RNA–Protein interactions for RNA: ENST00000365545.1

RN7SKP269-201, Transcript of RNA, 7SK small nuclear pseudogene 269, humanhuman

BASIC

Gene RN7SKP269, Length 319 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP269-201ENST00000365545 CERKQ8TCT0 537 aa12.31□□□□□ -0.44
RN7SKP269-201ENST00000365545 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
RN7SKP269-201ENST00000365545 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
RN7SKP269-201ENST00000365545 SHROOM2Q13796 1616 aa12.28□□□□□ -0.44
RN7SKP269-201ENST00000365545 COL17A1Q9UMD9 1497 aaPredicted RBP12.27□□□□□ -0.45
RN7SKP269-201ENST00000365545 PPRC1Q5VV67 1664 aaKnown RBP12.26□□□□□ -0.45
RN7SKP269-201ENST00000365545 PBRM1Q86U86 1689 aa12.25□□□□□ -0.45
RN7SKP269-201ENST00000365545 FOXD1Q16676 465 aa12.23□□□□□ -0.45
RN7SKP269-201ENST00000365545 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.45
RN7SKP269-201ENST00000365545 ADCY10Q96PN6 1610 aa12.21□□□□□ -0.46
RN7SKP269-201ENST00000365545 NUP160Q12769 1436 aa12.19□□□□□ -0.46
RN7SKP269-201ENST00000365545 GRIN2AQ12879 1464 aa12.18□□□□□ -0.46
RN7SKP269-201ENST00000365545 FGD5Q6ZNL6 1462 aa12.16□□□□□ -0.46
RN7SKP269-201ENST00000365545 PRG4Q92954 1404 aaPredicted RBP12.16□□□□□ -0.46
RN7SKP269-201ENST00000365545 PCF11O94913 1555 aaKnown RBP12.15□□□□□ -0.46
RN7SKP269-201ENST00000365545 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
RN7SKP269-201ENST00000365545 PTPRMP28827 1452 aa12.11□□□□□ -0.47
RN7SKP269-201ENST00000365545 GLI2P10070 1586 aa12.09□□□□□ -0.47
RN7SKP269-201ENST00000365545 KIF21BO75037 1637 aa12.07□□□□□ -0.48
RN7SKP269-201ENST00000365545 HSPA2P54652 639 aa12.06□□□□□ -0.48
RN7SKP269-201ENST00000365545 JPH4Q96JJ6 628 aa12.06□□□□□ -0.48
RN7SKP269-201ENST00000365545 ABCA5Q8WWZ7 1642 aa12.05□□□□□ -0.48
RN7SKP269-201ENST00000365545 ADAMTS12P58397 1594 aa12.04□□□□□ -0.48
RN7SKP269-201ENST00000365545 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
RN7SKP269-201ENST00000365545 MAP3K4Q9Y6R4 1608 aa12□□□□□ -0.49
RN7SKP269-201ENST00000365545 CUX1P39880 1505 aa11.99□□□□□ -0.49
RN7SKP269-201ENST00000365545 TEX14Q8IWB6 1497 aa11.98□□□□□ -0.49
RN7SKP269-201ENST00000365545 ASXL2Q76L83 1435 aa11.98□□□□□ -0.49
RN7SKP269-201ENST00000365545 PLB1Q6P1J6 1458 aa11.95□□□□□ -0.5
RN7SKP269-201ENST00000365545 ABCA10Q8WWZ4 1543 aa11.95□□□□□ -0.5
RN7SKP269-201ENST00000365545 FHAD1B1AJZ9 1412 aa11.93□□□□□ -0.5
RN7SKP269-201ENST00000365545 MADDQ8WXG6 1647 aa11.92□□□□□ -0.5
RN7SKP269-201ENST00000365545 EPRSP07814 1512 aaKnown RBP11.91□□□□□ -0.5
RN7SKP269-201ENST00000365545 CUL7Q14999 1698 aa11.9□□□□□ -0.5
RN7SKP269-201ENST00000365545 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
RN7SKP269-201ENST00000365545 ABCC2Q92887 1545 aa11.9□□□□□ -0.5
RN7SKP269-201ENST00000365545 BCORL1Q5H9F3 1711 aa11.89□□□□□ -0.51
RN7SKP269-201ENST00000365545 MED1Q15648 1581 aaPredicted RBP11.88□□□□□ -0.51
RN7SKP269-201ENST00000365545 KIAA0586Q9BVV6 1533 aa11.87□□□□□ -0.51
RN7SKP269-201ENST00000365545 RIMS1Q86UR5 1692 aaKnown RBP11.85□□□□□ -0.51
RN7SKP269-201ENST00000365545 STRCQ7RTU9 1775 aa11.82□□□□□ -0.52
RN7SKP269-201ENST00000365545 PLPPR3Q6T4P5 718 aa11.81□□□□□ -0.52
RN7SKP269-201ENST00000365545 PTPRGP23470 1445 aa11.8□□□□□ -0.52
RN7SKP269-201ENST00000365545 TTBK1Q5TCY1 1321 aaPredicted RBP11.8□□□□□ -0.52
RN7SKP269-201ENST00000365545 LTBP4Q8N2S1 1624 aa11.79□□□□□ -0.52
RN7SKP269-201ENST00000365545 IQSEC2Q5JU85 1478 aa11.79□□□□□ -0.52
RN7SKP269-201ENST00000365545 YEATS2Q9ULM3 1422 aa11.77□□□□□ -0.52
RN7SKP269-201ENST00000365545 DMRT2Q9Y5R5 561 aa11.77□□□□□ -0.53
RN7SKP269-201ENST00000365545 MAGI3Q5TCQ9 1506 aa11.76□□□□□ -0.53
RN7SKP269-201ENST00000365545 ERICH3Q5RHP9 1530 aa11.76□□□□□ -0.53
RN7SKP269-201ENST00000365545 ARID4BQ4LE39 1312 aaPredicted RBP11.74□□□□□ -0.53
RN7SKP269-201ENST00000365545 UHRF1BP1LA0JNW5 1464 aa11.74□□□□□ -0.53
RN7SKP269-201ENST00000365545 CD109Q6YHK3 1445 aa11.72□□□□□ -0.53
RN7SKP269-201ENST00000365545 ZCCHC11Q5TAX3 1644 aaKnown RBP11.71□□□□□ -0.53
RN7SKP269-201ENST00000365545 KDM5BQ9UGL1 1544 aa11.71□□□□□ -0.53
RN7SKP269-201ENST00000365545 UBAP1LF5GYI3 381 aa11.71□□□□□ -0.53
RN7SKP269-201ENST00000365545 CFAP43Q8NDM7 1665 aa11.71□□□□□ -0.54
RN7SKP269-201ENST00000365545 ARAP3Q8WWN8 1544 aa11.7□□□□□ -0.54
RN7SKP269-201ENST00000365545 PTPRTO14522 1441 aa11.69□□□□□ -0.54
RN7SKP269-201ENST00000365545 TNIKQ9UKE5 1360 aa11.68□□□□□ -0.54
RN7SKP269-201ENST00000365545 HSPA1LP34931 641 aa11.68□□□□□ -0.54
RN7SKP269-201ENST00000365545 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
RN7SKP269-201ENST00000365545 UACAQ9BZF9 1416 aa11.68□□□□□ -0.54
RN7SKP269-201ENST00000365545 WDR7Q9Y4E6 1490 aa11.66□□□□□ -0.54
RN7SKP269-201ENST00000365545 WRNQ14191 1432 aaPredicted RBP eCLIP11.64□□□□□ -0.55
RN7SKP269-201ENST00000365545 RAPGEF3O95398 923 aa11.63□□□□□ -0.55
RN7SKP269-201ENST00000365545 TTC37Q6PGP7 1564 aa11.6□□□□□ -0.55
RN7SKP269-201ENST00000365545 KCNH8Q96L42 1107 aa11.6□□□□□ -0.55
RN7SKP269-201ENST00000365545 RGS17Q9UGC6 210 aaPredicted RBP11.6□□□□□ -0.55
RN7SKP269-201ENST00000365545 FRMPD1Q5SYB0 1578 aa11.59□□□□□ -0.55
RN7SKP269-201ENST00000365545 SIGLEC1Q9BZZ2 1709 aa11.58□□□□□ -0.56
RN7SKP269-201ENST00000365545 FER1L4A9Z1Z3 1794 aa11.58□□□□□ -0.56
RN7SKP269-201ENST00000365545 CARMIL2Q6F5E8 1435 aa11.58□□□□□ -0.56
RN7SKP269-201ENST00000365545 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
RN7SKP269-201ENST00000365545 ARHGEF40Q8TER5 1519 aa11.55□□□□□ -0.56
RN7SKP269-201ENST00000365545 CEBPAP49715 358 aaPredicted RBP11.54□□□□□ -0.56
RN7SKP269-201ENST00000365545 PIP4K2BP78356 416 aa11.54□□□□□ -0.56
RN7SKP269-201ENST00000365545 ZNF335Q9H4Z2 1342 aaPredicted RBP11.53□□□□□ -0.56
RN7SKP269-201ENST00000365545 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.56
RN7SKP269-201ENST00000365545 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.56
RN7SKP269-201ENST00000365545 MLECQ14165 292 aa11.52□□□□□ -0.57
RN7SKP269-201ENST00000365545 SETD1AO15047 1707 aaKnown RBP11.51□□□□□ -0.57
RN7SKP269-201ENST00000365545 FANCAO15360 1455 aa11.51□□□□□ -0.57
RN7SKP269-201ENST00000365545 PPP6R1Q9UPN7 881 aa11.5□□□□□ -0.57
RN7SKP269-201ENST00000365545 PHLDB1Q86UU1 1377 aa11.5□□□□□ -0.57
RN7SKP269-201ENST00000365545 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
RN7SKP269-201ENST00000365545 DISP1Q96F81 1524 aa11.49□□□□□ -0.57
RN7SKP269-201ENST00000365545 POTEAQ6S8J7 498 aa11.47□□□□□ -0.57
RN7SKP269-201ENST00000365545 NCOA1Q15788 1441 aa11.46□□□□□ -0.57
RN7SKP269-201ENST00000365545 SETD1BQ9UPS6 1966 aaKnown RBP11.46□□□□□ -0.58
RN7SKP269-201ENST00000365545 ADRA2BP18089 450 aa11.45□□□□□ -0.58
RN7SKP269-201ENST00000365545 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
RN7SKP269-201ENST00000365545 NEO1Q92859 1461 aa11.44□□□□□ -0.58
RN7SKP269-201ENST00000365545 RICTORQ6R327 1708 aa11.43□□□□□ -0.58
RN7SKP269-201ENST00000365545 AKNAQ7Z591 1439 aa11.43□□□□□ -0.58
RN7SKP269-201ENST00000365545 TOM1O60784 492 aa11.42□□□□□ -0.58
RN7SKP269-201ENST00000365545 SRCAPQ6ZRS2 3230 aa11.42□□□□□ -0.58
RN7SKP269-201ENST00000365545 IQGAP2Q13576 1575 aa11.41□□□□□ -0.58
RN7SKP269-201ENST00000365545 PIAS4Q8N2W9 510 aaPredicted RBP11.41□□□□□ -0.58
RN7SKP269-201ENST00000365545 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms