RNA–Protein interactions for RNA: ENST00000368256.3

CCT3-202, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 1,063 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-202ENST00000368256 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
CCT3-202ENST00000368256 TARBP1Q13395 1621 aaKnown RBP18.1■□□□□ 0.49
CCT3-202ENST00000368256 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
CCT3-202ENST00000368256 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.49
CCT3-202ENST00000368256 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
CCT3-202ENST00000368256 POLA1P09884 1462 aaPredicted RBP18.05■□□□□ 0.48
CCT3-202ENST00000368256 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.475e-9■■■■□ 26.3
CCT3-202ENST00000368256 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
CCT3-202ENST00000368256 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
CCT3-202ENST00000368256 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
CCT3-202ENST00000368256 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
CCT3-202ENST00000368256 CHD1O14646 1710 aa17.96■□□□□ 0.47
CCT3-202ENST00000368256 CUX1P39880 1505 aa17.96■□□□□ 0.47
CCT3-202ENST00000368256 FBLN2P98095 1184 aa17.94■□□□□ 0.46
CCT3-202ENST00000368256 SOGA1O94964 1423 aa17.93■□□□□ 0.46
CCT3-202ENST00000368256 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
CCT3-202ENST00000368256 ARHGEF11O15085 1522 aa17.9■□□□□ 0.46
CCT3-202ENST00000368256 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
CCT3-202ENST00000368256 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
CCT3-202ENST00000368256 MKRN4PQ13434 485 aaPredicted RBP17.87■□□□□ 0.45
CCT3-202ENST00000368256 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
CCT3-202ENST00000368256 SNAPC4Q5SXM2 1469 aa17.82■□□□□ 0.44
CCT3-202ENST00000368256 AKT1S1Q96B36 256 aa17.77■□□□□ 0.44
CCT3-202ENST00000368256 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
CCT3-202ENST00000368256 MAGI1Q96QZ7 1491 aaPredicted RBP17.76■□□□□ 0.43
CCT3-202ENST00000368256 PBRM1Q86U86 1689 aa17.76■□□□□ 0.43
CCT3-202ENST00000368256 CLASP1Q7Z460 1538 aa17.76■□□□□ 0.43
CCT3-202ENST00000368256 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
CCT3-202ENST00000368256 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
CCT3-202ENST00000368256 ABCA5Q8WWZ7 1642 aa17.74■□□□□ 0.43
CCT3-202ENST00000368256 GAPVD1Q14C86 1478 aa17.71■□□□□ 0.43
CCT3-202ENST00000368256 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
CCT3-202ENST00000368256 SYNJ2O15056 1496 aa17.7■□□□□ 0.42
CCT3-202ENST00000368256 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
CCT3-202ENST00000368256 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
CCT3-202ENST00000368256 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
CCT3-202ENST00000368256 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
CCT3-202ENST00000368256 SYNJ1O43426 1573 aa17.68■□□□□ 0.42
CCT3-202ENST00000368256 TOP2BQ02880 1626 aa17.68■□□□□ 0.42
CCT3-202ENST00000368256 CHMP7Q8WUX9 453 aaPredicted RBP17.67■□□□□ 0.42
CCT3-202ENST00000368256 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
CCT3-202ENST00000368256 REM2Q8IYK8 340 aaPredicted RBP17.59■□□□□ 0.41
CCT3-202ENST00000368256 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
CCT3-202ENST00000368256 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
CCT3-202ENST00000368256 ZNF692Q9BU19 519 aaPredicted RBP17.54■□□□□ 0.4
CCT3-202ENST00000368256 CEP170Q5SW79 1584 aa17.53■□□□□ 0.4
CCT3-202ENST00000368256 CHRDL2Q6WN34 429 aa17.52■□□□□ 0.4
CCT3-202ENST00000368256 NUP160Q12769 1436 aa17.52■□□□□ 0.4
CCT3-202ENST00000368256 ERCC6L2Q5T890 1561 aa17.51■□□□□ 0.39
CCT3-202ENST00000368256 SSUH2Q9Y2M2 353 aa17.51■□□□□ 0.39
CCT3-202ENST00000368256 ERICH3Q5RHP9 1530 aa17.51■□□□□ 0.39
CCT3-202ENST00000368256 FHAD1B1AJZ9 1412 aa17.49■□□□□ 0.39
CCT3-202ENST00000368256 POTEHQ6S545 545 aa17.49■□□□□ 0.39
CCT3-202ENST00000368256 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
CCT3-202ENST00000368256 PITPNM1O00562 1244 aa17.39■□□□□ 0.37
CCT3-202ENST00000368256 RUSC2Q8N2Y8 1516 aa17.33■□□□□ 0.37
CCT3-202ENST00000368256 IGF1RP08069 1367 aa17.32■□□□□ 0.36
CCT3-202ENST00000368256 JPH4Q96JJ6 628 aa17.3■□□□□ 0.36
CCT3-202ENST00000368256 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
CCT3-202ENST00000368256 SPDYE1Q8NFV5 336 aaPredicted RBP17.28■□□□□ 0.36
CCT3-202ENST00000368256 KIF27Q86VH2 1401 aa17.27■□□□□ 0.35
CCT3-202ENST00000368256 CUL7Q14999 1698 aa17.26■□□□□ 0.35
CCT3-202ENST00000368256 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
CCT3-202ENST00000368256 KIAA0586Q9BVV6 1533 aa17.21■□□□□ 0.35
CCT3-202ENST00000368256 KIF13AQ9H1H9 1805 aa17.21■□□□□ 0.35
CCT3-202ENST00000368256 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
CCT3-202ENST00000368256 PIP4P2Q8N4L2 257 aa17.19■□□□□ 0.34
CCT3-202ENST00000368256 FXR2P51116 673 aaKnown RBP eCLIP17.17■□□□□ 0.344e-6■■□□□ 13.5
CCT3-202ENST00000368256 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
CCT3-202ENST00000368256 ADCY10Q96PN6 1610 aa17.15■□□□□ 0.34
CCT3-202ENST00000368256 MAPKBP1O60336 1514 aa17.1■□□□□ 0.33
CCT3-202ENST00000368256 ABCC10Q5T3U5 1492 aa17.06■□□□□ 0.32
CCT3-202ENST00000368256 IQGAP2Q13576 1575 aa17.05■□□□□ 0.32
CCT3-202ENST00000368256 DIP2BQ9P265 1576 aa17.05■□□□□ 0.32
CCT3-202ENST00000368256 DISP1Q96F81 1524 aa17.02■□□□□ 0.32
CCT3-202ENST00000368256 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
CCT3-202ENST00000368256 PTPRGP23470 1445 aa17.01■□□□□ 0.31
CCT3-202ENST00000368256 TNIKQ9UKE5 1360 aa17■□□□□ 0.31
CCT3-202ENST00000368256 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
CCT3-202ENST00000368256 PRR29P0C7W0 189 aa16.99■□□□□ 0.31
CCT3-202ENST00000368256 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
CCT3-202ENST00000368256 UGGT2Q9NYU1 1516 aa16.98■□□□□ 0.31
CCT3-202ENST00000368256 CARMIL2Q6F5E8 1435 aa16.97■□□□□ 0.31
CCT3-202ENST00000368256 ABCC2Q92887 1545 aa16.95■□□□□ 0.3
CCT3-202ENST00000368256 UHRF1BP1LA0JNW5 1464 aa16.94■□□□□ 0.3
CCT3-202ENST00000368256 PRKAR2AP13861 404 aaKnown RBP16.94■□□□□ 0.3
CCT3-202ENST00000368256 TSPOAP1O95153 1857 aa16.94■□□□□ 0.3
CCT3-202ENST00000368256 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
CCT3-202ENST00000368256 KIAA0556O60303 1618 aa16.92■□□□□ 0.3
CCT3-202ENST00000368256 CTTNBP2Q8WZ74 1663 aa16.92■□□□□ 0.3
CCT3-202ENST00000368256 PROM2Q8N271 834 aa16.92■□□□□ 0.3
CCT3-202ENST00000368256 TTBK1Q5TCY1 1321 aaPredicted RBP16.92■□□□□ 0.3
CCT3-202ENST00000368256 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
CCT3-202ENST00000368256 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
CCT3-202ENST00000368256 PPRC1Q5VV67 1664 aaKnown RBP16.89■□□□□ 0.29
CCT3-202ENST00000368256 ASXL2Q76L83 1435 aa16.87■□□□□ 0.29
CCT3-202ENST00000368256 KDM5BQ9UGL1 1544 aa16.87■□□□□ 0.29
CCT3-202ENST00000368256 GLI2P10070 1586 aa16.87■□□□□ 0.29
CCT3-202ENST00000368256 PLB1Q6P1J6 1458 aa16.85■□□□□ 0.29
CCT3-202ENST00000368256 KDM6BO15054 1643 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms