RNA–Protein interactions for RNA: ENST00000368256.3

CCT3-202, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 1,063 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-202ENST00000368256 AEBP2Q6ZN18 517 aaPredicted RBP31.95■■■□□ 2.71
CCT3-202ENST00000368256 CHIC1Q5VXU3 224 aa30.76■■■□□ 2.51
CCT3-202ENST00000368256 SENP3Q9H4L4 574 aaPredicted RBP27.2■■□□□ 1.94
CCT3-202ENST00000368256 PHF23Q9BUL5 403 aaPredicted RBP27.01■■□□□ 1.91
CCT3-202ENST00000368256 FOXD1Q16676 465 aa25.29■■□□□ 1.64
CCT3-202ENST00000368256 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
CCT3-202ENST00000368256 PLPPR3Q6T4P5 718 aa24.77■■□□□ 1.56
CCT3-202ENST00000368256 PPP6R1Q9UPN7 881 aa23.98■■□□□ 1.43
CCT3-202ENST00000368256 ADRA2BP18089 450 aa23.91■■□□□ 1.42
CCT3-202ENST00000368256 PIAS4Q8N2W9 510 aaPredicted RBP23.72■■□□□ 1.39
CCT3-202ENST00000368256 MSH5O43196 834 aa23.51■■□□□ 1.35
CCT3-202ENST00000368256 CCDC180Q9P1Z9 1646 aa22.23■■□□□ 1.15
CCT3-202ENST00000368256 POTEDQ86YR6 584 aa22.21■■□□□ 1.15
CCT3-202ENST00000368256 ABCC9O60706 1549 aa22.12■■□□□ 1.13
CCT3-202ENST00000368256 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
CCT3-202ENST00000368256 MAPK8IP2Q13387 824 aaPredicted RBP21.83■■□□□ 1.09
CCT3-202ENST00000368256 PPP4R3CPQ6ZMV5 832 aa21.76■■□□□ 1.07
CCT3-202ENST00000368256 DMRT2Q9Y5R5 561 aa21.64■■□□□ 1.05
CCT3-202ENST00000368256 CNKSR2Q8WXI2 1034 aa21.26■□□□□ 0.99
CCT3-202ENST00000368256 RB1CC1Q8TDY2 1594 aa21.08■□□□□ 0.97
CCT3-202ENST00000368256 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
CCT3-202ENST00000368256 HOXD11P31277 338 aaPredicted RBP21.02■□□□□ 0.96
CCT3-202ENST00000368256 NACADO15069 1562 aa20.97■□□□□ 0.95
CCT3-202ENST00000368256 RNF216Q9NWF9 866 aaPredicted RBP20.97■□□□□ 0.95
CCT3-202ENST00000368256 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
CCT3-202ENST00000368256 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
CCT3-202ENST00000368256 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
CCT3-202ENST00000368256 UNC13AQ9UPW8 1703 aa20.75■□□□□ 0.91
CCT3-202ENST00000368256 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
CCT3-202ENST00000368256 KCNA4P22459 653 aa20.72■□□□□ 0.91
CCT3-202ENST00000368256 DCAF8L1A6NGE4 600 aa20.68■□□□□ 0.9
CCT3-202ENST00000368256 PABPN1Q86U42 306 aaKnown RBP eCLIP20.6■□□□□ 0.89
CCT3-202ENST00000368256 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
CCT3-202ENST00000368256 BICRAQ9NZM4 1560 aa20.57■□□□□ 0.88
CCT3-202ENST00000368256 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
CCT3-202ENST00000368256 SCRIBQ14160 1630 aa20.23■□□□□ 0.83
CCT3-202ENST00000368256 SHROOM4Q9ULL8 1493 aa20.19■□□□□ 0.82
CCT3-202ENST00000368256 RNF39Q9H2S5 420 aa20.11■□□□□ 0.81
CCT3-202ENST00000368256 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
CCT3-202ENST00000368256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20■□□□□ 0.794e-11■■□□□ 12.1
CCT3-202ENST00000368256 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
CCT3-202ENST00000368256 CECR2Q9BXF3 1484 aa19.92■□□□□ 0.78
CCT3-202ENST00000368256 CACNB1Q02641 598 aaPredicted RBP19.89■□□□□ 0.77
CCT3-202ENST00000368256 C1QBPQ07021 282 aaKnown RBP19.85■□□□□ 0.77
CCT3-202ENST00000368256 SLC4A2P04920 1241 aa19.72■□□□□ 0.75
CCT3-202ENST00000368256 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
CCT3-202ENST00000368256 U3KPZ7 1027 aaPredicted RBP19.63■□□□□ 0.73
CCT3-202ENST00000368256 NCAPD3P42695 1498 aa19.38■□□□□ 0.69
CCT3-202ENST00000368256 SMARCA4P51532 1647 aa19.33■□□□□ 0.69
CCT3-202ENST00000368256 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.68
CCT3-202ENST00000368256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
CCT3-202ENST00000368256 HNRNPUL2Q1KMD3 747 aaKnown RBP19.24■□□□□ 0.67
CCT3-202ENST00000368256 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
CCT3-202ENST00000368256 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
CCT3-202ENST00000368256 FOXD4L1Q9NU39 408 aa19.22■□□□□ 0.67
CCT3-202ENST00000368256 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
CCT3-202ENST00000368256 BAZ1AQ9NRL2 1556 aaPredicted RBP19.21■□□□□ 0.67
CCT3-202ENST00000368256 MYCNP04198 464 aaPredicted RBP19.19■□□□□ 0.66
CCT3-202ENST00000368256 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
CCT3-202ENST00000368256 CAPN15O75808 1086 aa19.15■□□□□ 0.66
CCT3-202ENST00000368256 SAMD1Q6SPF0 538 aaPredicted RBP19.15■□□□□ 0.66
CCT3-202ENST00000368256 APLP2Q06481 763 aa19.14■□□□□ 0.65
CCT3-202ENST00000368256 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
CCT3-202ENST00000368256 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
CCT3-202ENST00000368256 ZBTB22O15209 634 aa19.07■□□□□ 0.64
CCT3-202ENST00000368256 NESP48681 1621 aa19.07■□□□□ 0.64
CCT3-202ENST00000368256 CUX2O14529 1486 aa19.03■□□□□ 0.64
CCT3-202ENST00000368256 ERCC6Q03468 1493 aa19.02■□□□□ 0.63
CCT3-202ENST00000368256 DSG3P32926 999 aa18.97■□□□□ 0.63
CCT3-202ENST00000368256 DNAJC5Q9H3Z4 198 aa18.96■□□□□ 0.63
CCT3-202ENST00000368256 ZNF219Q9P2Y4 722 aaPredicted RBP18.95■□□□□ 0.62
CCT3-202ENST00000368256 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
CCT3-202ENST00000368256 WIZO95785 1651 aa18.92■□□□□ 0.62
CCT3-202ENST00000368256 LAMC3Q9Y6N6 1575 aa18.91■□□□□ 0.62
CCT3-202ENST00000368256 THOC2Q8NI27 1593 aaKnown RBP18.88■□□□□ 0.61
CCT3-202ENST00000368256 KIF21AQ7Z4S6 1674 aa18.84■□□□□ 0.61
CCT3-202ENST00000368256 CADPSQ9ULU8 1353 aa18.77■□□□□ 0.6
CCT3-202ENST00000368256 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
CCT3-202ENST00000368256 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
CCT3-202ENST00000368256 ABCB7O75027 752 aa18.73■□□□□ 0.59
CCT3-202ENST00000368256 ATF5Q9Y2D1 282 aaPredicted RBP18.7■□□□□ 0.58
CCT3-202ENST00000368256 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.57
CCT3-202ENST00000368256 WDR62O43379 1518 aa18.61■□□□□ 0.57
CCT3-202ENST00000368256 MRC2Q9UBG0 1479 aa18.61■□□□□ 0.57
CCT3-202ENST00000368256 ATXN8OSP0DMR3 200 aa18.61■□□□□ 0.57
CCT3-202ENST00000368256 CFTRP13569 1480 aa18.59■□□□□ 0.57
CCT3-202ENST00000368256 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
CCT3-202ENST00000368256 POLA2Q14181 598 aa18.55■□□□□ 0.56
CCT3-202ENST00000368256 FANCD2Q9BXW9 1451 aa18.54■□□□□ 0.56
CCT3-202ENST00000368256 CEP164Q9UPV0 1460 aa18.53■□□□□ 0.56
CCT3-202ENST00000368256 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
CCT3-202ENST00000368256 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
CCT3-202ENST00000368256 CCDC88BA6NC98 1476 aa18.44■□□□□ 0.54
CCT3-202ENST00000368256 URB2Q14146 1524 aaKnown RBP18.44■□□□□ 0.54
CCT3-202ENST00000368256 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
CCT3-202ENST00000368256 ZBTB12Q9Y330 459 aaPredicted RBP18.22■□□□□ 0.51
CCT3-202ENST00000368256 ZNF608Q9ULD9 1512 aaPredicted RBP18.19■□□□□ 0.5
CCT3-202ENST00000368256 IFT140Q96RY7 1462 aa18.18■□□□□ 0.5
CCT3-202ENST00000368256 DNMBPQ6XZF7 1577 aa18.16■□□□□ 0.5
CCT3-202ENST00000368256 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms