RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 CCER1Q8TC90 406 aaPredicted RBP22.46■■□□□ 1.19
SEMA6C-202ENST00000368912 TSHZ2Q9NRE2 1034 aa22.41■■□□□ 1.18
SEMA6C-202ENST00000368912 FAM50AQ14320 339 aaKnown RBP22.36■■□□□ 1.17
SEMA6C-202ENST00000368912 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
SEMA6C-202ENST00000368912 KANK4Q5T7N3 995 aaPredicted RBP22.33■■□□□ 1.17
SEMA6C-202ENST00000368912 GAPVD1Q14C86 1478 aa22.31■■□□□ 1.16
SEMA6C-202ENST00000368912 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
SEMA6C-202ENST00000368912 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
SEMA6C-202ENST00000368912 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.16
SEMA6C-202ENST00000368912 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
SEMA6C-202ENST00000368912 FHOD3Q2V2M9 1422 aa22.23■■□□□ 1.15
SEMA6C-202ENST00000368912 CCDC136Q96JN2 1154 aa22.22■■□□□ 1.15
SEMA6C-202ENST00000368912 SLC24A1O60721 1099 aa22.2■■□□□ 1.15
SEMA6C-202ENST00000368912 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
SEMA6C-202ENST00000368912 PRXQ9BXM0 1461 aa22.2■■□□□ 1.14
SEMA6C-202ENST00000368912 SUPT16HQ9Y5B9 1047 aaKnown RBP22.18■■□□□ 1.14
SEMA6C-202ENST00000368912 EIF5BO60841 1220 aaKnown RBP22.16■■□□□ 1.14
SEMA6C-202ENST00000368912 VPS8Q8N3P4 1428 aa22.1■■□□□ 1.13
SEMA6C-202ENST00000368912 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
SEMA6C-202ENST00000368912 ZNF777Q9ULD5 760 aaPredicted RBP22.1■■□□□ 1.13
SEMA6C-202ENST00000368912 BCANQ96GW7 911 aa22.08■■□□□ 1.13
SEMA6C-202ENST00000368912 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
SEMA6C-202ENST00000368912 MIER1Q8N108 512 aa22.07■■□□□ 1.12
SEMA6C-202ENST00000368912 SALL2Q9Y467 1007 aaPredicted RBP22.07■■□□□ 1.12
SEMA6C-202ENST00000368912 KIF21BO75037 1637 aa22.04■■□□□ 1.12
SEMA6C-202ENST00000368912 JPH4Q96JJ6 628 aa22.03■■□□□ 1.12
SEMA6C-202ENST00000368912 CHIC2Q9UKJ5 165 aa22.03■■□□□ 1.12
SEMA6C-202ENST00000368912 SNAPC4Q5SXM2 1469 aa22.01■■□□□ 1.11
SEMA6C-202ENST00000368912 MTUS2Q5JR59 1369 aa21.99■■□□□ 1.11
SEMA6C-202ENST00000368912 ARHGAP35Q9NRY4 1499 aa21.99■■□□□ 1.11
SEMA6C-202ENST00000368912 KCNH8Q96L42 1107 aa21.99■■□□□ 1.11
SEMA6C-202ENST00000368912 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
SEMA6C-202ENST00000368912 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
SEMA6C-202ENST00000368912 IFT140Q96RY7 1462 aa21.98■■□□□ 1.11
SEMA6C-202ENST00000368912 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.93■■□□□ 1.1
SEMA6C-202ENST00000368912 UBE2Q2Q8WVN8 375 aa21.93■■□□□ 1.1
SEMA6C-202ENST00000368912 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
SEMA6C-202ENST00000368912 MYT1LQ9UL68 1186 aa21.91■■□□□ 1.1
SEMA6C-202ENST00000368912 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
SEMA6C-202ENST00000368912 DEKP35659 375 aaKnown RBP21.9■■□□□ 1.1
SEMA6C-202ENST00000368912 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.1
SEMA6C-202ENST00000368912 RBM19Q9Y4C8 960 aaKnown RBP21.86■■□□□ 1.09
SEMA6C-202ENST00000368912 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
SEMA6C-202ENST00000368912 RRP7BPQ9NSQ0 103 aa21.82■■□□□ 1.08
SEMA6C-202ENST00000368912 TRIM52Q96A61 297 aa21.81■■□□□ 1.08
SEMA6C-202ENST00000368912 RTN4Q9NQC3 1192 aaKnown RBP21.79■■□□□ 1.08
SEMA6C-202ENST00000368912 CDK11AQ9UQ88 783 aaPredicted RBP21.78■■□□□ 1.08
SEMA6C-202ENST00000368912 WDR62O43379 1518 aa21.76■■□□□ 1.07
SEMA6C-202ENST00000368912 PLEKHG5O94827 1062 aa21.76■■□□□ 1.07
SEMA6C-202ENST00000368912 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
SEMA6C-202ENST00000368912 PLEKHD1A6NEE1 506 aa21.74■■□□□ 1.07
SEMA6C-202ENST00000368912 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
SEMA6C-202ENST00000368912 PKNOX2Q96KN3 472 aa21.7■■□□□ 1.06
SEMA6C-202ENST00000368912 EIF4G3O43432 1585 aaKnown RBP21.69■■□□□ 1.06
SEMA6C-202ENST00000368912 GRIN2AQ12879 1464 aa21.69■■□□□ 1.06
SEMA6C-202ENST00000368912 CCNB3Q8WWL7 1395 aa21.67■■□□□ 1.06
SEMA6C-202ENST00000368912 CARMIL2Q6F5E8 1435 aa21.65■■□□□ 1.06
SEMA6C-202ENST00000368912 PHLDB1Q86UU1 1377 aa21.65■■□□□ 1.06
SEMA6C-202ENST00000368912 ZNF644Q9H582 1327 aaPredicted RBP21.64■■□□□ 1.06
SEMA6C-202ENST00000368912 PRG4Q92954 1404 aaPredicted RBP21.64■■□□□ 1.06
SEMA6C-202ENST00000368912 CFDP1Q9UEE9 299 aaPredicted RBP21.64■■□□□ 1.06
SEMA6C-202ENST00000368912 ABCA5Q8WWZ7 1642 aa21.64■■□□□ 1.05
SEMA6C-202ENST00000368912 MSH5O43196 834 aa21.63■■□□□ 1.05
SEMA6C-202ENST00000368912 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
SEMA6C-202ENST00000368912 SYNJ2O15056 1496 aa21.62■■□□□ 1.05
SEMA6C-202ENST00000368912 FKBP8Q14318 412 aa21.62■■□□□ 1.05
SEMA6C-202ENST00000368912 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
SEMA6C-202ENST00000368912 PTPRGP23470 1445 aa21.61■■□□□ 1.05
SEMA6C-202ENST00000368912 CYB5RLQ6IPT4 315 aa21.61■■□□□ 1.05
SEMA6C-202ENST00000368912 CUL7Q14999 1698 aa21.61■■□□□ 1.05
SEMA6C-202ENST00000368912 NPM1P06748 294 aaKnown RBP eCLIP21.59■■□□□ 1.05
SEMA6C-202ENST00000368912 ERICH6BQ5W0A0 696 aa21.58■■□□□ 1.05
SEMA6C-202ENST00000368912 PODXL2Q9NZ53 605 aa21.58■■□□□ 1.05
SEMA6C-202ENST00000368912 NBR1Q14596 966 aa21.58■■□□□ 1.04
SEMA6C-202ENST00000368912 PLB1Q6P1J6 1458 aa21.57■■□□□ 1.04
SEMA6C-202ENST00000368912 NEFLP07196 543 aa21.56■■□□□ 1.04
SEMA6C-202ENST00000368912 KIAA0586Q9BVV6 1533 aa21.56■■□□□ 1.04
SEMA6C-202ENST00000368912 IQGAP2Q13576 1575 aa21.56■■□□□ 1.04
SEMA6C-202ENST00000368912 CDK13Q14004 1512 aaKnown RBP21.56■■□□□ 1.04
SEMA6C-202ENST00000368912 PCF11O94913 1555 aaKnown RBP21.54■■□□□ 1.04
SEMA6C-202ENST00000368912 ADAMTS12P58397 1594 aa21.54■■□□□ 1.04
SEMA6C-202ENST00000368912 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
SEMA6C-202ENST00000368912 SIN3AQ96ST3 1273 aa21.52■■□□□ 1.04
SEMA6C-202ENST00000368912 PBRM1Q86U86 1689 aa21.52■■□□□ 1.04
SEMA6C-202ENST00000368912 LRRC9Q6ZRR7 1453 aa21.52■■□□□ 1.04
SEMA6C-202ENST00000368912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.52■■□□□ 1.047e-6■□□□□ 10.8
SEMA6C-202ENST00000368912 CASKIN1Q8WXD9 1431 aa21.52■■□□□ 1.03
SEMA6C-202ENST00000368912 DAXXQ9UER7 740 aaPredicted RBP21.51■■□□□ 1.03
SEMA6C-202ENST00000368912 FOXD1Q16676 465 aa21.5■■□□□ 1.03
SEMA6C-202ENST00000368912 HNRNPMP52272 730 aaKnown RBP eCLIP21.48■■□□□ 1.03
SEMA6C-202ENST00000368912 IL27Q8NEV9 243 aa21.45■■□□□ 1.02
SEMA6C-202ENST00000368912 HIRIP3Q9BW71 556 aaPredicted RBP21.45■■□□□ 1.02
SEMA6C-202ENST00000368912 ZNF326Q5BKZ1 582 aaKnown RBP21.45■■□□□ 1.02
SEMA6C-202ENST00000368912 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
SEMA6C-202ENST00000368912 CNGB1Q14028 1251 aaPredicted RBP21.42■■□□□ 1.02
SEMA6C-202ENST00000368912 TSPY4P0CV99 314 aa21.41■■□□□ 1.02
SEMA6C-202ENST00000368912 TSPY10P0CW01 314 aa21.41■■□□□ 1.02
SEMA6C-202ENST00000368912 TIAM1Q13009 1591 aa21.4■■□□□ 1.02
SEMA6C-202ENST00000368912 EFCAB5A4FU69 1503 aa21.4■■□□□ 1.02
SEMA6C-202ENST00000368912 RAB3GAP2Q9H2M9 1393 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms