RNA–Protein interactions for RNA: ENST00000359524.7

RUNX2-201, Transcript of runt related transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene RUNX2, Length 5,390 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-201ENST00000359524 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
RUNX2-201ENST00000359524 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
RUNX2-201ENST00000359524 SMARCA4P51532 1647 aa22.4■■□□□ 1.18
RUNX2-201ENST00000359524 NCLP19338 710 aaKnown RBP22.39■■□□□ 1.18
RUNX2-201ENST00000359524 SOGA1O94964 1423 aa22.39■■□□□ 1.18
RUNX2-201ENST00000359524 TNIKQ9UKE5 1360 aa22.39■■□□□ 1.17
RUNX2-201ENST00000359524 CHGAP10645 457 aaKnown RBP22.38■■□□□ 1.17
RUNX2-201ENST00000359524 GOLGA6L22H0YM25 854 aa22.37■■□□□ 1.17
RUNX2-201ENST00000359524 FAM9BQ8IZU0 186 aa22.36■■□□□ 1.17
RUNX2-201ENST00000359524 ARID3CA6NKF2 412 aa22.35■■□□□ 1.17
RUNX2-201ENST00000359524 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.17
RUNX2-201ENST00000359524 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
RUNX2-201ENST00000359524 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
RUNX2-201ENST00000359524 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
RUNX2-201ENST00000359524 DDX10Q13206 875 aaKnown RBP22.29■■□□□ 1.16
RUNX2-201ENST00000359524 MRS2Q9HD23 443 aa22.27■■□□□ 1.16
RUNX2-201ENST00000359524 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
RUNX2-201ENST00000359524 TNNT2P45379 298 aaPredicted RBP22.26■■□□□ 1.15
RUNX2-201ENST00000359524 TRIM44Q96DX7 344 aaPredicted RBP22.25■■□□□ 1.15
RUNX2-201ENST00000359524 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
RUNX2-201ENST00000359524 CDCA8Q53HL2 280 aa22.22■■□□□ 1.15
RUNX2-201ENST00000359524 EIF4G2P78344 907 aaKnown RBP eCLIP22.18■■□□□ 1.14
RUNX2-201ENST00000359524 CASC1Q6TDU7 716 aa22.18■■□□□ 1.14
RUNX2-201ENST00000359524 CHMP4BQ9H444 224 aaKnown RBP22.17■■□□□ 1.14
RUNX2-201ENST00000359524 ZRSR1Q15695 479 aaKnown RBP22.16■■□□□ 1.14
RUNX2-201ENST00000359524 CFAP53Q96M91 514 aa22.15■■□□□ 1.14
RUNX2-201ENST00000359524 MTUS2Q5JR59 1369 aa22.15■■□□□ 1.14
RUNX2-201ENST00000359524 PPM1GO15355 546 aaPredicted RBP22.14■■□□□ 1.13
RUNX2-201ENST00000359524 NBR1Q14596 966 aa22.1■■□□□ 1.13
RUNX2-201ENST00000359524 ERICH6BQ5W0A0 696 aa22.08■■□□□ 1.13
RUNX2-201ENST00000359524 CUX2O14529 1486 aa22.07■■□□□ 1.12
RUNX2-201ENST00000359524 SALL2Q9Y467 1007 aaPredicted RBP22.05■■□□□ 1.12
RUNX2-201ENST00000359524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.12
RUNX2-201ENST00000359524 MS4A1P11836 297 aa22.04■■□□□ 1.12
RUNX2-201ENST00000359524 GOLGA6L6A8MZA4 724 aa22.02■■□□□ 1.11
RUNX2-201ENST00000359524 CHMP7Q8WUX9 453 aaPredicted RBP22.01■■□□□ 1.11
RUNX2-201ENST00000359524 PTMAP06454 111 aaKnown RBP22■■□□□ 1.11
RUNX2-201ENST00000359524 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
RUNX2-201ENST00000359524 NRDCO43847 1150 aa21.99■■□□□ 1.11
RUNX2-201ENST00000359524 CHIC2Q9UKJ5 165 aa21.98■■□□□ 1.11
RUNX2-201ENST00000359524 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
RUNX2-201ENST00000359524 CFAP44Q96MT7 982 aa21.96■■□□□ 1.11
RUNX2-201ENST00000359524 KDM2AQ9Y2K7 1162 aa21.95■■□□□ 1.1
RUNX2-201ENST00000359524 PPP1R15AO75807 674 aaPredicted RBP21.94■■□□□ 1.1
RUNX2-201ENST00000359524 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
RUNX2-201ENST00000359524 PNNQ9H307 717 aaKnown RBP21.93■■□□□ 1.1
RUNX2-201ENST00000359524 NUDCQ9Y266 331 aa21.92■■□□□ 1.1
RUNX2-201ENST00000359524 KNSTRNQ9Y448 316 aa21.91■■□□□ 1.1
RUNX2-201ENST00000359524 ARXQ96QS3 562 aa21.91■■□□□ 1.1
RUNX2-201ENST00000359524 VPS8Q8N3P4 1428 aa21.88■■□□□ 1.09
RUNX2-201ENST00000359524 FTSJ3Q8IY81 847 aaKnown RBP21.88■■□□□ 1.09
RUNX2-201ENST00000359524 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
RUNX2-201ENST00000359524 DNTTIP2Q5QJE6 756 aaKnown RBP21.86■■□□□ 1.09
RUNX2-201ENST00000359524 MAPK8IP3Q9UPT6 1336 aa21.84■■□□□ 1.09
RUNX2-201ENST00000359524 L1TD1Q5T7N2 865 aaKnown RBP21.83■■□□□ 1.09
RUNX2-201ENST00000359524 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.09
RUNX2-201ENST00000359524 ERCC6Q03468 1493 aa21.83■■□□□ 1.08
RUNX2-201ENST00000359524 PPP4R2Q9NY27 417 aa21.81■■□□□ 1.08
RUNX2-201ENST00000359524 NCAPD3P42695 1498 aa21.81■■□□□ 1.08
RUNX2-201ENST00000359524 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
RUNX2-201ENST00000359524 RAPGEF2Q9Y4G8 1499 aa21.8■■□□□ 1.08
RUNX2-201ENST00000359524 HAP1P54257 671 aaPredicted RBP21.8■■□□□ 1.08
RUNX2-201ENST00000359524 MIER1Q8N108 512 aa21.8■■□□□ 1.08
RUNX2-201ENST00000359524 FHAD1B1AJZ9 1412 aa21.76■■□□□ 1.07
RUNX2-201ENST00000359524 PTMSP20962 102 aa21.76■■□□□ 1.07
RUNX2-201ENST00000359524 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
RUNX2-201ENST00000359524 C14orf37Q86TY3 774 aa21.75■■□□□ 1.07
RUNX2-201ENST00000359524 CHAF1AQ13111 956 aaPredicted RBP21.74■■□□□ 1.07
RUNX2-201ENST00000359524 TIMELESSQ9UNS1 1208 aa21.73■■□□□ 1.07
RUNX2-201ENST00000359524 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
RUNX2-201ENST00000359524 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
RUNX2-201ENST00000359524 BICRAQ9NZM4 1560 aa21.72■■□□□ 1.07
RUNX2-201ENST00000359524 A0A0G2JS52 829 aa21.7■■□□□ 1.06
RUNX2-201ENST00000359524 RRP7BPQ9NSQ0 103 aa21.7■■□□□ 1.06
RUNX2-201ENST00000359524 FANCD2Q9BXW9 1451 aa21.69■■□□□ 1.06
RUNX2-201ENST00000359524 CARD11Q9BXL7 1154 aa21.69■■□□□ 1.06
RUNX2-201ENST00000359524 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
RUNX2-201ENST00000359524 MCCP23508 829 aa21.68■■□□□ 1.06
RUNX2-201ENST00000359524 HSP90AB1P08238 724 aaKnown RBP21.68■■□□□ 1.06
RUNX2-201ENST00000359524 IRX6P78412 446 aaPredicted RBP21.68■■□□□ 1.06
RUNX2-201ENST00000359524 ZBTB7CA1YPR0 619 aa21.65■■□□□ 1.06
RUNX2-201ENST00000359524 NAP1L5Q96NT1 182 aaPredicted RBP21.65■■□□□ 1.06
RUNX2-201ENST00000359524 NOP58Q9Y2X3 529 aaKnown RBP21.65■■□□□ 1.06
RUNX2-201ENST00000359524 FGD1P98174 961 aa21.64■■□□□ 1.06
RUNX2-201ENST00000359524 GOLGA6L4A6NEF3 574 aa21.64■■□□□ 1.05
RUNX2-201ENST00000359524 CFDP1Q9UEE9 299 aaPredicted RBP21.64■■□□□ 1.05
RUNX2-201ENST00000359524 PRKCSHP14314 528 aaPredicted RBP21.63■■□□□ 1.05
RUNX2-201ENST00000359524 HDGFP51858 240 aaKnown RBP21.63■■□□□ 1.05
RUNX2-201ENST00000359524 HSCBQ8IWL3 235 aa21.63■■□□□ 1.05
RUNX2-201ENST00000359524 CHMP4AQ9BY43 222 aa21.62■■□□□ 1.05
RUNX2-201ENST00000359524 OS9Q13438 667 aaPredicted RBP21.59■■□□□ 1.05
RUNX2-201ENST00000359524 KCNJ4P48050 445 aa21.58■■□□□ 1.05
RUNX2-201ENST00000359524 POGKQ9P215 609 aa21.57■■□□□ 1.04
RUNX2-201ENST00000359524 SUPT16HQ9Y5B9 1047 aaKnown RBP21.56■■□□□ 1.04
RUNX2-201ENST00000359524 SYNJ1O43426 1573 aa21.55■■□□□ 1.04
RUNX2-201ENST00000359524 TMF1P82094 1093 aa21.55■■□□□ 1.04
RUNX2-201ENST00000359524 MSNP26038 577 aaKnown RBP21.55■■□□□ 1.04
RUNX2-201ENST00000359524 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
RUNX2-201ENST00000359524 RGL3Q3MIN7 710 aa21.54■■□□□ 1.04
RUNX2-201ENST00000359524 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms