RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TMC1Q8TDI8 760 aa6.55□□□□□ -1.36
SCN3A-202ENST00000360093 GTF3C3Q9Y5Q9 886 aa6.55□□□□□ -1.36
SCN3A-202ENST00000360093 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.55□□□□□ -1.36
SCN3A-202ENST00000360093 KCNH8Q96L42 1107 aa6.54□□□□□ -1.36
SCN3A-202ENST00000360093 WIZO95785 1651 aa6.54□□□□□ -1.36
SCN3A-202ENST00000360093 SMARCA4P51532 1647 aa6.54□□□□□ -1.36
SCN3A-202ENST00000360093 WDR43Q15061 677 aaKnown RBP eCLIP6.54□□□□□ -1.36
SCN3A-202ENST00000360093 CARMIL2Q6F5E8 1435 aa6.54□□□□□ -1.36
SCN3A-202ENST00000360093 ABCC8Q09428 1581 aa6.53□□□□□ -1.36
SCN3A-202ENST00000360093 DDX10Q13206 875 aaKnown RBP6.53□□□□□ -1.36
SCN3A-202ENST00000360093 EIF4G1Q04637 1599 aaKnown RBP6.52□□□□□ -1.37
SCN3A-202ENST00000360093 RRP7BPQ9NSQ0 103 aa6.52□□□□□ -1.37
SCN3A-202ENST00000360093 CCNB3Q8WWL7 1395 aa6.52□□□□□ -1.37
SCN3A-202ENST00000360093 ANP32AP39687 249 aaKnown RBP6.52□□□□□ -1.37
SCN3A-202ENST00000360093 KDM2AQ9Y2K7 1162 aa6.52□□□□□ -1.37
SCN3A-202ENST00000360093 SOGA1O94964 1423 aa6.51□□□□□ -1.37
SCN3A-202ENST00000360093 HNRNPUQ00839 825 aaKnown RBP eCLIP6.51□□□□□ -1.37
SCN3A-202ENST00000360093 PPP1R15AO75807 674 aaPredicted RBP6.51□□□□□ -1.37
SCN3A-202ENST00000360093 FMN1Q68DA7 1419 aa6.51□□□□□ -1.37
SCN3A-202ENST00000360093 UPF2Q9HAU5 1272 aaKnown RBP6.51□□□□□ -1.37
SCN3A-202ENST00000360093 TIMELESSQ9UNS1 1208 aa6.5□□□□□ -1.37
SCN3A-202ENST00000360093 CADPSQ9ULU8 1353 aa6.5□□□□□ -1.37
SCN3A-202ENST00000360093 KANK1Q14678 1352 aa6.5□□□□□ -1.37
SCN3A-202ENST00000360093 FAM9BQ8IZU0 186 aa6.49□□□□□ -1.37
SCN3A-202ENST00000360093 VPS8Q8N3P4 1428 aa6.49□□□□□ -1.37
SCN3A-202ENST00000360093 ARHGAP35Q9NRY4 1499 aa6.49□□□□□ -1.37
SCN3A-202ENST00000360093 ATAD2BQ9ULI0 1458 aa6.48□□□□□ -1.37
SCN3A-202ENST00000360093 PLPPR3Q6T4P5 718 aa6.48□□□□□ -1.37
SCN3A-202ENST00000360093 HDGFP51858 240 aaKnown RBP6.48□□□□□ -1.37
SCN3A-202ENST00000360093 MRS2Q9HD23 443 aa6.48□□□□□ -1.37
SCN3A-202ENST00000360093 ARID4BQ4LE39 1312 aaPredicted RBP6.47□□□□□ -1.37
SCN3A-202ENST00000360093 CFAP53Q96M91 514 aa6.47□□□□□ -1.37
SCN3A-202ENST00000360093 KNSTRNQ9Y448 316 aa6.45□□□□□ -1.38
SCN3A-202ENST00000360093 RAPGEF2Q9Y4G8 1499 aa6.45□□□□□ -1.38
SCN3A-202ENST00000360093 FKBP8Q14318 412 aa6.44□□□□□ -1.38
SCN3A-202ENST00000360093 CARD11Q9BXL7 1154 aa6.44□□□□□ -1.38
SCN3A-202ENST00000360093 MYH16Q9H6N6 1097 aa6.44□□□□□ -1.38
SCN3A-202ENST00000360093 EIF5BO60841 1220 aaKnown RBP6.44□□□□□ -1.38
SCN3A-202ENST00000360093 RSPH4AQ5TD94 716 aa6.44□□□□□ -1.38
SCN3A-202ENST00000360093 HSP90AA1P07900 732 aaKnown RBP6.43□□□□□ -1.38
SCN3A-202ENST00000360093 RGL3Q3MIN7 710 aa6.43□□□□□ -1.38
SCN3A-202ENST00000360093 NPM2Q86SE8 214 aaKnown RBP6.43□□□□□ -1.38
SCN3A-202ENST00000360093 PNNQ9H307 717 aaKnown RBP6.43□□□□□ -1.38
SCN3A-202ENST00000360093 SETD5Q9C0A6 1442 aa6.43□□□□□ -1.38
SCN3A-202ENST00000360093 C14orf37Q86TY3 774 aa6.43□□□□□ -1.38
SCN3A-202ENST00000360093 CCDC136Q96JN2 1154 aa6.43□□□□□ -1.38
SCN3A-202ENST00000360093 CCDC18Q5T9S5 1454 aa6.42□□□□□ -1.38
SCN3A-202ENST00000360093 ANP32BQ92688 251 aaKnown RBP6.42□□□□□ -1.38
SCN3A-202ENST00000360093 BCL11AQ9H165 835 aa6.42□□□□□ -1.38
SCN3A-202ENST00000360093 FANCD2Q9BXW9 1451 aa6.42□□□□□ -1.38
SCN3A-202ENST00000360093 NUDCQ9Y266 331 aa6.41□□□□□ -1.38
SCN3A-202ENST00000360093 TDRD9Q8NDG6 1382 aaKnown RBP6.41□□□□□ -1.38
SCN3A-202ENST00000360093 EFCAB2Q5VUJ9 269 aa6.41□□□□□ -1.38
SCN3A-202ENST00000360093 POGKQ9P215 609 aa6.4□□□□□ -1.38
SCN3A-202ENST00000360093 SCAF1Q9H7N4 1312 aaKnown RBP6.4□□□□□ -1.38
SCN3A-202ENST00000360093 SALL2Q9Y467 1007 aaPredicted RBP6.4□□□□□ -1.38
SCN3A-202ENST00000360093 ANKRD30AQ9BXX3 1397 aa6.4□□□□□ -1.39
SCN3A-202ENST00000360093 TMF1P82094 1093 aa6.4□□□□□ -1.39
SCN3A-202ENST00000360093 CHMP4BQ9H444 224 aaKnown RBP6.4□□□□□ -1.39
SCN3A-202ENST00000360093 MIER1Q8N108 512 aa6.38□□□□□ -1.39
SCN3A-202ENST00000360093 MS4A1P11836 297 aa6.37□□□□□ -1.39
SCN3A-202ENST00000360093 NCAPD3P42695 1498 aa6.37□□□□□ -1.39
SCN3A-202ENST00000360093 HAP1P54257 671 aaPredicted RBP6.37□□□□□ -1.39
SCN3A-202ENST00000360093 MAPK8IP3Q9UPT6 1336 aa6.37□□□□□ -1.39
SCN3A-202ENST00000360093 DCAF11Q8TEB1 546 aa6.37□□□□□ -1.39
SCN3A-202ENST00000360093 JPH4Q96JJ6 628 aa6.35□□□□□ -1.39
SCN3A-202ENST00000360093 HIRIP3Q9BW71 556 aaPredicted RBP6.35□□□□□ -1.39
SCN3A-202ENST00000360093 EIF3AQ14152 1382 aaKnown RBP6.35□□□□□ -1.39
SCN3A-202ENST00000360093 TRHP20396 242 aaPredicted RBP6.35□□□□□ -1.39
SCN3A-202ENST00000360093 GAPVD1Q14C86 1478 aa6.34□□□□□ -1.39
SCN3A-202ENST00000360093 DDRGK1Q96HY6 314 aa6.34□□□□□ -1.39
SCN3A-202ENST00000360093 BECN1Q14457 450 aa6.34□□□□□ -1.39
SCN3A-202ENST00000360093 SIN3AQ96ST3 1273 aa6.34□□□□□ -1.39
SCN3A-202ENST00000360093 CASC1Q6TDU7 716 aa6.34□□□□□ -1.4
SCN3A-202ENST00000360093 NUP155O75694 1391 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 ZBTB7CA1YPR0 619 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 FTSJ3Q8IY81 847 aaKnown RBP6.33□□□□□ -1.4
SCN3A-202ENST00000360093 PKD2Q13563 968 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 CCER2I3L3R5 266 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 MPHOSPH9Q99550 1183 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 ANP32EQ9BTT0 268 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 FGD5Q6ZNL6 1462 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 RAB3GAP2Q9H2M9 1393 aa6.32□□□□□ -1.4
SCN3A-202ENST00000360093 PPM1GO15355 546 aaPredicted RBP6.32□□□□□ -1.4
SCN3A-202ENST00000360093 FHOD3Q2V2M9 1422 aa6.32□□□□□ -1.4
SCN3A-202ENST00000360093 GGT6Q6P531 493 aa6.32□□□□□ -1.4
SCN3A-202ENST00000360093 SPAG9O60271 1321 aaKnown RBP6.32□□□□□ -1.4
SCN3A-202ENST00000360093 KANK4Q5T7N3 995 aaPredicted RBP6.32□□□□□ -1.4
SCN3A-202ENST00000360093 CUX1P39880 1505 aa6.32□□□□□ -1.4
SCN3A-202ENST00000360093 UACAQ9BZF9 1416 aa6.31□□□□□ -1.4
SCN3A-202ENST00000360093 HMGXB3Q12766 1538 aa6.31□□□□□ -1.4
SCN3A-202ENST00000360093 CHMP4AQ9BY43 222 aa6.31□□□□□ -1.4
SCN3A-202ENST00000360093 SRPK2P78362 688 aaKnown RBP6.31□□□□□ -1.4
SCN3A-202ENST00000360093 HDGFL2Q7Z4V5 671 aaPredicted RBP6.31□□□□□ -1.4
SCN3A-202ENST00000360093 ROCK2O75116 1388 aaKnown RBP6.31□□□□□ -1.4
SCN3A-202ENST00000360093 PTPRGP23470 1445 aa6.31□□□□□ -1.4
SCN3A-202ENST00000360093 KTN1Q86UP2 1357 aaKnown RBP6.3□□□□□ -1.4
SCN3A-202ENST00000360093 CFAP44Q96MT7 982 aa6.3□□□□□ -1.4
SCN3A-202ENST00000360093 A0A0G2JS52 829 aa6.3□□□□□ -1.4
SCN3A-202ENST00000360093 CALD1Q05682 793 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms