RNA–Protein interactions for RNA: ENST00000371828.7

STAU1-206, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-206ENST00000371828 EEA1Q15075 1411 aa14.32□□□□□ -0.12
STAU1-206ENST00000371828 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.122e-7■■■■■ 31.4
STAU1-206ENST00000371828 ERCC6Q03468 1493 aa14.3□□□□□ -0.12
STAU1-206ENST00000371828 CLSPNQ9HAW4 1339 aa14.29□□□□□ -0.12
STAU1-206ENST00000371828 POLA1P09884 1462 aaPredicted RBP14.29□□□□□ -0.12
STAU1-206ENST00000371828 TOPBP1Q92547 1522 aa14.27□□□□□ -0.12
STAU1-206ENST00000371828 URB2Q14146 1524 aaKnown RBP14.27□□□□□ -0.13
STAU1-206ENST00000371828 FHOD3Q2V2M9 1422 aa14.24□□□□□ -0.13
STAU1-206ENST00000371828 ARAP1Q96P48 1450 aa14.24□□□□□ -0.13
STAU1-206ENST00000371828 RBM19Q9Y4C8 960 aaKnown RBP14.23□□□□□ -0.13
STAU1-206ENST00000371828 PDS5BQ9NTI5 1447 aa14.23□□□□□ -0.13
STAU1-206ENST00000371828 KIF21AQ7Z4S6 1674 aa14.22□□□□□ -0.13
STAU1-206ENST00000371828 BIVM-ERCC5R4GMW8 1640 aa14.21□□□□□ -0.13
STAU1-206ENST00000371828 KIF21BO75037 1637 aa14.2□□□□□ -0.14
STAU1-206ENST00000371828 NEFLP07196 543 aa14.2□□□□□ -0.14
STAU1-206ENST00000371828 PRXQ9BXM0 1461 aa14.19□□□□□ -0.14
STAU1-206ENST00000371828 VPS8Q8N3P4 1428 aa14.19□□□□□ -0.14
STAU1-206ENST00000371828 ERICH6Q7L0X2 663 aa14.19□□□□□ -0.14
STAU1-206ENST00000371828 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
STAU1-206ENST00000371828 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
STAU1-206ENST00000371828 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
STAU1-206ENST00000371828 TRIM52Q96A61 297 aa14.15□□□□□ -0.14
STAU1-206ENST00000371828 ARHGAP35Q9NRY4 1499 aa14.14□□□□□ -0.15
STAU1-206ENST00000371828 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
STAU1-206ENST00000371828 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
STAU1-206ENST00000371828 PRKCSHP14314 528 aaPredicted RBP14.09□□□□□ -0.15
STAU1-206ENST00000371828 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
STAU1-206ENST00000371828 MSH5O43196 834 aa14.09□□□□□ -0.15
STAU1-206ENST00000371828 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
STAU1-206ENST00000371828 IRX6P78412 446 aaPredicted RBP14.07□□□□□ -0.16
STAU1-206ENST00000371828 HIRIP3Q9BW71 556 aaPredicted RBP14.06□□□□□ -0.16
STAU1-206ENST00000371828 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
STAU1-206ENST00000371828 DHX57Q6P158 1386 aaKnown RBP14.04□□□□□ -0.16
STAU1-206ENST00000371828 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
STAU1-206ENST00000371828 RRP7BPQ9NSQ0 103 aa14.01□□□□□ -0.17
STAU1-206ENST00000371828 ABCA10Q8WWZ4 1543 aa14.01□□□□□ -0.17
STAU1-206ENST00000371828 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
STAU1-206ENST00000371828 SIN3AQ96ST3 1273 aa13.98□□□□□ -0.17
STAU1-206ENST00000371828 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
STAU1-206ENST00000371828 ERICH3Q5RHP9 1530 aa13.97□□□□□ -0.17
STAU1-206ENST00000371828 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
STAU1-206ENST00000371828 CNGB1Q14028 1251 aaPredicted RBP13.95□□□□□ -0.18
STAU1-206ENST00000371828 NBR1Q14596 966 aa13.94□□□□□ -0.18
STAU1-206ENST00000371828 CDK11AQ9UQ88 783 aaPredicted RBP13.93□□□□□ -0.18
STAU1-206ENST00000371828 SNAPC4Q5SXM2 1469 aa13.93□□□□□ -0.18
STAU1-206ENST00000371828 FOXD1Q16676 465 aa13.93□□□□□ -0.18
STAU1-206ENST00000371828 DEKP35659 375 aaKnown RBP13.92□□□□□ -0.18
STAU1-206ENST00000371828 ZNF644Q9H582 1327 aaPredicted RBP13.92□□□□□ -0.18
STAU1-206ENST00000371828 CCNB3Q8WWL7 1395 aa13.91□□□□□ -0.18
STAU1-206ENST00000371828 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
STAU1-206ENST00000371828 PCF11O94913 1555 aaKnown RBP13.89□□□□□ -0.19
STAU1-206ENST00000371828 ANP32CO43423 234 aa13.88□□□□□ -0.19
STAU1-206ENST00000371828 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
STAU1-206ENST00000371828 CDK13Q14004 1512 aaKnown RBP13.85□□□□□ -0.19
STAU1-206ENST00000371828 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
STAU1-206ENST00000371828 TARBP1Q13395 1621 aaKnown RBP13.84□□□□□ -0.19
STAU1-206ENST00000371828 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
STAU1-206ENST00000371828 RAB3GAP2Q9H2M9 1393 aa13.82□□□□□ -0.2
STAU1-206ENST00000371828 LRRC9Q6ZRR7 1453 aa13.81□□□□□ -0.2
STAU1-206ENST00000371828 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
STAU1-206ENST00000371828 FANCIQ9NVI1 1328 aa13.81□□□□□ -0.2
STAU1-206ENST00000371828 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
STAU1-206ENST00000371828 RTN4Q9NQC3 1192 aaKnown RBP13.8□□□□□ -0.2
STAU1-206ENST00000371828 ABCA5Q8WWZ7 1642 aa13.8□□□□□ -0.2
STAU1-206ENST00000371828 CCDC136Q96JN2 1154 aa13.79□□□□□ -0.2
STAU1-206ENST00000371828 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
STAU1-206ENST00000371828 ZNF326Q5BKZ1 582 aaKnown RBP13.78□□□□□ -0.2
STAU1-206ENST00000371828 EIF4G3O43432 1585 aaKnown RBP13.78□□□□□ -0.2
STAU1-206ENST00000371828 IFT140Q96RY7 1462 aa13.77□□□□□ -0.2
STAU1-206ENST00000371828 TIAM1Q13009 1591 aa13.77□□□□□ -0.21
STAU1-206ENST00000371828 PLB1Q6P1J6 1458 aa13.77□□□□□ -0.21
STAU1-206ENST00000371828 B4GALNT3Q6L9W6 998 aa13.76□□□□□ -0.21
STAU1-206ENST00000371828 PBRM1Q86U86 1689 aa13.76□□□□□ -0.21
STAU1-206ENST00000371828 FMN1Q68DA7 1419 aa13.75□□□□□ -0.21
STAU1-206ENST00000371828 PPP1R15AO75807 674 aaPredicted RBP13.74□□□□□ -0.21
STAU1-206ENST00000371828 SALL2Q9Y467 1007 aaPredicted RBP13.74□□□□□ -0.21
STAU1-206ENST00000371828 POLR3GLQ9BT43 218 aa13.73□□□□□ -0.21
STAU1-206ENST00000371828 CUL7Q14999 1698 aa13.73□□□□□ -0.21
STAU1-206ENST00000371828 WDR97A6NE52 1622 aa13.73□□□□□ -0.21
STAU1-206ENST00000371828 CTTNBP2Q8WZ74 1663 aa13.73□□□□□ -0.21
STAU1-206ENST00000371828 PRG4Q92954 1404 aaPredicted RBP13.72□□□□□ -0.21
STAU1-206ENST00000371828 CFDP1Q9UEE9 299 aaPredicted RBP13.72□□□□□ -0.21
STAU1-206ENST00000371828 GRIN2AQ12879 1464 aa13.71□□□□□ -0.21
STAU1-206ENST00000371828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.71□□□□□ -0.217e-7■□□□□ 10.2
STAU1-206ENST00000371828 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
STAU1-206ENST00000371828 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.22
STAU1-206ENST00000371828 WDR62O43379 1518 aa13.7□□□□□ -0.22
STAU1-206ENST00000371828 HNRNPMP52272 730 aaKnown RBP eCLIP13.7□□□□□ -0.226e-7■■■□□ 18.2
STAU1-206ENST00000371828 IQGAP2Q13576 1575 aa13.7□□□□□ -0.22
STAU1-206ENST00000371828 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.7□□□□□ -0.22
STAU1-206ENST00000371828 CCER2I3L3R5 266 aa13.7□□□□□ -0.22
STAU1-206ENST00000371828 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
STAU1-206ENST00000371828 PTPRKQ15262 1439 aa13.69□□□□□ -0.22
STAU1-206ENST00000371828 RTL5Q5HYW3 569 aaPredicted RBP13.69□□□□□ -0.22
STAU1-206ENST00000371828 ADAMTS12P58397 1594 aa13.69□□□□□ -0.22
STAU1-206ENST00000371828 NCOA2Q15596 1464 aa13.69□□□□□ -0.22
STAU1-206ENST00000371828 SENP3-EIF4A1A0A087X0R7 540 aa13.68□□□□□ -0.22
STAU1-206ENST00000371828 PLEKHD1A6NEE1 506 aa13.68□□□□□ -0.22
STAU1-206ENST00000371828 MAGI3Q5TCQ9 1506 aa13.67□□□□□ -0.22
STAU1-206ENST00000371828 THOC2Q8NI27 1593 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms