Q96JN2 1154 aa19.69■□□□□ 0.74
AMMECR1-203ENST00000372059 RTN4Q9NQC3 1192 aaKnown RBP19.69■□□□□ 0.74
AMMECR1-203ENST00000372059 RRP7BPQ9NSQ0 103 aa19.69■□□□□ 0.74
AMMECR1-203ENST00000372059 ZBTB47Q9UFB7 747 aaPredicted RBP19.69■□□□□ 0.74
AMMECR1-203ENST00000372059 AKNAQ7Z591 1439 aa19.68■□□□□ 0.74
AMMECR1-203ENST00000372059 HFM1A2PYH4 1435 aa19.67■□□□□ 0.74
AMMECR1-203ENST00000372059 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
AMMECR1-203ENST00000372059 FGD6Q6ZV73 1430 aa19.66■□□□□ 0.74
AMMECR1-203ENST00000372059 EIF4G2P78344 907 aaKnown RBP eCLIP19.65■□□□□ 0.74
AMMECR1-203ENST00000372059 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
AMMECR1-203ENST00000372059 PDS5BQ9NTI5 1447 aa19.63■□□□□ 0.73
AMMECR1-203ENST00000372059 NAIPQ13075 1403 aa19.63■□□□□ 0.73
AMMECR1-203ENST00000372059 CCDC7Q96M83 1385 aa19.6■□□□□ 0.73
AMMECR1-203ENST00000372059 NCOA1Q15788 1441 aa19.58■□□□□ 0.73
AMMECR1-203ENST00000372059 SMG6Q86US8 1419 aaKnown RBP19.58■□□□□ 0.73
AMMECR1-203ENST00000372059 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.57■□□□□ 0.72
AMMECR1-203ENST00000372059 RNF123Q5XPI4 1314 aa19.57■□□□□ 0.72
AMMECR1-203ENST00000372059 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
AMMECR1-203ENST00000372059 FOXD1Q16676 465 aa19.57■□□□□ 0.72
AMMECR1-203ENST00000372059 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
AMMECR1-203ENST00000372059 DENND4BO75064 1496 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms