RNA–Protein interactions for RNA: ENST00000370275.8

ARFGAP1-202, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARFGAP1, Length 3,467 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-202ENST00000370275 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
ARFGAP1-202ENST00000370275 MAPKBP1O60336 1514 aa20.93■□□□□ 0.94
ARFGAP1-202ENST00000370275 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
ARFGAP1-202ENST00000370275 DDX10Q13206 875 aaKnown RBP20.9■□□□□ 0.94
ARFGAP1-202ENST00000370275 LRRC9Q6ZRR7 1453 aa20.89■□□□□ 0.93
ARFGAP1-202ENST00000370275 SETD5Q9C0A6 1442 aa20.89■□□□□ 0.93
ARFGAP1-202ENST00000370275 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
ARFGAP1-202ENST00000370275 WDR97A6NE52 1622 aa20.83■□□□□ 0.93
ARFGAP1-202ENST00000370275 RAD54L2Q9Y4B4 1467 aa20.82■□□□□ 0.92
ARFGAP1-202ENST00000370275 BCANQ96GW7 911 aa20.82■□□□□ 0.92
ARFGAP1-202ENST00000370275 PCF11O94913 1555 aaKnown RBP20.81■□□□□ 0.92
ARFGAP1-202ENST00000370275 PRDM2Q13029 1718 aa20.8■□□□□ 0.92
ARFGAP1-202ENST00000370275 FHAD1B1AJZ9 1412 aa20.75■□□□□ 0.91
ARFGAP1-202ENST00000370275 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
ARFGAP1-202ENST00000370275 MAP3K1Q13233 1512 aa20.74■□□□□ 0.91
ARFGAP1-202ENST00000370275 NESP48681 1621 aa20.7■□□□□ 0.9
ARFGAP1-202ENST00000370275 CFAP43Q8NDM7 1665 aa20.68■□□□□ 0.9
ARFGAP1-202ENST00000370275 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
ARFGAP1-202ENST00000370275 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
ARFGAP1-202ENST00000370275 TSHZ2Q9NRE2 1034 aa20.67■□□□□ 0.9
ARFGAP1-202ENST00000370275 PPP1R15AO75807 674 aaPredicted RBP20.65■□□□□ 0.9
ARFGAP1-202ENST00000370275 FKBP8Q14318 412 aa20.65■□□□□ 0.9
ARFGAP1-202ENST00000370275 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
ARFGAP1-202ENST00000370275 MYT1Q01538 1121 aa20.62■□□□□ 0.89
ARFGAP1-202ENST00000370275 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
ARFGAP1-202ENST00000370275 MTUS2Q5JR59 1369 aa20.59■□□□□ 0.89
ARFGAP1-202ENST00000370275 CASKIN1Q8WXD9 1431 aa20.59■□□□□ 0.89
ARFGAP1-202ENST00000370275 FYCO1Q9BQS8 1478 aa20.59■□□□□ 0.89
ARFGAP1-202ENST00000370275 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
ARFGAP1-202ENST00000370275 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
ARFGAP1-202ENST00000370275 PTPRKQ15262 1439 aa20.57■□□□□ 0.88
ARFGAP1-202ENST00000370275 TONSLQ96HA7 1378 aa20.57■□□□□ 0.88
ARFGAP1-202ENST00000370275 DNMBPQ6XZF7 1577 aa20.57■□□□□ 0.88
ARFGAP1-202ENST00000370275 FGD6Q6ZV73 1430 aa20.57■□□□□ 0.88
ARFGAP1-202ENST00000370275 ANP32CO43423 234 aa20.55■□□□□ 0.88
ARFGAP1-202ENST00000370275 ARID3CA6NKF2 412 aa20.54■□□□□ 0.88
ARFGAP1-202ENST00000370275 CHIC2Q9UKJ5 165 aa20.54■□□□□ 0.88
ARFGAP1-202ENST00000370275 CCDC18Q5T9S5 1454 aa20.53■□□□□ 0.88
ARFGAP1-202ENST00000370275 EFCAB5A4FU69 1503 aa20.51■□□□□ 0.87
ARFGAP1-202ENST00000370275 RRP7BPQ9NSQ0 103 aa20.51■□□□□ 0.87
ARFGAP1-202ENST00000370275 TIMELESSQ9UNS1 1208 aa20.49■□□□□ 0.87
ARFGAP1-202ENST00000370275 CTTNBP2Q8WZ74 1663 aa20.49■□□□□ 0.87
ARFGAP1-202ENST00000370275 FMN1Q68DA7 1419 aa20.49■□□□□ 0.87
ARFGAP1-202ENST00000370275 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
ARFGAP1-202ENST00000370275 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
ARFGAP1-202ENST00000370275 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.875e-7■■■■□ 23.1
ARFGAP1-202ENST00000370275 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
ARFGAP1-202ENST00000370275 CUL7Q14999 1698 aa20.44■□□□□ 0.86
ARFGAP1-202ENST00000370275 NCOA2Q15596 1464 aa20.44■□□□□ 0.86
ARFGAP1-202ENST00000370275 LRRIQ1Q96JM4 1722 aa20.43■□□□□ 0.86
ARFGAP1-202ENST00000370275 NEFLP07196 543 aa20.43■□□□□ 0.86
ARFGAP1-202ENST00000370275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.43■□□□□ 0.861e-7■■■□□ 19
ARFGAP1-202ENST00000370275 PTPN23Q9H3S7 1636 aa20.42■□□□□ 0.86
ARFGAP1-202ENST00000370275 HFM1A2PYH4 1435 aa20.42■□□□□ 0.86
ARFGAP1-202ENST00000370275 NAIPQ13075 1403 aa20.42■□□□□ 0.86
ARFGAP1-202ENST00000370275 UACAQ9BZF9 1416 aa20.42■□□□□ 0.86
ARFGAP1-202ENST00000370275 CCER2I3L3R5 266 aa20.41■□□□□ 0.86
ARFGAP1-202ENST00000370275 MYOM3Q5VTT5 1437 aa20.39■□□□□ 0.86
ARFGAP1-202ENST00000370275 FOXD1Q16676 465 aa20.39■□□□□ 0.85
ARFGAP1-202ENST00000370275 IRX6P78412 446 aaPredicted RBP20.38■□□□□ 0.85
ARFGAP1-202ENST00000370275 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
ARFGAP1-202ENST00000370275 GRIN2BQ13224 1484 aa20.35■□□□□ 0.85
ARFGAP1-202ENST00000370275 HNRNPUQ00839 825 aaKnown RBP eCLIP20.35■□□□□ 0.85
ARFGAP1-202ENST00000370275 MAGI3Q5TCQ9 1506 aa20.34■□□□□ 0.85
ARFGAP1-202ENST00000370275 HSPA5P11021 654 aaKnown RBP20.33■□□□□ 0.85
ARFGAP1-202ENST00000370275 SAMD9Q5K651 1589 aa20.32■□□□□ 0.84
ARFGAP1-202ENST00000370275 WASHC2AQ641Q2 1341 aa20.29■□□□□ 0.84
ARFGAP1-202ENST00000370275 SUPT6HQ7KZ85 1726 aaKnown RBP20.29■□□□□ 0.84
ARFGAP1-202ENST00000370275 ABCA5Q8WWZ7 1642 aa20.28■□□□□ 0.84
ARFGAP1-202ENST00000370275 KDM5BQ9UGL1 1544 aa20.28■□□□□ 0.84
ARFGAP1-202ENST00000370275 CCDC184Q52MB2 194 aa20.27■□□□□ 0.84
ARFGAP1-202ENST00000370275 ANP32EQ9BTT0 268 aa20.27■□□□□ 0.84
ARFGAP1-202ENST00000370275 KDM6BO15054 1643 aa20.27■□□□□ 0.83
ARFGAP1-202ENST00000370275 RBM19Q9Y4C8 960 aaKnown RBP20.26■□□□□ 0.83
ARFGAP1-202ENST00000370275 EHBP1L1Q8N3D4 1523 aa20.25■□□□□ 0.83
ARFGAP1-202ENST00000370275 UGGT2Q9NYU1 1516 aa20.24■□□□□ 0.83
ARFGAP1-202ENST00000370275 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
ARFGAP1-202ENST00000370275 DENND4BO75064 1496 aaPredicted RBP20.24■□□□□ 0.83
ARFGAP1-202ENST00000370275 CDK13Q14004 1512 aaKnown RBP20.24■□□□□ 0.83
ARFGAP1-202ENST00000370275 LAMC3Q9Y6N6 1575 aa20.23■□□□□ 0.83
ARFGAP1-202ENST00000370275 L3MBTL2Q969R5 705 aa20.23■□□□□ 0.83
ARFGAP1-202ENST00000370275 MPHOSPH9Q99550 1183 aa20.22■□□□□ 0.83
ARFGAP1-202ENST00000370275 C11orf95C9JLR9 678 aaPredicted RBP20.22■□□□□ 0.83
ARFGAP1-202ENST00000370275 EIF4G2P78344 907 aaKnown RBP eCLIP20.2■□□□□ 0.82
ARFGAP1-202ENST00000370275 ZNF644Q9H582 1327 aaPredicted RBP20.18■□□□□ 0.82
ARFGAP1-202ENST00000370275 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
ARFGAP1-202ENST00000370275 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
ARFGAP1-202ENST00000370275 FAM9BQ8IZU0 186 aa20.17■□□□□ 0.82
ARFGAP1-202ENST00000370275 EPRSP07814 1512 aaKnown RBP20.15■□□□□ 0.82
ARFGAP1-202ENST00000370275 ARHGEF11O15085 1522 aa20.15■□□□□ 0.82
ARFGAP1-202ENST00000370275 NBPF8Q3BBV2 869 aa20.14■□□□□ 0.81
ARFGAP1-202ENST00000370275 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
ARFGAP1-202ENST00000370275 SENP3-EIF4A1A0A087X0R7 540 aa20.11■□□□□ 0.81
ARFGAP1-202ENST00000370275 TCOF1Q13428 1488 aaKnown RBP20.1■□□□□ 0.81
ARFGAP1-202ENST00000370275 TARBP1Q13395 1621 aaKnown RBP20.1■□□□□ 0.81
ARFGAP1-202ENST00000370275 HECW1Q76N89 1606 aa20.1■□□□□ 0.81
ARFGAP1-202ENST00000370275 POLR3GLQ9BT43 218 aa20.1■□□□□ 0.81
ARFGAP1-202ENST00000370275 GCC2Q8IWJ2 1684 aa20.09■□□□□ 0.81
ARFGAP1-202ENST00000370275 IQGAP2Q13576 1575 aa20.08■□□□□ 0.81
ARFGAP1-202ENST00000370275 MRS2Q9HD23 443 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms