RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 CUX2O14529 1486 aa17.37■□□□□ 0.37
PHGDH-201ENST00000369407 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
PHGDH-201ENST00000369407 MSH5O43196 834 aa17.36■□□□□ 0.37
PHGDH-201ENST00000369407 ARHGAP35Q9NRY4 1499 aa17.35■□□□□ 0.37
PHGDH-201ENST00000369407 ANP32CO43423 234 aa17.35■□□□□ 0.37
PHGDH-201ENST00000369407 P3H3Q8IVL6 736 aa17.34■□□□□ 0.37
PHGDH-201ENST00000369407 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
PHGDH-201ENST00000369407 SETD5Q9C0A6 1442 aa17.32■□□□□ 0.36
PHGDH-201ENST00000369407 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
PHGDH-201ENST00000369407 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
PHGDH-201ENST00000369407 CUX1P39880 1505 aa17.24■□□□□ 0.35
PHGDH-201ENST00000369407 HNRNPUQ00839 825 aaKnown RBP eCLIP17.24■□□□□ 0.35
PHGDH-201ENST00000369407 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
PHGDH-201ENST00000369407 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
PHGDH-201ENST00000369407 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
PHGDH-201ENST00000369407 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-201ENST00000369407 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-201ENST00000369407 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
PHGDH-201ENST00000369407 LRRC9Q6ZRR7 1453 aa17.16■□□□□ 0.34
PHGDH-201ENST00000369407 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
PHGDH-201ENST00000369407 IGF1RP08069 1367 aa17.12■□□□□ 0.33
PHGDH-201ENST00000369407 CCDC184Q52MB2 194 aa17.08■□□□□ 0.33
PHGDH-201ENST00000369407 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.33
PHGDH-201ENST00000369407 CARMIL1Q5VZK9 1371 aa17.07■□□□□ 0.32
PHGDH-201ENST00000369407 CCDC136Q96JN2 1154 aa17.07■□□□□ 0.32
PHGDH-201ENST00000369407 FANCIQ9NVI1 1328 aa17.06■□□□□ 0.32
PHGDH-201ENST00000369407 B4GALNT3Q6L9W6 998 aa17.06■□□□□ 0.32
PHGDH-201ENST00000369407 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
PHGDH-201ENST00000369407 FAM9BQ8IZU0 186 aa17.03■□□□□ 0.32
PHGDH-201ENST00000369407 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-201ENST00000369407 WASHC2AQ641Q2 1341 aa16.99■□□□□ 0.31
PHGDH-201ENST00000369407 HSPA5P11021 654 aaKnown RBP16.99■□□□□ 0.31
PHGDH-201ENST00000369407 PCF11O94913 1555 aaKnown RBP16.99■□□□□ 0.31
PHGDH-201ENST00000369407 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
PHGDH-201ENST00000369407 MAP3K1Q13233 1512 aa16.98■□□□□ 0.31
PHGDH-201ENST00000369407 NBR1Q14596 966 aa16.97■□□□□ 0.31
PHGDH-201ENST00000369407 PPP4R2Q9NY27 417 aa16.97■□□□□ 0.31
PHGDH-201ENST00000369407 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
PHGDH-201ENST00000369407 PTPRKQ15262 1439 aa16.96■□□□□ 0.31
PHGDH-201ENST00000369407 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
PHGDH-201ENST00000369407 DEKP35659 375 aaKnown RBP16.95■□□□□ 0.3
PHGDH-201ENST00000369407 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
PHGDH-201ENST00000369407 CFTRP13569 1480 aa16.95■□□□□ 0.3
PHGDH-201ENST00000369407 RRP7BPQ9NSQ0 103 aa16.94■□□□□ 0.3
PHGDH-201ENST00000369407 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■□□□ 14.4
PHGDH-201ENST00000369407 RTN4Q9NQC3 1192 aaKnown RBP16.92■□□□□ 0.3
PHGDH-201ENST00000369407 SALL2Q9Y467 1007 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-201ENST00000369407 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-201ENST00000369407 MRS2Q9HD23 443 aa16.91■□□□□ 0.3
PHGDH-201ENST00000369407 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-201ENST00000369407 FOXD1Q16676 465 aa16.9■□□□□ 0.3
PHGDH-201ENST00000369407 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
PHGDH-201ENST00000369407 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
PHGDH-201ENST00000369407 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
PHGDH-201ENST00000369407 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-201ENST00000369407 MTUS2Q5JR59 1369 aa16.88■□□□□ 0.29
PHGDH-201ENST00000369407 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
PHGDH-201ENST00000369407 CFAP43Q8NDM7 1665 aa16.87■□□□□ 0.29
PHGDH-201ENST00000369407 EIF4G2P78344 907 aaKnown RBP eCLIP16.86■□□□□ 0.297e-14■■■■■ 63.8
PHGDH-201ENST00000369407 PRKRIP1Q9H875 184 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-201ENST00000369407 HFM1A2PYH4 1435 aa16.84■□□□□ 0.29
PHGDH-201ENST00000369407 NAIPQ13075 1403 aa16.84■□□□□ 0.29
PHGDH-201ENST00000369407 NOP58Q9Y2X3 529 aaKnown RBP16.83■□□□□ 0.28
PHGDH-201ENST00000369407 KDM5BQ9UGL1 1544 aa16.83■□□□□ 0.28
PHGDH-201ENST00000369407 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
PHGDH-201ENST00000369407 CASKIN1Q8WXD9 1431 aa16.82■□□□□ 0.28
PHGDH-201ENST00000369407 HMGXB3Q12766 1538 aa16.81■□□□□ 0.28
PHGDH-201ENST00000369407 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
PHGDH-201ENST00000369407 PTPN23Q9H3S7 1636 aa16.81■□□□□ 0.28
PHGDH-201ENST00000369407 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
PHGDH-201ENST00000369407 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
PHGDH-201ENST00000369407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.8■□□□□ 0.28
PHGDH-201ENST00000369407 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
PHGDH-201ENST00000369407 ERICH6BQ5W0A0 696 aa16.79■□□□□ 0.28
PHGDH-201ENST00000369407 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
PHGDH-201ENST00000369407 ZBED9Q6R2W3 1325 aa16.77■□□□□ 0.27
PHGDH-201ENST00000369407 AKNAQ7Z591 1439 aa16.77■□□□□ 0.27
PHGDH-201ENST00000369407 FMN1Q68DA7 1419 aa16.75■□□□□ 0.27
PHGDH-201ENST00000369407 CCDC7Q96M83 1385 aa16.75■□□□□ 0.27
PHGDH-201ENST00000369407 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
PHGDH-201ENST00000369407 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
PHGDH-201ENST00000369407 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
PHGDH-201ENST00000369407 MPHOSPH9Q99550 1183 aa16.73■□□□□ 0.27
PHGDH-201ENST00000369407 MYOM3Q5VTT5 1437 aa16.71■□□□□ 0.27
PHGDH-201ENST00000369407 DENND4BO75064 1496 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-201ENST00000369407 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
PHGDH-201ENST00000369407 KIF7Q2M1P5 1343 aa16.7■□□□□ 0.26
PHGDH-201ENST00000369407 NPM2Q86SE8 214 aaKnown RBP16.69■□□□□ 0.26
PHGDH-201ENST00000369407 SNAPC4Q5SXM2 1469 aa16.68■□□□□ 0.26
PHGDH-201ENST00000369407 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
PHGDH-201ENST00000369407 EIF5BO60841 1220 aaKnown RBP16.67■□□□□ 0.26
PHGDH-201ENST00000369407 ANP32AP39687 249 aaKnown RBP16.67■□□□□ 0.26
PHGDH-201ENST00000369407 NCOA1Q15788 1441 aa16.67■□□□□ 0.26
PHGDH-201ENST00000369407 KDM6BO15054 1643 aa16.66■□□□□ 0.26
PHGDH-201ENST00000369407 ZBTB47Q9UFB7 747 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-201ENST00000369407 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
PHGDH-201ENST00000369407 IPO9Q96P70 1041 aaKnown RBP16.65■□□□□ 0.26
PHGDH-201ENST00000369407 IL27Q8NEV9 243 aa16.65■□□□□ 0.26
PHGDH-201ENST00000369407 RTL5Q5HYW3 569 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-201ENST00000369407 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms