RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 RTL5Q5HYW3 569 aaPredicted RBP13.3□□□□□ -0.28
SCAF11-202ENST00000369367 MYT1Q01538 1121 aa13.3□□□□□ -0.28
SCAF11-202ENST00000369367 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
SCAF11-202ENST00000369367 CUX2O14529 1486 aa13.29□□□□□ -0.28
SCAF11-202ENST00000369367 KANK1Q14678 1352 aa13.29□□□□□ -0.28
SCAF11-202ENST00000369367 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
SCAF11-202ENST00000369367 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
SCAF11-202ENST00000369367 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.29
SCAF11-202ENST00000369367 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
SCAF11-202ENST00000369367 TNIKQ9UKE5 1360 aa13.26□□□□□ -0.29
SCAF11-202ENST00000369367 RRP7BPQ9NSQ0 103 aa13.25□□□□□ -0.29
SCAF11-202ENST00000369367 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
SCAF11-202ENST00000369367 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
SCAF11-202ENST00000369367 CEP162Q5TB80 1403 aa13.23□□□□□ -0.29
SCAF11-202ENST00000369367 TMC1Q8TDI8 760 aa13.23□□□□□ -0.29
SCAF11-202ENST00000369367 SOGA1O94964 1423 aa13.22□□□□□ -0.29
SCAF11-202ENST00000369367 CADPSQ9ULU8 1353 aa13.21□□□□□ -0.3
SCAF11-202ENST00000369367 EIF4G2P78344 907 aaKnown RBP eCLIP13.21□□□□□ -0.31e-13■■■■■ 57.3
SCAF11-202ENST00000369367 A0A0G2JS52 829 aa13.2□□□□□ -0.3
SCAF11-202ENST00000369367 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
SCAF11-202ENST00000369367 ABCC8Q09428 1581 aa13.19□□□□□ -0.3
SCAF11-202ENST00000369367 BCL11AQ9H165 835 aa13.18□□□□□ -0.3
SCAF11-202ENST00000369367 POGKQ9P215 609 aa13.16□□□□□ -0.3
SCAF11-202ENST00000369367 EFCAB2Q5VUJ9 269 aa13.15□□□□□ -0.3
SCAF11-202ENST00000369367 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
SCAF11-202ENST00000369367 UPF2Q9HAU5 1272 aaKnown RBP13.13□□□□□ -0.31
SCAF11-202ENST00000369367 RGL3Q3MIN7 710 aa13.13□□□□□ -0.31
SCAF11-202ENST00000369367 CCDC88BA6NC98 1476 aa13.13□□□□□ -0.31
SCAF11-202ENST00000369367 FMN1Q68DA7 1419 aa13.12□□□□□ -0.31
SCAF11-202ENST00000369367 MYH16Q9H6N6 1097 aa13.12□□□□□ -0.31
SCAF11-202ENST00000369367 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
SCAF11-202ENST00000369367 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
SCAF11-202ENST00000369367 KNSTRNQ9Y448 316 aa13.09□□□□□ -0.31
SCAF11-202ENST00000369367 DDX10Q13206 875 aaKnown RBP13.09□□□□□ -0.31
SCAF11-202ENST00000369367 RSPH4AQ5TD94 716 aa13.09□□□□□ -0.31
SCAF11-202ENST00000369367 TDRD9Q8NDG6 1382 aaKnown RBP13.08□□□□□ -0.32
SCAF11-202ENST00000369367 NUDCQ9Y266 331 aa13.07□□□□□ -0.32
SCAF11-202ENST00000369367 HNRNPUQ00839 825 aaKnown RBP eCLIP13.07□□□□□ -0.32
SCAF11-202ENST00000369367 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
SCAF11-202ENST00000369367 MLECQ14165 292 aa13.07□□□□□ -0.32
SCAF11-202ENST00000369367 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
SCAF11-202ENST00000369367 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
SCAF11-202ENST00000369367 PNNQ9H307 717 aaKnown RBP13.06□□□□□ -0.32
SCAF11-202ENST00000369367 MRS2Q9HD23 443 aa13.06□□□□□ -0.32
SCAF11-202ENST00000369367 CARD11Q9BXL7 1154 aa13.05□□□□□ -0.32
SCAF11-202ENST00000369367 LMOD2Q6P5Q4 547 aa13.05□□□□□ -0.32
SCAF11-202ENST00000369367 HSP90AA1P07900 732 aaKnown RBP13.04□□□□□ -0.32
SCAF11-202ENST00000369367 ANP32AP39687 249 aaKnown RBP13.03□□□□□ -0.32
SCAF11-202ENST00000369367 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
SCAF11-202ENST00000369367 GGT6Q6P531 493 aa13.01□□□□□ -0.33
SCAF11-202ENST00000369367 ARHGAP35Q9NRY4 1499 aa13.01□□□□□ -0.33
SCAF11-202ENST00000369367 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
SCAF11-202ENST00000369367 JPH4Q96JJ6 628 aa13□□□□□ -0.33
SCAF11-202ENST00000369367 SMARCA4P51532 1647 aa13□□□□□ -0.33
SCAF11-202ENST00000369367 MAPK8IP3Q9UPT6 1336 aa12.99□□□□□ -0.33
SCAF11-202ENST00000369367 FANCD2Q9BXW9 1451 aa12.99□□□□□ -0.33
SCAF11-202ENST00000369367 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
SCAF11-202ENST00000369367 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-202ENST00000369367 TIMELESSQ9UNS1 1208 aa12.98□□□□□ -0.33
SCAF11-202ENST00000369367 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
SCAF11-202ENST00000369367 ANKRD30AQ9BXX3 1397 aa12.97□□□□□ -0.33
SCAF11-202ENST00000369367 CHMP4BQ9H444 224 aaKnown RBP12.97□□□□□ -0.33
SCAF11-202ENST00000369367 TMF1P82094 1093 aa12.96□□□□□ -0.33
SCAF11-202ENST00000369367 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
SCAF11-202ENST00000369367 CCDC18Q5T9S5 1454 aa12.96□□□□□ -0.33
SCAF11-202ENST00000369367 PPM1GO15355 546 aaPredicted RBP12.96□□□□□ -0.34
SCAF11-202ENST00000369367 NPHP1O15259 732 aa12.95□□□□□ -0.34
SCAF11-202ENST00000369367 VPS8Q8N3P4 1428 aa12.93□□□□□ -0.34
SCAF11-202ENST00000369367 SPAG9O60271 1321 aaKnown RBP12.93□□□□□ -0.34
SCAF11-202ENST00000369367 ARXQ96QS3 562 aa12.93□□□□□ -0.34
SCAF11-202ENST00000369367 ANP32BQ92688 251 aaKnown RBP12.93□□□□□ -0.34
SCAF11-202ENST00000369367 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
SCAF11-202ENST00000369367 WIZO95785 1651 aa12.91□□□□□ -0.34
SCAF11-202ENST00000369367 PTPRGP23470 1445 aa12.91□□□□□ -0.34
SCAF11-202ENST00000369367 HDGFL2Q7Z4V5 671 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-202ENST00000369367 CHMP4AQ9BY43 222 aa12.9□□□□□ -0.34
SCAF11-202ENST00000369367 DCAF11Q8TEB1 546 aa12.9□□□□□ -0.34
SCAF11-202ENST00000369367 CCDC136Q96JN2 1154 aa12.9□□□□□ -0.34
SCAF11-202ENST00000369367 MS4A1P11836 297 aa12.9□□□□□ -0.35
SCAF11-202ENST00000369367 GTF3C3Q9Y5Q9 886 aa12.89□□□□□ -0.35
SCAF11-202ENST00000369367 KIF3BO15066 747 aa12.88□□□□□ -0.35
SCAF11-202ENST00000369367 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
SCAF11-202ENST00000369367 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
SCAF11-202ENST00000369367 EIF3AQ14152 1382 aaKnown RBP12.86□□□□□ -0.35
SCAF11-202ENST00000369367 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
SCAF11-202ENST00000369367 NUP155O75694 1391 aa12.85□□□□□ -0.35
SCAF11-202ENST00000369367 SETD5Q9C0A6 1442 aa12.85□□□□□ -0.35
SCAF11-202ENST00000369367 PKD2Q13563 968 aa12.84□□□□□ -0.35
SCAF11-202ENST00000369367 AEBP2Q6ZN18 517 aaPredicted RBP12.83□□□□□ -0.36
SCAF11-202ENST00000369367 CASC1Q6TDU7 716 aa12.83□□□□□ -0.36
SCAF11-202ENST00000369367 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
SCAF11-202ENST00000369367 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
SCAF11-202ENST00000369367 FKBP8Q14318 412 aa12.82□□□□□ -0.36
SCAF11-202ENST00000369367 U2SURPO15042 1029 aaKnown RBP12.81□□□□□ -0.36
SCAF11-202ENST00000369367 UACAQ9BZF9 1416 aa12.8□□□□□ -0.36
SCAF11-202ENST00000369367 MORC1Q86VD1 984 aa12.8□□□□□ -0.36
SCAF11-202ENST00000369367 RTF1Q92541 710 aaKnown RBP12.8□□□□□ -0.36
SCAF11-202ENST00000369367 CALD1Q05682 793 aaKnown RBP12.8□□□□□ -0.36
SCAF11-202ENST00000369367 CDK11BP21127 795 aaKnown RBP12.79□□□□□ -0.36
SCAF11-202ENST00000369367 CSB-PGBD3P0DP91 1061 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms