RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 PRXQ9BXM0 1461 aa23.94■■□□□ 1.42
DKC1-201ENST00000369550 TRIM52Q96A61 297 aa23.9■■□□□ 1.42
DKC1-201ENST00000369550 RAB3GAP2Q9H2M9 1393 aa23.88■■□□□ 1.41
DKC1-201ENST00000369550 FANCD2Q9BXW9 1451 aa23.85■■□□□ 1.41
DKC1-201ENST00000369550 MAPKBP1O60336 1514 aa23.83■■□□□ 1.41
DKC1-201ENST00000369550 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
DKC1-201ENST00000369550 ANP32CO43423 234 aa23.79■■□□□ 1.4
DKC1-201ENST00000369550 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
DKC1-201ENST00000369550 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
DKC1-201ENST00000369550 CCER2I3L3R5 266 aa23.77■■□□□ 1.4
DKC1-201ENST00000369550 SIN3AQ96ST3 1273 aa23.77■■□□□ 1.4
DKC1-201ENST00000369550 MSH5O43196 834 aa23.76■■□□□ 1.39
DKC1-201ENST00000369550 HIRIP3Q9BW71 556 aaPredicted RBP23.75■■□□□ 1.39
DKC1-201ENST00000369550 ERICH6Q7L0X2 663 aa23.74■■□□□ 1.39
DKC1-201ENST00000369550 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
DKC1-201ENST00000369550 NESP48681 1621 aa23.73■■□□□ 1.39
DKC1-201ENST00000369550 DNMBPQ6XZF7 1577 aa23.73■■□□□ 1.39
DKC1-201ENST00000369550 SETD5Q9C0A6 1442 aa23.72■■□□□ 1.39
DKC1-201ENST00000369550 IGF1RP08069 1367 aa23.68■■□□□ 1.38
DKC1-201ENST00000369550 CDK11AQ9UQ88 783 aaPredicted RBP23.66■■□□□ 1.38
DKC1-201ENST00000369550 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
DKC1-201ENST00000369550 FANCIQ9NVI1 1328 aa23.65■■□□□ 1.38
DKC1-201ENST00000369550 ARHGAP35Q9NRY4 1499 aa23.65■■□□□ 1.38
DKC1-201ENST00000369550 FAM50AQ14320 339 aaKnown RBP23.62■■□□□ 1.37
DKC1-201ENST00000369550 TIMELESSQ9UNS1 1208 aa23.62■■□□□ 1.37
DKC1-201ENST00000369550 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
DKC1-201ENST00000369550 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.37
DKC1-201ENST00000369550 IRX6P78412 446 aaPredicted RBP23.58■■□□□ 1.37
DKC1-201ENST00000369550 CARMIL1Q5VZK9 1371 aa23.57■■□□□ 1.36
DKC1-201ENST00000369550 PDS5BQ9NTI5 1447 aa23.54■■□□□ 1.36
DKC1-201ENST00000369550 RAD54L2Q9Y4B4 1467 aa23.54■■□□□ 1.36
DKC1-201ENST00000369550 HNRNPUQ00839 825 aaKnown RBP eCLIP23.54■■□□□ 1.36
DKC1-201ENST00000369550 URB2Q14146 1524 aaKnown RBP23.52■■□□□ 1.36
DKC1-201ENST00000369550 TIAM1Q13009 1591 aa23.51■■□□□ 1.35
DKC1-201ENST00000369550 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
DKC1-201ENST00000369550 PHLDB1Q86UU1 1377 aa23.5■■□□□ 1.35
DKC1-201ENST00000369550 LRRC9Q6ZRR7 1453 aa23.46■■□□□ 1.35
DKC1-201ENST00000369550 TONSLQ96HA7 1378 aa23.45■■□□□ 1.34
DKC1-201ENST00000369550 MYT1LQ9UL68 1186 aa23.45■■□□□ 1.34
DKC1-201ENST00000369550 MAP3K1Q13233 1512 aa23.44■■□□□ 1.34
DKC1-201ENST00000369550 KIF21AQ7Z4S6 1674 aa23.43■■□□□ 1.34
DKC1-201ENST00000369550 CUL7Q14999 1698 aa23.42■■□□□ 1.34
DKC1-201ENST00000369550 ATP1B4Q9UN42 357 aaPredicted RBP23.4■■□□□ 1.34
DKC1-201ENST00000369550 PPP4R2Q9NY27 417 aa23.37■■□□□ 1.33
DKC1-201ENST00000369550 DEKP35659 375 aaKnown RBP23.36■■□□□ 1.33
DKC1-201ENST00000369550 ERICH6BQ5W0A0 696 aa23.35■■□□□ 1.33
DKC1-201ENST00000369550 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
DKC1-201ENST00000369550 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
DKC1-201ENST00000369550 P3H3Q8IVL6 736 aa23.28■■□□□ 1.32
DKC1-201ENST00000369550 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
DKC1-201ENST00000369550 CTTNBP2Q8WZ74 1663 aa23.27■■□□□ 1.32
DKC1-201ENST00000369550 TDRD9Q8NDG6 1382 aaKnown RBP23.26■■□□□ 1.31
DKC1-201ENST00000369550 B4GALNT3Q6L9W6 998 aa23.25■■□□□ 1.31
DKC1-201ENST00000369550 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
DKC1-201ENST00000369550 EFCAB5A4FU69 1503 aa23.23■■□□□ 1.31
DKC1-201ENST00000369550 NBR1Q14596 966 aa23.21■■□□□ 1.31
DKC1-201ENST00000369550 NOP58Q9Y2X3 529 aaKnown RBP23.21■■□□□ 1.31
DKC1-201ENST00000369550 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
DKC1-201ENST00000369550 CFAP43Q8NDM7 1665 aa23.2■■□□□ 1.3
DKC1-201ENST00000369550 CCDC18Q5T9S5 1454 aa23.19■■□□□ 1.3
DKC1-201ENST00000369550 PCF11O94913 1555 aaKnown RBP23.19■■□□□ 1.3
DKC1-201ENST00000369550 WASHC2AQ641Q2 1341 aa23.18■■□□□ 1.3
DKC1-201ENST00000369550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.38e-7■■■□□ 19.1
DKC1-201ENST00000369550 FAM9BQ8IZU0 186 aa23.16■■□□□ 1.3
DKC1-201ENST00000369550 UACAQ9BZF9 1416 aa23.16■■□□□ 1.3
DKC1-201ENST00000369550 HSPA5P11021 654 aaKnown RBP23.14■■□□□ 1.29
DKC1-201ENST00000369550 CCDC184Q52MB2 194 aa23.13■■□□□ 1.29
DKC1-201ENST00000369550 FHOD3Q2V2M9 1422 aa23.12■■□□□ 1.29
DKC1-201ENST00000369550 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
DKC1-201ENST00000369550 FGD6Q6ZV73 1430 aa23.09■■□□□ 1.29
DKC1-201ENST00000369550 PAK3O75914 559 aaPredicted RBP23.09■■□□□ 1.29
DKC1-201ENST00000369550 AQRO60306 1485 aaKnown RBP eCLIP23.09■■□□□ 1.298e-10■■■■□ 22.9
DKC1-201ENST00000369550 HFM1A2PYH4 1435 aa23.09■■□□□ 1.29
DKC1-201ENST00000369550 MRS2Q9HD23 443 aa23.09■■□□□ 1.29
DKC1-201ENST00000369550 FYCO1Q9BQS8 1478 aa23.09■■□□□ 1.29
DKC1-201ENST00000369550 PRKCSHP14314 528 aaPredicted RBP23.08■■□□□ 1.29
DKC1-201ENST00000369550 EIF4G2P78344 907 aaKnown RBP eCLIP23.07■■□□□ 1.28
DKC1-201ENST00000369550 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
DKC1-201ENST00000369550 WDR62O43379 1518 aa23.06■■□□□ 1.28
DKC1-201ENST00000369550 CASKIN1Q8WXD9 1431 aa23.06■■□□□ 1.28
DKC1-201ENST00000369550 SAMD9Q5K651 1589 aa23.05■■□□□ 1.28
DKC1-201ENST00000369550 CNTLNQ9NXG0 1405 aa23.05■■□□□ 1.28
DKC1-201ENST00000369550 FMN1Q68DA7 1419 aa23.04■■□□□ 1.28
DKC1-201ENST00000369550 PRKRIP1Q9H875 184 aaPredicted RBP23.03■■□□□ 1.28
DKC1-201ENST00000369550 PTPN23Q9H3S7 1636 aa23.03■■□□□ 1.28
DKC1-201ENST00000369550 ANP32AP39687 249 aaKnown RBP23.02■■□□□ 1.28
DKC1-201ENST00000369550 RTL5Q5HYW3 569 aaPredicted RBP23.02■■□□□ 1.28
DKC1-201ENST00000369550 PTPRKQ15262 1439 aa23.02■■□□□ 1.28
DKC1-201ENST00000369550 KDM5BQ9UGL1 1544 aa23.02■■□□□ 1.28
DKC1-201ENST00000369550 IFT140Q96RY7 1462 aa23.01■■□□□ 1.27
DKC1-201ENST00000369550 ADAMTS12P58397 1594 aa23■■□□□ 1.27
DKC1-201ENST00000369550 MTUS2Q5JR59 1369 aa22.99■■□□□ 1.27
DKC1-201ENST00000369550 NCOA2Q15596 1464 aa22.99■■□□□ 1.27
DKC1-201ENST00000369550 NAIPQ13075 1403 aa22.99■■□□□ 1.27
DKC1-201ENST00000369550 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
DKC1-201ENST00000369550 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
DKC1-201ENST00000369550 IPO9Q96P70 1041 aaKnown RBP22.96■■□□□ 1.27
DKC1-201ENST00000369550 CCDC136Q96JN2 1154 aa22.95■■□□□ 1.26
DKC1-201ENST00000369550 ZBTB47Q9UFB7 747 aaPredicted RBP22.94■■□□□ 1.26
DKC1-201ENST00000369550 C11orf95C9JLR9 678 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms