RNA–Protein interactions for RNA: ENST00000366663.9

C1orf198-201, Transcript of chromosome 1 open reading frame 198, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C1orf198, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf198-201ENST00000366663 TIMELESSQ9UNS1 1208 aa26■■□□□ 1.75
C1orf198-201ENST00000366663 PAK3O75914 559 aaPredicted RBP25.98■■□□□ 1.75
C1orf198-201ENST00000366663 MRS2Q9HD23 443 aa25.97■■□□□ 1.75
C1orf198-201ENST00000366663 SOGA1O94964 1423 aa25.97■■□□□ 1.75
C1orf198-201ENST00000366663 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
C1orf198-201ENST00000366663 FANCIQ9NVI1 1328 aa25.92■■□□□ 1.74
C1orf198-201ENST00000366663 ZNF326Q5BKZ1 582 aaKnown RBP25.91■■□□□ 1.74
C1orf198-201ENST00000366663 UNC13AQ9UPW8 1703 aa25.9■■□□□ 1.74
C1orf198-201ENST00000366663 ARID4BQ4LE39 1312 aaPredicted RBP25.86■■□□□ 1.73
C1orf198-201ENST00000366663 GLIPR1L2Q4G1C9 344 aa25.86■■□□□ 1.73
C1orf198-201ENST00000366663 P3H3Q8IVL6 736 aa25.86■■□□□ 1.73
C1orf198-201ENST00000366663 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
C1orf198-201ENST00000366663 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
C1orf198-201ENST00000366663 RUSC2Q8N2Y8 1516 aa25.82■■□□□ 1.72
C1orf198-201ENST00000366663 CLIP1P30622 1438 aa25.79■■□□□ 1.72
C1orf198-201ENST00000366663 TONSLQ96HA7 1378 aa25.78■■□□□ 1.72
C1orf198-201ENST00000366663 BICRAQ9NZM4 1560 aa25.77■■□□□ 1.72
C1orf198-201ENST00000366663 ERICH6BQ5W0A0 696 aa25.73■■□□□ 1.71
C1orf198-201ENST00000366663 IPO9Q96P70 1041 aaKnown RBP25.72■■□□□ 1.71
C1orf198-201ENST00000366663 TNIKQ9UKE5 1360 aa25.72■■□□□ 1.71
C1orf198-201ENST00000366663 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.71
C1orf198-201ENST00000366663 BRPF3Q9ULD4 1205 aa25.7■■□□□ 1.7
C1orf198-201ENST00000366663 NAP1L5Q96NT1 182 aaPredicted RBP25.67■■□□□ 1.7
C1orf198-201ENST00000366663 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
C1orf198-201ENST00000366663 SLC4A3P48751 1232 aa25.64■■□□□ 1.7
C1orf198-201ENST00000366663 VSIG10Q8N0Z9 540 aa25.64■■□□□ 1.69
C1orf198-201ENST00000366663 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
C1orf198-201ENST00000366663 DHX57Q6P158 1386 aaKnown RBP25.62■■□□□ 1.69
C1orf198-201ENST00000366663 CCER2I3L3R5 266 aa25.6■■□□□ 1.69
C1orf198-201ENST00000366663 PPM1GO15355 546 aaPredicted RBP25.56■■□□□ 1.68
C1orf198-201ENST00000366663 TMC1Q8TDI8 760 aa25.49■■□□□ 1.67
C1orf198-201ENST00000366663 PKNOX2Q96KN3 472 aa25.49■■□□□ 1.67
C1orf198-201ENST00000366663 EIF4G1Q04637 1599 aaKnown RBP25.47■■□□□ 1.67
C1orf198-201ENST00000366663 CHIC2Q9UKJ5 165 aa25.45■■□□□ 1.67
C1orf198-201ENST00000366663 GOLGA3Q08378 1498 aa25.42■■□□□ 1.66
C1orf198-201ENST00000366663 ARID3CA6NKF2 412 aa25.41■■□□□ 1.66
C1orf198-201ENST00000366663 ARID3AQ99856 593 aa25.39■■□□□ 1.66
C1orf198-201ENST00000366663 RGS3P49796 1198 aa25.38■■□□□ 1.65
C1orf198-201ENST00000366663 EIF4G2P78344 907 aaKnown RBP eCLIP25.36■■□□□ 1.65
C1orf198-201ENST00000366663 GSE1Q14687 1217 aa25.34■■□□□ 1.65
C1orf198-201ENST00000366663 UBE2Q2Q8WVN8 375 aa25.33■■□□□ 1.65
C1orf198-201ENST00000366663 EEA1Q15075 1411 aa25.32■■□□□ 1.64
C1orf198-201ENST00000366663 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
C1orf198-201ENST00000366663 RAB3GAP2Q9H2M9 1393 aa25.31■■□□□ 1.64
C1orf198-201ENST00000366663 PPP1R15AO75807 674 aaPredicted RBP25.29■■□□□ 1.64
C1orf198-201ENST00000366663 DDRGK1Q96HY6 314 aa25.29■■□□□ 1.64
C1orf198-201ENST00000366663 GZF1Q9H116 711 aaPredicted RBP25.29■■□□□ 1.64
C1orf198-201ENST00000366663 SPRYD3Q8NCJ5 442 aa25.27■■□□□ 1.64
C1orf198-201ENST00000366663 CCDC184Q52MB2 194 aa25.25■■□□□ 1.63
C1orf198-201ENST00000366663 CCNB3Q8WWL7 1395 aa25.25■■□□□ 1.63
C1orf198-201ENST00000366663 HSPA5P11021 654 aaKnown RBP25.24■■□□□ 1.63
C1orf198-201ENST00000366663 FRAT1Q92837 279 aaPredicted RBP25.23■■□□□ 1.63
C1orf198-201ENST00000366663 SLKQ9H2G2 1235 aaPredicted RBP25.23■■□□□ 1.63
C1orf198-201ENST00000366663 RAPGEF2Q9Y4G8 1499 aa25.23■■□□□ 1.63
C1orf198-201ENST00000366663 RRP7BPQ9NSQ0 103 aa25.23■■□□□ 1.63
C1orf198-201ENST00000366663 PDE4AP27815 886 aa25.22■■□□□ 1.63
C1orf198-201ENST00000366663 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
C1orf198-201ENST00000366663 A0A0U1RQG5 324 aaPredicted RBP25.21■■□□□ 1.63
C1orf198-201ENST00000366663 VPS8Q8N3P4 1428 aa25.21■■□□□ 1.63
C1orf198-201ENST00000366663 HSP90AA2PQ14568 343 aaPredicted RBP25.17■■□□□ 1.62
C1orf198-201ENST00000366663 HSP90AA1P07900 732 aaKnown RBP25.17■■□□□ 1.62
C1orf198-201ENST00000366663 PNNQ9H307 717 aaKnown RBP25.17■■□□□ 1.62
C1orf198-201ENST00000366663 CANXP27824 592 aaKnown RBP25.16■■□□□ 1.62
C1orf198-201ENST00000366663 RSPH6AQ9H0K4 717 aa25.16■■□□□ 1.62
C1orf198-201ENST00000366663 SKAP1Q86WV1 359 aa25.15■■□□□ 1.62
C1orf198-201ENST00000366663 EXOC6Q8TAG9 804 aa25.14■■□□□ 1.61
C1orf198-201ENST00000366663 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
C1orf198-201ENST00000366663 NFKBIBQ15653 356 aa25.13■■□□□ 1.61
C1orf198-201ENST00000366663 AMER1Q5JTC6 1135 aaPredicted RBP25.12■■□□□ 1.61
C1orf198-201ENST00000366663 PLIN1O60240 522 aa25.1■■□□□ 1.61
C1orf198-201ENST00000366663 USP35Q9P2H5 1018 aa25.09■■□□□ 1.61
C1orf198-201ENST00000366663 FOXD1Q16676 465 aa25.09■■□□□ 1.61
C1orf198-201ENST00000366663 TRIM44Q96DX7 344 aaPredicted RBP25.09■■□□□ 1.61
C1orf198-201ENST00000366663 ZBTB7CA1YPR0 619 aa25.06■■□□□ 1.6
C1orf198-201ENST00000366663 TCERG1O14776 1098 aaKnown RBP25.04■■□□□ 1.6
C1orf198-201ENST00000366663 SLC4A1APQ9BWU0 796 aaKnown RBP25.03■■□□□ 1.6
C1orf198-201ENST00000366663 NUDCQ9Y266 331 aa25.03■■□□□ 1.6
C1orf198-201ENST00000366663 KDM2AQ9Y2K7 1162 aa25.03■■□□□ 1.6
C1orf198-201ENST00000366663 FRAT2O75474 233 aaPredicted RBP25.02■■□□□ 1.6
C1orf198-201ENST00000366663 PODXL2Q9NZ53 605 aa25.02■■□□□ 1.6
C1orf198-201ENST00000366663 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
C1orf198-201ENST00000366663 AKNAQ7Z591 1439 aa24.99■■□□□ 1.59
C1orf198-201ENST00000366663 SETD5Q9C0A6 1442 aa24.98■■□□□ 1.59
C1orf198-201ENST00000366663 PRKRIP1Q9H875 184 aaPredicted RBP24.97■■□□□ 1.59
C1orf198-201ENST00000366663 ZMYND15Q9H091 742 aa24.96■■□□□ 1.59
C1orf198-201ENST00000366663 UPF2Q9HAU5 1272 aaKnown RBP24.96■■□□□ 1.59
C1orf198-201ENST00000366663 KIF27Q86VH2 1401 aa24.95■■□□□ 1.58
C1orf198-201ENST00000366663 RCAN3Q9UKA8 241 aa24.94■■□□□ 1.58
C1orf198-201ENST00000366663 ANP32BQ92688 251 aaKnown RBP24.92■■□□□ 1.58
C1orf198-201ENST00000366663 ZBED9Q6R2W3 1325 aa24.9■■□□□ 1.58
C1orf198-201ENST00000366663 CUX2O14529 1486 aa24.89■■□□□ 1.57
C1orf198-201ENST00000366663 BECN1Q14457 450 aa24.88■■□□□ 1.57
C1orf198-201ENST00000366663 CUX1P39880 1505 aa24.86■■□□□ 1.57
C1orf198-201ENST00000366663 DNAJC5BQ9UF47 199 aa24.86■■□□□ 1.57
C1orf198-201ENST00000366663 CADPSQ9ULU8 1353 aa24.84■■□□□ 1.57
C1orf198-201ENST00000366663 TOP2BQ02880 1626 aa24.83■■□□□ 1.57
C1orf198-201ENST00000366663 WASHC2AQ641Q2 1341 aa24.82■■□□□ 1.56
C1orf198-201ENST00000366663 L1TD1Q5T7N2 865 aaKnown RBP24.81■■□□□ 1.56
C1orf198-201ENST00000366663 CFTRP13569 1480 aa24.8■■□□□ 1.56
C1orf198-201ENST00000366663 WDR97A6NE52 1622 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms