RNA–Protein interactions for RNA: ENST00000362839.1

RNU4-23P-201, Transcript of RNA, U4 small nuclear 23, pseudogene, humanhuman

BASIC

Gene RNU4-23P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-23P-201ENST00000362839 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
RNU4-23P-201ENST00000362839 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
RNU4-23P-201ENST00000362839 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
RNU4-23P-201ENST00000362839 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
RNU4-23P-201ENST00000362839 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
RNU4-23P-201ENST00000362839 FOXD1Q16676 465 aa20.13■□□□□ 0.81
RNU4-23P-201ENST00000362839 PPP6R1Q9UPN7 881 aa19.91■□□□□ 0.78
RNU4-23P-201ENST00000362839 ADRA2BP18089 450 aa19.9■□□□□ 0.78
RNU4-23P-201ENST00000362839 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
RNU4-23P-201ENST00000362839 KCNA4P22459 653 aa19.09■□□□□ 0.65
RNU4-23P-201ENST00000362839 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
RNU4-23P-201ENST00000362839 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
RNU4-23P-201ENST00000362839 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
RNU4-23P-201ENST00000362839 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
RNU4-23P-201ENST00000362839 MSH5O43196 834 aa18.26■□□□□ 0.51
RNU4-23P-201ENST00000362839 NPM3O75607 178 aaKnown RBP18.22■□□□□ 0.51
RNU4-23P-201ENST00000362839 SCAF1Q9H7N4 1312 aaKnown RBP18.15■□□□□ 0.5
RNU4-23P-201ENST00000362839 CNKSR2Q8WXI2 1034 aa18.11■□□□□ 0.49
RNU4-23P-201ENST00000362839 CSRNP3Q8WYN3 585 aa18.02■□□□□ 0.48
RNU4-23P-201ENST00000362839 MAPK8IP2Q13387 824 aaPredicted RBP17.89■□□□□ 0.45
RNU4-23P-201ENST00000362839 ZBTB22O15209 634 aa17.6■□□□□ 0.41
RNU4-23P-201ENST00000362839 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
RNU4-23P-201ENST00000362839 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
RNU4-23P-201ENST00000362839 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
RNU4-23P-201ENST00000362839 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
RNU4-23P-201ENST00000362839 FOXD4L1Q9NU39 408 aa17.35■□□□□ 0.37
RNU4-23P-201ENST00000362839 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
RNU4-23P-201ENST00000362839 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
RNU4-23P-201ENST00000362839 ATXN8OSP0DMR3 200 aa16.69■□□□□ 0.26
RNU4-23P-201ENST00000362839 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
RNU4-23P-201ENST00000362839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.24
RNU4-23P-201ENST00000362839 U3KPZ7 1027 aaPredicted RBP16.36■□□□□ 0.21
RNU4-23P-201ENST00000362839 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
RNU4-23P-201ENST00000362839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
RNU4-23P-201ENST00000362839 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
RNU4-23P-201ENST00000362839 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
RNU4-23P-201ENST00000362839 FKBP8Q14318 412 aa16.22■□□□□ 0.19
RNU4-23P-201ENST00000362839 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
RNU4-23P-201ENST00000362839 APLP2Q06481 763 aa15.97■□□□□ 0.15
RNU4-23P-201ENST00000362839 RTN4Q9NQC3 1192 aaKnown RBP15.91■□□□□ 0.14
RNU4-23P-201ENST00000362839 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
RNU4-23P-201ENST00000362839 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
RNU4-23P-201ENST00000362839 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
RNU4-23P-201ENST00000362839 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
RNU4-23P-201ENST00000362839 MKRN4PQ13434 485 aaPredicted RBP15.66■□□□□ 0.1
RNU4-23P-201ENST00000362839 SPDYE4A6NLX3 237 aa15.59■□□□□ 0.09
RNU4-23P-201ENST00000362839 CAPN15O75808 1086 aa15.59■□□□□ 0.09
RNU4-23P-201ENST00000362839 POLA2Q14181 598 aa15.59■□□□□ 0.09
RNU4-23P-201ENST00000362839 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
RNU4-23P-201ENST00000362839 POTEDQ86YR6 584 aa15.55■□□□□ 0.08
RNU4-23P-201ENST00000362839 FBLN2P98095 1184 aa15.54■□□□□ 0.08
RNU4-23P-201ENST00000362839 PROM2Q8N271 834 aa15.44■□□□□ 0.06
RNU4-23P-201ENST00000362839 FBXO3Q9UK99 471 aa15.43■□□□□ 0.06
RNU4-23P-201ENST00000362839 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
RNU4-23P-201ENST00000362839 ABCB7O75027 752 aa15.38■□□□□ 0.05
RNU4-23P-201ENST00000362839 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
RNU4-23P-201ENST00000362839 VASPP50552 380 aaPredicted RBP15.23■□□□□ 0.03
RNU4-23P-201ENST00000362839 DSG3P32926 999 aa15.21■□□□□ 0.03
RNU4-23P-201ENST00000362839 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
RNU4-23P-201ENST00000362839 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
RNU4-23P-201ENST00000362839 OSCARQ8IYS5 282 aa15.03■□□□□ -0
RNU4-23P-201ENST00000362839 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
RNU4-23P-201ENST00000362839 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
RNU4-23P-201ENST00000362839 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
RNU4-23P-201ENST00000362839 SSUH2Q9Y2M2 353 aa14.96□□□□□ -0.01
RNU4-23P-201ENST00000362839 PABPN1Q86U42 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
RNU4-23P-201ENST00000362839 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
RNU4-23P-201ENST00000362839 PKD2Q13563 968 aa14.85□□□□□ -0.03
RNU4-23P-201ENST00000362839 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
RNU4-23P-201ENST00000362839 KLHL34Q8N239 644 aa14.81□□□□□ -0.04
RNU4-23P-201ENST00000362839 SPOCK2Q92563 424 aa14.78□□□□□ -0.04
RNU4-23P-201ENST00000362839 PLCD3Q8N3E9 789 aa14.74□□□□□ -0.05
RNU4-23P-201ENST00000362839 DCAF8L2P0C7V8 631 aa14.72□□□□□ -0.05
RNU4-23P-201ENST00000362839 MIER1Q8N108 512 aa14.71□□□□□ -0.05
RNU4-23P-201ENST00000362839 PLCB2Q00722 1185 aa14.68□□□□□ -0.06
RNU4-23P-201ENST00000362839 ECM2O94769 699 aaPredicted RBP14.6□□□□□ -0.07
RNU4-23P-201ENST00000362839 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
RNU4-23P-201ENST00000362839 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
RNU4-23P-201ENST00000362839 RGL2O15211 777 aa14.47□□□□□ -0.09
RNU4-23P-201ENST00000362839 HAP1P54257 671 aaPredicted RBP14.46□□□□□ -0.09
RNU4-23P-201ENST00000362839 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
RNU4-23P-201ENST00000362839 CIZ1Q9ULV3 898 aaPredicted RBP14.44□□□□□ -0.1
RNU4-23P-201ENST00000362839 RBM42Q9BTD8 480 aaKnown RBP14.42□□□□□ -0.1
RNU4-23P-201ENST00000362839 BBXQ8WY36 941 aaPredicted RBP14.41□□□□□ -0.1
RNU4-23P-201ENST00000362839 AKT1S1Q96B36 256 aa14.4□□□□□ -0.1
RNU4-23P-201ENST00000362839 SPDYE1Q8NFV5 336 aaPredicted RBP14.38□□□□□ -0.11
RNU4-23P-201ENST00000362839 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.36□□□□□ -0.11
RNU4-23P-201ENST00000362839 TRIM41Q8WV44 630 aa14.3□□□□□ -0.12
RNU4-23P-201ENST00000362839 CLEC11AQ9Y240 323 aa14.3□□□□□ -0.12
RNU4-23P-201ENST00000362839 NUBP1P53384 320 aa14.29□□□□□ -0.12
RNU4-23P-201ENST00000362839 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
RNU4-23P-201ENST00000362839 PAXIP1Q6ZW49 1069 aaPredicted RBP14.28□□□□□ -0.12
RNU4-23P-201ENST00000362839 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
RNU4-23P-201ENST00000362839 GSE1Q14687 1217 aa14.26□□□□□ -0.13
RNU4-23P-201ENST00000362839 VSIG10Q8N0Z9 540 aa14.26□□□□□ -0.13
RNU4-23P-201ENST00000362839 CREBZFQ9NS37 354 aa14.26□□□□□ -0.13
RNU4-23P-201ENST00000362839 CHGAP10645 457 aaKnown RBP14.24□□□□□ -0.13
RNU4-23P-201ENST00000362839 CFAP44Q96MT7 982 aa14.24□□□□□ -0.13
RNU4-23P-201ENST00000362839 MNX1P50219 401 aaPredicted RBP14.21□□□□□ -0.13
RNU4-23P-201ENST00000362839 DCAF8Q5TAQ9 597 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms