RNA–Protein interactions for RNA: ENST00000362839.1

RNU4-23P-201, Transcript of RNA, U4 small nuclear 23, pseudogene, humanhuman

BASIC

Gene RNU4-23P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-23P-201ENST00000362839 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
RNU4-23P-201ENST00000362839 RNF25Q96BH1 459 aaPredicted RBP14.18□□□□□ -0.14
RNU4-23P-201ENST00000362839 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
RNU4-23P-201ENST00000362839 HS6ST3Q8IZP7 471 aa14.13□□□□□ -0.15
RNU4-23P-201ENST00000362839 PITPNM1O00562 1244 aa14.12□□□□□ -0.15
RNU4-23P-201ENST00000362839 FAM212AQ96EL1 285 aa14.12□□□□□ -0.15
RNU4-23P-201ENST00000362839 RASEFQ8IZ41 740 aa14.08□□□□□ -0.16
RNU4-23P-201ENST00000362839 RIOK3O14730 519 aaKnown RBP14.07□□□□□ -0.16
RNU4-23P-201ENST00000362839 BCANQ96GW7 911 aa14.07□□□□□ -0.16
RNU4-23P-201ENST00000362839 TSHZ2Q9NRE2 1034 aa14.07□□□□□ -0.16
RNU4-23P-201ENST00000362839 DNAJC5Q9H3Z4 198 aa14.05□□□□□ -0.16
RNU4-23P-201ENST00000362839 CHRM1P11229 460 aaPredicted RBP14.03□□□□□ -0.16
RNU4-23P-201ENST00000362839 TAOK2Q9UL54 1235 aa14.02□□□□□ -0.17
RNU4-23P-201ENST00000362839 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.17
RNU4-23P-201ENST00000362839 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.17
RNU4-23P-201ENST00000362839 STK25O00506 426 aa13.93□□□□□ -0.18
RNU4-23P-201ENST00000362839 PYGBP11216 843 aa13.93□□□□□ -0.18
RNU4-23P-201ENST00000362839 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
RNU4-23P-201ENST00000362839 SGIP1Q9BQI5 828 aa13.9□□□□□ -0.18
RNU4-23P-201ENST00000362839 GTPBP6O43824 516 aaPredicted RBP13.88□□□□□ -0.19
RNU4-23P-201ENST00000362839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
RNU4-23P-201ENST00000362839 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
RNU4-23P-201ENST00000362839 BCL11BQ9C0K0 894 aaPredicted RBP13.84□□□□□ -0.19
RNU4-23P-201ENST00000362839 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
RNU4-23P-201ENST00000362839 STK24Q9Y6E0 443 aa13.83□□□□□ -0.2
RNU4-23P-201ENST00000362839 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
RNU4-23P-201ENST00000362839 PRKCSHP14314 528 aaPredicted RBP13.78□□□□□ -0.2
RNU4-23P-201ENST00000362839 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
RNU4-23P-201ENST00000362839 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
RNU4-23P-201ENST00000362839 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
RNU4-23P-201ENST00000362839 RYDENQ9NUL5 291 aaKnown RBP13.7□□□□□ -0.22
RNU4-23P-201ENST00000362839 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
RNU4-23P-201ENST00000362839 PCDHB8Q9UN66 801 aa13.68□□□□□ -0.22
RNU4-23P-201ENST00000362839 PCDHB13Q9Y5F0 798 aa13.68□□□□□ -0.22
RNU4-23P-201ENST00000362839 PDAP1Q13442 181 aaKnown RBP13.66□□□□□ -0.22
RNU4-23P-201ENST00000362839 TPRNQ4KMQ1 711 aa13.64□□□□□ -0.23
RNU4-23P-201ENST00000362839 NBR1Q14596 966 aa13.61□□□□□ -0.23
RNU4-23P-201ENST00000362839 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
RNU4-23P-201ENST00000362839 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
RNU4-23P-201ENST00000362839 PIP4P2Q8N4L2 257 aa13.59□□□□□ -0.23
RNU4-23P-201ENST00000362839 PSEN1P49768 467 aa13.58□□□□□ -0.24
RNU4-23P-201ENST00000362839 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
RNU4-23P-201ENST00000362839 IFNL1Q8IU54 200 aa13.54□□□□□ -0.24
RNU4-23P-201ENST00000362839 MAP3K13O43283 966 aa13.52□□□□□ -0.25
RNU4-23P-201ENST00000362839 KIF12Q96FN5 646 aa13.52□□□□□ -0.25
RNU4-23P-201ENST00000362839 MFRPQ9BY79 579 aa13.51□□□□□ -0.25
RNU4-23P-201ENST00000362839 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
RNU4-23P-201ENST00000362839 EFCAB3Q8N7B9 438 aa13.42□□□□□ -0.26
RNU4-23P-201ENST00000362839 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
RNU4-23P-201ENST00000362839 CABP2Q9NPB3 220 aa13.41□□□□□ -0.26
RNU4-23P-201ENST00000362839 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
RNU4-23P-201ENST00000362839 FBXO22Q8NEZ5 403 aa13.39□□□□□ -0.27
RNU4-23P-201ENST00000362839 SOX12O15370 315 aa13.38□□□□□ -0.27
RNU4-23P-201ENST00000362839 PPP1R37O75864 691 aa13.38□□□□□ -0.27
RNU4-23P-201ENST00000362839 NLRP6P59044 892 aa13.37□□□□□ -0.27
RNU4-23P-201ENST00000362839 P3H3Q8IVL6 736 aa13.37□□□□□ -0.27
RNU4-23P-201ENST00000362839 PHF12Q96QT6 1004 aa13.37□□□□□ -0.27
RNU4-23P-201ENST00000362839 WDR70Q9NW82 654 aa13.37□□□□□ -0.27
RNU4-23P-201ENST00000362839 PHF8Q9UPP1 1060 aa13.36□□□□□ -0.27
RNU4-23P-201ENST00000362839 KCNV2Q8TDN2 545 aa13.32□□□□□ -0.28
RNU4-23P-201ENST00000362839 MS4A4AQ96JQ5 239 aa13.24□□□□□ -0.29
RNU4-23P-201ENST00000362839 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
RNU4-23P-201ENST00000362839 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
RNU4-23P-201ENST00000362839 C19orf67A6NJJ6 358 aa13.23□□□□□ -0.29
RNU4-23P-201ENST00000362839 MS4A3Q96HJ5 214 aa13.23□□□□□ -0.29
RNU4-23P-201ENST00000362839 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
RNU4-23P-201ENST00000362839 E2F4Q16254 413 aa13.17□□□□□ -0.3
RNU4-23P-201ENST00000362839 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
RNU4-23P-201ENST00000362839 NCKAP5LQ9HCH0 1330 aa13.16□□□□□ -0.3
RNU4-23P-201ENST00000362839 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
RNU4-23P-201ENST00000362839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
RNU4-23P-201ENST00000362839 PDE4AP27815 886 aa13.12□□□□□ -0.31
RNU4-23P-201ENST00000362839 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
RNU4-23P-201ENST00000362839 TIE1P35590 1138 aa13.11□□□□□ -0.31
RNU4-23P-201ENST00000362839 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
RNU4-23P-201ENST00000362839 LMOD2Q6P5Q4 547 aa13.1□□□□□ -0.31
RNU4-23P-201ENST00000362839 MFSD10Q14728 455 aa13.09□□□□□ -0.31
RNU4-23P-201ENST00000362839 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
RNU4-23P-201ENST00000362839 ILDR1Q86SU0 546 aaPredicted RBP13.07□□□□□ -0.32
RNU4-23P-201ENST00000362839 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
RNU4-23P-201ENST00000362839 DDX27Q96GQ7 796 aaKnown RBP13.04□□□□□ -0.32
RNU4-23P-201ENST00000362839 SEMA3EO15041 775 aa13.03□□□□□ -0.32
RNU4-23P-201ENST00000362839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.32
RNU4-23P-201ENST00000362839 TULP1O00294 542 aaPredicted RBP13.02□□□□□ -0.33
RNU4-23P-201ENST00000362839 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
RNU4-23P-201ENST00000362839 TESPA1A2RU30 521 aaPredicted RBP13.01□□□□□ -0.33
RNU4-23P-201ENST00000362839 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
RNU4-23P-201ENST00000362839 CAMK2BQ13554 666 aa12.98□□□□□ -0.33
RNU4-23P-201ENST00000362839 ARIH1Q9Y4X5 557 aaPredicted RBP12.98□□□□□ -0.33
RNU4-23P-201ENST00000362839 HAX1O00165 279 aa12.95□□□□□ -0.34
RNU4-23P-201ENST00000362839 EVX2Q03828 476 aa12.95□□□□□ -0.34
RNU4-23P-201ENST00000362839 DPY19L2Q6NUT2 758 aa12.95□□□□□ -0.34
RNU4-23P-201ENST00000362839 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
RNU4-23P-201ENST00000362839 CLCN6P51797 869 aa12.92□□□□□ -0.34
RNU4-23P-201ENST00000362839 ZC3H15Q8WU90 426 aaKnown RBP12.92□□□□□ -0.34
RNU4-23P-201ENST00000362839 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.34
RNU4-23P-201ENST00000362839 PPP1R15BQ5SWA1 713 aa12.9□□□□□ -0.34
RNU4-23P-201ENST00000362839 PDCD7Q8N8D1 485 aaKnown RBP12.89□□□□□ -0.35
RNU4-23P-201ENST00000362839 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
RNU4-23P-201ENST00000362839 SMYD5Q6GMV2 418 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms