RNA–Protein interactions for RNA: ENST00000372059.6

AMMECR1-203, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

TSL 1 (best) BASIC

Gene AMMECR1, Length 3,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-203ENST00000372059 NISCHQ9Y2I1 1504 aa28.05■■■□□ 2.08
AMMECR1-203ENST00000372059 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
AMMECR1-203ENST00000372059 HRCP23327 699 aa24.54■■□□□ 1.52
AMMECR1-203ENST00000372059 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
AMMECR1-203ENST00000372059 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
AMMECR1-203ENST00000372059 PPARGC1BQ86YN6 1023 aaKnown RBP24.11■■□□□ 1.45
AMMECR1-203ENST00000372059 MYO15BQ96JP2 1530 aa24.07■■□□□ 1.44
AMMECR1-203ENST00000372059 PCGF6Q9BYE7 350 aa24.07■■□□□ 1.44
AMMECR1-203ENST00000372059 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
AMMECR1-203ENST00000372059 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
AMMECR1-203ENST00000372059 CCDC180Q9P1Z9 1646 aa23.5■■□□□ 1.35
AMMECR1-203ENST00000372059 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
AMMECR1-203ENST00000372059 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
AMMECR1-203ENST00000372059 LOC105371045A0A1W2PR82 267 aa23.35■■□□□ 1.33
AMMECR1-203ENST00000372059 TRIM26Q12899 539 aaPredicted RBP23.26■■□□□ 1.31
AMMECR1-203ENST00000372059 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
AMMECR1-203ENST00000372059 ZEB1P37275 1124 aaPredicted RBP22.99■■□□□ 1.27
AMMECR1-203ENST00000372059 ABCC9O60706 1549 aa22.8■■□□□ 1.24
AMMECR1-203ENST00000372059 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
AMMECR1-203ENST00000372059 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
AMMECR1-203ENST00000372059 ACIN1Q9UKV3 1341 aaKnown RBP22.63■■□□□ 1.21
AMMECR1-203ENST00000372059 NEUROD1Q13562 356 aa22.61■■□□□ 1.21
AMMECR1-203ENST00000372059 FAM9AQ8IZU1 332 aaPredicted RBP22.54■■□□□ 1.2
AMMECR1-203ENST00000372059 MYT1Q01538 1121 aa22.52■■□□□ 1.2
AMMECR1-203ENST00000372059 GTF3C3Q9Y5Q9 886 aa22.46■■□□□ 1.19
AMMECR1-203ENST00000372059 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
AMMECR1-203ENST00000372059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.32■■□□□ 1.16
AMMECR1-203ENST00000372059 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
AMMECR1-203ENST00000372059 CENPBP07199 599 aaPredicted RBP22.26■■□□□ 1.15
AMMECR1-203ENST00000372059 DIEXFQ68CQ4 756 aaKnown RBP22.25■■□□□ 1.15
AMMECR1-203ENST00000372059 CCER1Q8TC90 406 aaPredicted RBP22.22■■□□□ 1.15
AMMECR1-203ENST00000372059 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
AMMECR1-203ENST00000372059 RB1CC1Q8TDY2 1594 aa22.11■■□□□ 1.13
AMMECR1-203ENST00000372059 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.12
AMMECR1-203ENST00000372059 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
AMMECR1-203ENST00000372059 NACADO15069 1562 aa21.95■■□□□ 1.1
AMMECR1-203ENST00000372059 YTHDC1Q96MU7 727 aaKnown RBP21.91■■□□□ 1.1
AMMECR1-203ENST00000372059 WIZO95785 1651 aa21.86■■□□□ 1.09
AMMECR1-203ENST00000372059 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
AMMECR1-203ENST00000372059 ZNF316A6NFI3 1004 aaPredicted RBP21.82■■□□□ 1.08
AMMECR1-203ENST00000372059 MIER1Q8N108 512 aa21.73■■□□□ 1.07
AMMECR1-203ENST00000372059 WRNQ14191 1432 aaPredicted RBP eCLIP21.61■■□□□ 1.05
AMMECR1-203ENST00000372059 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
AMMECR1-203ENST00000372059 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
AMMECR1-203ENST00000372059 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
AMMECR1-203ENST00000372059 RANGAP1P46060 587 aaPredicted RBP21.48■■□□□ 1.03
AMMECR1-203ENST00000372059 CCDC88BA6NC98 1476 aa21.42■■□□□ 1.02
AMMECR1-203ENST00000372059 EIF4G1Q04637 1599 aaKnown RBP21.39■■□□□ 1.01
AMMECR1-203ENST00000372059 SUPT16HQ9Y5B9 1047 aaKnown RBP21.39■■□□□ 1.01
AMMECR1-203ENST00000372059 UBTFP17480 764 aaKnown RBP21.39■■□□□ 1.01
AMMECR1-203ENST00000372059 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
AMMECR1-203ENST00000372059 SMARCA4P51532 1647 aa21.36■■□□□ 1.01
AMMECR1-203ENST00000372059 TNIKQ9UKE5 1360 aa21.34■■□□□ 1.01
AMMECR1-203ENST00000372059 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
AMMECR1-203ENST00000372059 SOGA1O94964 1423 aa21.31■■□□□ 1
AMMECR1-203ENST00000372059 TSHZ2Q9NRE2 1034 aa21.3■■□□□ 1
AMMECR1-203ENST00000372059 ANP32EQ9BTT0 268 aa21.29■■□□□ 1
AMMECR1-203ENST00000372059 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
AMMECR1-203ENST00000372059 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
AMMECR1-203ENST00000372059 BCL11AQ9H165 835 aa21.25■□□□□ 0.99
AMMECR1-203ENST00000372059 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
AMMECR1-203ENST00000372059 CLSPNQ9HAW4 1339 aa21.22■□□□□ 0.99
AMMECR1-203ENST00000372059 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
AMMECR1-203ENST00000372059 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
AMMECR1-203ENST00000372059 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
AMMECR1-203ENST00000372059 EEA1Q15075 1411 aa21.04■□□□□ 0.96
AMMECR1-203ENST00000372059 BAZ1BQ9UIG0 1483 aaKnown RBP20.99■□□□□ 0.95
AMMECR1-203ENST00000372059 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
AMMECR1-203ENST00000372059 BCANQ96GW7 911 aa20.94■□□□□ 0.94
AMMECR1-203ENST00000372059 KCNH8Q96L42 1107 aa20.94■□□□□ 0.94
AMMECR1-203ENST00000372059 DHX57Q6P158 1386 aaKnown RBP20.93■□□□□ 0.94
AMMECR1-203ENST00000372059 CLIP1P30622 1438 aa20.92■□□□□ 0.94
AMMECR1-203ENST00000372059 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.93
AMMECR1-203ENST00000372059 APLP2Q06481 763 aa20.84■□□□□ 0.93
AMMECR1-203ENST00000372059 SYNJ1O43426 1573 aa20.84■□□□□ 0.93
AMMECR1-203ENST00000372059 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
AMMECR1-203ENST00000372059 FKBP8Q14318 412 aa20.81■□□□□ 0.92
AMMECR1-203ENST00000372059 RBM19Q9Y4C8 960 aaKnown RBP20.79■□□□□ 0.92
AMMECR1-203ENST00000372059 KIF21BO75037 1637 aa20.75■□□□□ 0.91
AMMECR1-203ENST00000372059 RAPGEF2Q9Y4G8 1499 aa20.71■□□□□ 0.91
AMMECR1-203ENST00000372059 PEG3Q9GZU2 1588 aa20.65■□□□□ 0.9
AMMECR1-203ENST00000372059 MSH5O43196 834 aa20.65■□□□□ 0.9
AMMECR1-203ENST00000372059 ITGAEP38570 1179 aa20.65■□□□□ 0.9
AMMECR1-203ENST00000372059 KANK4Q5T7N3 995 aaPredicted RBP20.63■□□□□ 0.89
AMMECR1-203ENST00000372059 DDX10Q13206 875 aaKnown RBP20.57■□□□□ 0.88
AMMECR1-203ENST00000372059 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
AMMECR1-203ENST00000372059 NEFLP07196 543 aa20.55■□□□□ 0.88
AMMECR1-203ENST00000372059 P3H3Q8IVL6 736 aa20.52■□□□□ 0.88
AMMECR1-203ENST00000372059 TRIM52Q96A61 297 aa20.52■□□□□ 0.88
AMMECR1-203ENST00000372059 RRBP1Q9P2E9 1410 aaKnown RBP20.52■□□□□ 0.87
AMMECR1-203ENST00000372059 CUX2O14529 1486 aa20.51■□□□□ 0.87
AMMECR1-203ENST00000372059 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
AMMECR1-203ENST00000372059 MAPKBP1O60336 1514 aa20.45■□□□□ 0.86
AMMECR1-203ENST00000372059 PPP1R15AO75807 674 aaPredicted RBP20.45■□□□□ 0.86
AMMECR1-203ENST00000372059 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
AMMECR1-203ENST00000372059 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
AMMECR1-203ENST00000372059 CUX1P39880 1505 aa20.42■□□□□ 0.86
AMMECR1-203ENST00000372059 RAB3GAP2Q9H2M9 1393 aa20.41■□□□□ 0.86
AMMECR1-203ENST00000372059 WDR97A6NE52 1622 aa20.4■□□□□ 0.86
AMMECR1-203ENST00000372059 HIRIP3Q9BW71 556 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms