RNA–Protein interactions for RNA: ENST00000370471.7

FMR1-204, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 4,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-204ENST00000370471 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
FMR1-204ENST00000370471 RAB3GAP2Q9H2M9 1393 aa28.94■■■□□ 2.22
FMR1-204ENST00000370471 DHX57Q6P158 1386 aaKnown RBP28.93■■■□□ 2.22
FMR1-204ENST00000370471 FHOD3Q2V2M9 1422 aa28.9■■■□□ 2.22
FMR1-204ENST00000370471 ARAP1Q96P48 1450 aa28.88■■■□□ 2.21
FMR1-204ENST00000370471 CDK11AQ9UQ88 783 aaPredicted RBP28.87■■■□□ 2.21
FMR1-204ENST00000370471 MYT1LQ9UL68 1186 aa28.86■■■□□ 2.21
FMR1-204ENST00000370471 TOP2BQ02880 1626 aa28.84■■■□□ 2.21
FMR1-204ENST00000370471 FGD5Q6ZNL6 1462 aa28.84■■■□□ 2.21
FMR1-204ENST00000370471 CUX1P39880 1505 aa28.83■■■□□ 2.21
FMR1-204ENST00000370471 CFTRP13569 1480 aa28.83■■■□□ 2.21
FMR1-204ENST00000370471 SETD5Q9C0A6 1442 aa28.83■■■□□ 2.21
FMR1-204ENST00000370471 FANCD2Q9BXW9 1451 aa28.83■■■□□ 2.21
FMR1-204ENST00000370471 PRXQ9BXM0 1461 aa28.82■■■□□ 2.2
FMR1-204ENST00000370471 PEG3Q9GZU2 1588 aa28.81■■■□□ 2.2
FMR1-204ENST00000370471 FKBP8Q14318 412 aa28.79■■■□□ 2.2
FMR1-204ENST00000370471 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
FMR1-204ENST00000370471 CHMP7Q8WUX9 453 aaPredicted RBP28.78■■■□□ 2.2
FMR1-204ENST00000370471 ERICH6Q7L0X2 663 aa28.73■■■□□ 2.19
FMR1-204ENST00000370471 ARHGAP35Q9NRY4 1499 aa28.71■■■□□ 2.19
FMR1-204ENST00000370471 HNRNPUQ00839 825 aaKnown RBP eCLIP28.69■■■□□ 2.18
FMR1-204ENST00000370471 ERICH3Q5RHP9 1530 aa28.66■■■□□ 2.18
FMR1-204ENST00000370471 HMGXB3Q12766 1538 aa28.65■■■□□ 2.18
FMR1-204ENST00000370471 SLC4A1APQ9BWU0 796 aaKnown RBP28.63■■■□□ 2.17
FMR1-204ENST00000370471 FAM9BQ8IZU0 186 aa28.6■■■□□ 2.17
FMR1-204ENST00000370471 PDS5BQ9NTI5 1447 aa28.6■■■□□ 2.17
FMR1-204ENST00000370471 PHLDB1Q86UU1 1377 aa28.6■■■□□ 2.17
FMR1-204ENST00000370471 NESP48681 1621 aa28.6■■■□□ 2.17
FMR1-204ENST00000370471 KCNH8Q96L42 1107 aa28.59■■■□□ 2.17
FMR1-204ENST00000370471 FOXD1Q16676 465 aa28.58■■■□□ 2.17
FMR1-204ENST00000370471 FMN1Q68DA7 1419 aa28.57■■■□□ 2.16
FMR1-204ENST00000370471 EIF4G2P78344 907 aaKnown RBP eCLIP28.54■■■□□ 2.16
FMR1-204ENST00000370471 PPP1R15AO75807 674 aaPredicted RBP28.51■■■□□ 2.15
FMR1-204ENST00000370471 CFDP1Q9UEE9 299 aaPredicted RBP28.51■■■□□ 2.15
FMR1-204ENST00000370471 DNAJC5BQ9UF47 199 aa28.5■■■□□ 2.15
FMR1-204ENST00000370471 KDM2AQ9Y2K7 1162 aa28.5■■■□□ 2.15
FMR1-204ENST00000370471 IRX6P78412 446 aaPredicted RBP28.48■■■□□ 2.15
FMR1-204ENST00000370471 SUPT16HQ9Y5B9 1047 aaKnown RBP28.46■■■□□ 2.15
FMR1-204ENST00000370471 RRBP1Q9P2E9 1410 aaKnown RBP28.46■■■□□ 2.15
FMR1-204ENST00000370471 LRRC9Q6ZRR7 1453 aa28.45■■■□□ 2.14
FMR1-204ENST00000370471 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
FMR1-204ENST00000370471 TIMELESSQ9UNS1 1208 aa28.43■■■□□ 2.14
FMR1-204ENST00000370471 TSPY4P0CV99 314 aa28.43■■■□□ 2.14
FMR1-204ENST00000370471 TSPY10P0CW01 314 aa28.43■■■□□ 2.14
FMR1-204ENST00000370471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.43■■■□□ 2.148e-7■■□□□ 12.1
FMR1-204ENST00000370471 SENP3-EIF4A1A0A087X0R7 540 aa28.42■■■□□ 2.14
FMR1-204ENST00000370471 MRS2Q9HD23 443 aa28.4■■■□□ 2.14
FMR1-204ENST00000370471 PLEKHD1A6NEE1 506 aa28.39■■■□□ 2.14
FMR1-204ENST00000370471 MYT1Q01538 1121 aa28.38■■■□□ 2.13
FMR1-204ENST00000370471 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
FMR1-204ENST00000370471 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
FMR1-204ENST00000370471 POLA1P09884 1462 aaPredicted RBP28.33■■■□□ 2.13
FMR1-204ENST00000370471 BIVM-ERCC5R4GMW8 1640 aa28.32■■■□□ 2.12
FMR1-204ENST00000370471 MPHOSPH9Q99550 1183 aa28.3■■■□□ 2.12
FMR1-204ENST00000370471 HSPA5P11021 654 aaKnown RBP28.3■■■□□ 2.12
FMR1-204ENST00000370471 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
FMR1-204ENST00000370471 SALL2Q9Y467 1007 aaPredicted RBP28.27■■■□□ 2.12
FMR1-204ENST00000370471 AQRO60306 1485 aaKnown RBP eCLIP28.24■■■□□ 2.117e-6■■□□□ 12.2
FMR1-204ENST00000370471 RGL3Q3MIN7 710 aa28.23■■■□□ 2.11
FMR1-204ENST00000370471 FGD6Q6ZV73 1430 aa28.23■■■□□ 2.11
FMR1-204ENST00000370471 L3MBTL2Q969R5 705 aa28.21■■■□□ 2.11
FMR1-204ENST00000370471 TIAM1Q13009 1591 aa28.2■■■□□ 2.1
FMR1-204ENST00000370471 CASKIN1Q8WXD9 1431 aa28.2■■■□□ 2.1
FMR1-204ENST00000370471 CCDC18Q5T9S5 1454 aa28.18■■■□□ 2.1
FMR1-204ENST00000370471 TMC1Q8TDI8 760 aa28.15■■■□□ 2.1
FMR1-204ENST00000370471 ZNF644Q9H582 1327 aaPredicted RBP28.13■■■□□ 2.09
FMR1-204ENST00000370471 CCER2I3L3R5 266 aa28.12■■■□□ 2.09
FMR1-204ENST00000370471 PKD2Q13563 968 aa28.09■■■□□ 2.09
FMR1-204ENST00000370471 FYCO1Q9BQS8 1478 aa28.07■■■□□ 2.08
FMR1-204ENST00000370471 CARD11Q9BXL7 1154 aa28.07■■■□□ 2.08
FMR1-204ENST00000370471 MYOM3Q5VTT5 1437 aa28.07■■■□□ 2.08
FMR1-204ENST00000370471 DNMBPQ6XZF7 1577 aa28.06■■■□□ 2.08
FMR1-204ENST00000370471 NCOA2Q15596 1464 aa28.06■■■□□ 2.08
FMR1-204ENST00000370471 JPH4Q96JJ6 628 aa28.04■■■□□ 2.08
FMR1-204ENST00000370471 ABCA10Q8WWZ4 1543 aa28.04■■■□□ 2.08
FMR1-204ENST00000370471 PCF11O94913 1555 aaKnown RBP28.01■■■□□ 2.07
FMR1-204ENST00000370471 DCAF11Q8TEB1 546 aa27.99■■■□□ 2.07
FMR1-204ENST00000370471 UACAQ9BZF9 1416 aa27.96■■■□□ 2.07
FMR1-204ENST00000370471 HNRNPMP52272 730 aaKnown RBP eCLIP27.94■■■□□ 2.06
FMR1-204ENST00000370471 WDR97A6NE52 1622 aa27.93■■■□□ 2.06
FMR1-204ENST00000370471 CHGAP10645 457 aaKnown RBP27.92■■■□□ 2.06
FMR1-204ENST00000370471 EFCAB5A4FU69 1503 aa27.92■■■□□ 2.06
FMR1-204ENST00000370471 CARMIL2Q6F5E8 1435 aa27.91■■■□□ 2.06
FMR1-204ENST00000370471 URB2Q14146 1524 aaKnown RBP27.9■■■□□ 2.06
FMR1-204ENST00000370471 NUP155O75694 1391 aa27.9■■■□□ 2.06
FMR1-204ENST00000370471 CCDC136Q96JN2 1154 aa27.84■■■□□ 2.05
FMR1-204ENST00000370471 TSHZ2Q9NRE2 1034 aa27.82■■■□□ 2.04
FMR1-204ENST00000370471 HFM1A2PYH4 1435 aa27.8■■■□□ 2.04
FMR1-204ENST00000370471 ANKRD30AQ9BXX3 1397 aa27.8■■■□□ 2.04
FMR1-204ENST00000370471 MAP3K1Q13233 1512 aa27.8■■■□□ 2.04
FMR1-204ENST00000370471 GRIN2BQ13224 1484 aa27.78■■■□□ 2.04
FMR1-204ENST00000370471 B4GALNT3Q6L9W6 998 aa27.78■■■□□ 2.04
FMR1-204ENST00000370471 SENP3Q9H4L4 574 aaPredicted RBP27.78■■■□□ 2.04
FMR1-204ENST00000370471 NAIPQ13075 1403 aa27.77■■■□□ 2.04
FMR1-204ENST00000370471 WASHC2AQ641Q2 1341 aa27.76■■■□□ 2.03
FMR1-204ENST00000370471 CDK13Q14004 1512 aaKnown RBP27.73■■■□□ 2.03
FMR1-204ENST00000370471 PRDM2Q13029 1718 aa27.73■■■□□ 2.03
FMR1-204ENST00000370471 MAPKBP1O60336 1514 aa27.72■■■□□ 2.03
FMR1-204ENST00000370471 LAMC3Q9Y6N6 1575 aa27.71■■■□□ 2.03
FMR1-204ENST00000370471 PRKRIP1Q9H875 184 aaPredicted RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms