RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ERCC6L2Q5T890 1561 aa15.03■□□□□ -0
SNX27-201ENST00000368838 CEP170Q5SW79 1584 aa15.02□□□□□ -0.01
SNX27-201ENST00000368838 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
SNX27-201ENST00000368838 SHROOM2Q13796 1616 aa14.93□□□□□ -0.02
SNX27-201ENST00000368838 PPP4R3CPQ6ZMV5 832 aa14.92□□□□□ -0.02
SNX27-201ENST00000368838 ERICH3Q5RHP9 1530 aa14.92□□□□□ -0.02
SNX27-201ENST00000368838 NUP160Q12769 1436 aa14.92□□□□□ -0.02
SNX27-201ENST00000368838 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
SNX27-201ENST00000368838 FHAD1B1AJZ9 1412 aa14.91□□□□□ -0.02
SNX27-201ENST00000368838 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
SNX27-201ENST00000368838 KIF13AQ9H1H9 1805 aa14.84□□□□□ -0.03
SNX27-201ENST00000368838 RUSC2Q8N2Y8 1516 aa14.84□□□□□ -0.03
SNX27-201ENST00000368838 PRG4Q92954 1404 aaPredicted RBP14.82□□□□□ -0.04
SNX27-201ENST00000368838 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
SNX27-201ENST00000368838 CUL7Q14999 1698 aa14.77□□□□□ -0.04
SNX27-201ENST00000368838 JPH4Q96JJ6 628 aa14.77□□□□□ -0.04
SNX27-201ENST00000368838 MSH5O43196 834 aa14.72□□□□□ -0.05
SNX27-201ENST00000368838 KIF27Q86VH2 1401 aa14.72□□□□□ -0.05
SNX27-201ENST00000368838 TSPOAP1O95153 1857 aa14.72□□□□□ -0.05
SNX27-201ENST00000368838 ADCY10Q96PN6 1610 aa14.72□□□□□ -0.05
SNX27-201ENST00000368838 IGF1RP08069 1367 aa14.71□□□□□ -0.05
SNX27-201ENST00000368838 TTBK1Q5TCY1 1321 aaPredicted RBP14.69□□□□□ -0.06
SNX27-201ENST00000368838 KIAA0586Q9BVV6 1533 aa14.67□□□□□ -0.06
SNX27-201ENST00000368838 DIP2BQ9P265 1576 aa14.64□□□□□ -0.07
SNX27-201ENST00000368838 CARMIL1Q5VZK9 1371 aa14.62□□□□□ -0.07
SNX27-201ENST00000368838 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
SNX27-201ENST00000368838 MAPKBP1O60336 1514 aa14.61□□□□□ -0.07
SNX27-201ENST00000368838 FAM69CQ0P6D2 419 aa14.61□□□□□ -0.07
SNX27-201ENST00000368838 IQGAP2Q13576 1575 aa14.61□□□□□ -0.07
SNX27-201ENST00000368838 ABCC10Q5T3U5 1492 aa14.6□□□□□ -0.07
SNX27-201ENST00000368838 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
SNX27-201ENST00000368838 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
SNX27-201ENST00000368838 PTPRGP23470 1445 aa14.56□□□□□ -0.08
SNX27-201ENST00000368838 CTTNBP2Q8WZ74 1663 aa14.55□□□□□ -0.08
SNX27-201ENST00000368838 KDM6BO15054 1643 aa14.53□□□□□ -0.08
SNX27-201ENST00000368838 CARMIL2Q6F5E8 1435 aa14.53□□□□□ -0.08
SNX27-201ENST00000368838 TNIKQ9UKE5 1360 aa14.52□□□□□ -0.09
SNX27-201ENST00000368838 DISP1Q96F81 1524 aa14.51□□□□□ -0.09
SNX27-201ENST00000368838 RAPGEF2Q9Y4G8 1499 aa14.51□□□□□ -0.09
SNX27-201ENST00000368838 PPRC1Q5VV67 1664 aaKnown RBP14.5□□□□□ -0.09
SNX27-201ENST00000368838 ABCC2Q92887 1545 aa14.49□□□□□ -0.09
SNX27-201ENST00000368838 KIAA0556O60303 1618 aa14.48□□□□□ -0.09
SNX27-201ENST00000368838 ZCCHC11Q5TAX3 1644 aaKnown RBP14.47□□□□□ -0.09
SNX27-201ENST00000368838 EEA1Q15075 1411 aa14.47□□□□□ -0.09
SNX27-201ENST00000368838 UGGT2Q9NYU1 1516 aa14.47□□□□□ -0.09
SNX27-201ENST00000368838 ASXL2Q76L83 1435 aa14.46□□□□□ -0.1
SNX27-201ENST00000368838 UACAQ9BZF9 1416 aa14.44□□□□□ -0.1
SNX27-201ENST00000368838 ZBTB22O15209 634 aa14.42□□□□□ -0.1
SNX27-201ENST00000368838 UHRF1BP1LA0JNW5 1464 aa14.42□□□□□ -0.1
SNX27-201ENST00000368838 PLB1Q6P1J6 1458 aa14.41□□□□□ -0.1
SNX27-201ENST00000368838 GLI2P10070 1586 aa14.4□□□□□ -0.1
SNX27-201ENST00000368838 MAP3K4Q9Y6R4 1608 aa14.4□□□□□ -0.1
SNX27-201ENST00000368838 KDM5BQ9UGL1 1544 aa14.38□□□□□ -0.11
SNX27-201ENST00000368838 EPRSP07814 1512 aaKnown RBP14.37□□□□□ -0.11
SNX27-201ENST00000368838 KDM4FA0A1W2PPD8 638 aa14.34□□□□□ -0.11
SNX27-201ENST00000368838 ABCA8O94911 1581 aa14.33□□□□□ -0.11
SNX27-201ENST00000368838 PRXQ9BXM0 1461 aa14.33□□□□□ -0.12
SNX27-201ENST00000368838 GOLGA3Q08378 1498 aa14.32□□□□□ -0.12
SNX27-201ENST00000368838 ARID3CA6NKF2 412 aa14.32□□□□□ -0.12
SNX27-201ENST00000368838 P3H3Q8IVL6 736 aa14.32□□□□□ -0.12
SNX27-201ENST00000368838 COL17A1Q9UMD9 1497 aaPredicted RBP14.32□□□□□ -0.12
SNX27-201ENST00000368838 WDR7Q9Y4E6 1490 aa14.31□□□□□ -0.12
SNX27-201ENST00000368838 CFAP43Q8NDM7 1665 aa14.29□□□□□ -0.12
SNX27-201ENST00000368838 KCNH8Q96L42 1107 aa14.29□□□□□ -0.12
SNX27-201ENST00000368838 TEX14Q8IWB6 1497 aa14.27□□□□□ -0.13
SNX27-201ENST00000368838 RANGAP1P46060 587 aaPredicted RBP14.26□□□□□ -0.13
SNX27-201ENST00000368838 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
SNX27-201ENST00000368838 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
SNX27-201ENST00000368838 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
SNX27-201ENST00000368838 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
SNX27-201ENST00000368838 RAPGEF6Q8TEU7 1601 aa14.22□□□□□ -0.13
SNX27-201ENST00000368838 CD109Q6YHK3 1445 aa14.21□□□□□ -0.13
SNX27-201ENST00000368838 KIF21BO75037 1637 aa14.2□□□□□ -0.14
SNX27-201ENST00000368838 ATP10BO94823 1461 aa14.19□□□□□ -0.14
SNX27-201ENST00000368838 MAGI3Q5TCQ9 1506 aa14.18□□□□□ -0.14
SNX27-201ENST00000368838 ABCA9Q8IUA7 1624 aa14.16□□□□□ -0.14
SNX27-201ENST00000368838 FHOD3Q2V2M9 1422 aa14.15□□□□□ -0.14
SNX27-201ENST00000368838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.15
SNX27-201ENST00000368838 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.15
SNX27-201ENST00000368838 NUP153P49790 1475 aaKnown RBP14.12□□□□□ -0.15
SNX27-201ENST00000368838 HECW2Q9P2P5 1572 aa14.1□□□□□ -0.15
SNX27-201ENST00000368838 LOC105371045A0A1W2PR82 267 aa14.09□□□□□ -0.15
SNX27-201ENST00000368838 ARAP3Q8WWN8 1544 aa14.07□□□□□ -0.16
SNX27-201ENST00000368838 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
SNX27-201ENST00000368838 FRMPD1Q5SYB0 1578 aa14.05□□□□□ -0.16
SNX27-201ENST00000368838 RAPGEF3O95398 923 aa14.05□□□□□ -0.16
SNX27-201ENST00000368838 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
SNX27-201ENST00000368838 EFCAB5A4FU69 1503 aa14.05□□□□□ -0.16
SNX27-201ENST00000368838 RICTORQ6R327 1708 aa14.04□□□□□ -0.16
SNX27-201ENST00000368838 CDK13Q14004 1512 aaKnown RBP14.04□□□□□ -0.16
SNX27-201ENST00000368838 TTC37Q6PGP7 1564 aa14.04□□□□□ -0.16
SNX27-201ENST00000368838 LRRIQ1Q96JM4 1722 aa14.02□□□□□ -0.17
SNX27-201ENST00000368838 UBTFP17480 764 aaKnown RBP14.01□□□□□ -0.17
SNX27-201ENST00000368838 NEO1Q92859 1461 aa14.01□□□□□ -0.17
SNX27-201ENST00000368838 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.01□□□□□ -0.17
SNX27-201ENST00000368838 ADAMTSL3P82987 1691 aa14□□□□□ -0.17
SNX27-201ENST00000368838 PLEKHD1A6NEE1 506 aa13.99□□□□□ -0.17
SNX27-201ENST00000368838 ATP1B4Q9UN42 357 aaPredicted RBP13.99□□□□□ -0.17
SNX27-201ENST00000368838 MADDQ8WXG6 1647 aa13.99□□□□□ -0.17
SNX27-201ENST00000368838 BCORL1Q5H9F3 1711 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms